Re: [Ifeffit] difference spectra function in (D)Athena

2012-04-12 Thread Bruce Ravel
On Wednesday, April 11, 2012 04:01:06 pm Christopher Patridge wrote:
> If it helps to diagnose and fix the bug, I just applied the E shifts found
> after reference calibration to the difference spectra and it fixed the
> problem.

Chris,

You assessment was spot on.  The energy shifts (and a few other
things) were being handled incorrectly in the difference spectrum.

The next release of Demeter will fix that problem.  The difference
spectrum page in Athena will still only have limited functionality,
but at least what it has should work correctly.

Thanks,
B

-- 

 Bruce Ravel   bra...@bnl.gov

 National Institute of Standards and Technology
 Synchrotron Methods Group at NSLS --- Beamlines U7A, X24A, X23A2
 Building 535A
 Upton NY, 11973

 My homepage:http://xafs.org/BruceRavel
 EXAFS software: http://cars9.uchicago.edu/ifeffit/Demeter
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Re: [Ifeffit] difference spectra function in (D)Athena

2012-04-11 Thread Christopher Patridge
If it helps to diagnose and fix the bug, I just applied the E shifts found
after reference calibration to the difference spectra and it fixed the
problem.

thanks for the quick response,

Chris

On Wed, Apr 11, 2012 at 11:36 AM, Ravel, Bruce  wrote:

>
> Hi Chris,
>
> Thanks for the bug report -- that is clearly a problem.  I'll look into it
> and get back to you.
>
> B
>
> 
> From: ifeffit-boun...@millenia.cars.aps.anl.gov [
> ifeffit-boun...@millenia.cars.aps.anl.gov] on behalf of Christopher
> Patridge [patri...@buffalo.edu]
> Sent: Wednesday, April 11, 2012 10:39 AM
> To: XAFS Analysis using Ifeffit
> Subject: [Ifeffit] difference spectra function in (D)Athena
>
> Hello Mailing List,
>
> I have a question about the difference spectrum function.  I chose
> difference spectrum in norm mu(E) in the Demeter pull down menu.  I set the
> standard and chose another spectrum.  Plotting both the difference and
> spectra gives me the image attached.  Is the difference shifted
> significantly to lower energy?  If so, why does it change its energy scale
> relative to the plotted spectra?  Is there a setting I can change or could
> this be a small bug?
>
> Thank you all,
>
> buena salud,
>
> Chris Patridge
>
> --
> Christopher J. Patridge PhD.
> Contact: (315)-529-0501
>
>
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>



-- 
Christopher J. Patridge PhD.
Contact: (315)-529-0501
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Re: [Ifeffit] difference spectra function in (D)Athena

2012-04-11 Thread Ravel, Bruce

Hi Chris,

Thanks for the bug report -- that is clearly a problem.  I'll look into it and 
get back to you.

B


From: ifeffit-boun...@millenia.cars.aps.anl.gov 
[ifeffit-boun...@millenia.cars.aps.anl.gov] on behalf of Christopher Patridge 
[patri...@buffalo.edu]
Sent: Wednesday, April 11, 2012 10:39 AM
To: XAFS Analysis using Ifeffit
Subject: [Ifeffit] difference spectra function in (D)Athena

Hello Mailing List,

I have a question about the difference spectrum function.  I chose difference 
spectrum in norm mu(E) in the Demeter pull down menu.  I set the standard and 
chose another spectrum.  Plotting both the difference and spectra gives me the 
image attached.  Is the difference shifted significantly to lower energy?  If 
so, why does it change its energy scale relative to the plotted spectra?  Is 
there a setting I can change or could this be a small bug?

Thank you all,

buena salud,

Chris Patridge

--
Christopher J. Patridge PhD.
Contact: (315)-529-0501


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