RE: [Ifeffit] Is there a physical meaning to a negative SO2

2007-01-09 Thread Anatoly Frenkel
A totally unrelated joke: If anyone ever watched Da Ali G show on HBO,
there was an episode, when Ali G interviews a famous economics professor.
The first question was: Professor, what is a PIN code?

A.

  -Original Message-
  From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] Behalf Of Todd Luxton
  Sent: Tuesday, January 09, 2007 10:41 AM
  To: 'XAFS Analysis using Ifeffit'
  Subject: [Ifeffit] Is there a physical meaning to a negative SO2


  I am very new to XAFS analysis, I am wondering if there is a physical
meaning to a negative value for SO2.  Based on the XAFS equation I can't
understand what the physical significance of a negative SO2 value would be,
therefore I am assuming that my modeling results using Athena are not
representative of a physically realistic model due to the negative value
calculated fro SO2 or more specifically the amp variable in the guess set.
Any insight would be greatly appreciated.



  thanks
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Re: [Ifeffit] Is there a physical meaning to a negative SO2

2007-01-09 Thread Scott Calvin

Hi Todd,

Your paragraph below is correct; i.e. you do not have a physically 
realistic model. One common cause of a negative S02 is that the model 
also is off by half an oscillation. After all, the negative S02 turns 
the signal upside down, shifting it by half an oscillation can then 
cause a rough (but spurious) alignment between model and data.


In any case, the model needs work; depending on your system and 
degree of prior knowledge, you might be assuming the wrong species of 
scattering atom, for example.


--Scott Calvin
Sarah Lawrence College

At 10:41 AM 1/9/2007, Todd Luxton wrote:
I am very new to XAFS analysis, I am wondering if there is a 
physical meaning to a negative value for SO2.  Based on the XAFS 
equation I can't understand what the physical significance of a 
negative SO2 value would be, therefore I am assuming that my 
modeling results using Athena are not representative of a physically 
realistic model due to the negative value calculated fro SO2 or more 
specifically the amp variable in the guess set.  Any insight would 
be greatly appreciated.





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RE: [Ifeffit] Is there a physical meaning to a negative SO2

2007-01-09 Thread Kelly, Shelly D.
Hi Todd,

One thing to try is to set s02 to a positive value and all the other
variables to reasonable values and then look at the real or imaginary
parts of the Fourier transform and also look at the chi(k) spectra.  You
should see the affect that Scott mentioned.

Shelly


 -Original Message-
 From: [EMAIL PROTECTED] [mailto:ifeffit-
 [EMAIL PROTECTED] On Behalf Of Scott Calvin
 Sent: Tuesday, January 09, 2007 10:27 AM
 To: 'XAFS Analysis using Ifeffit'
 Subject: Re: [Ifeffit] Is there a physical meaning to a negative SO2
 
 Hi Todd,
 
 Your paragraph below is correct; i.e. you do not have a physically
 realistic model. One common cause of a negative S02 is that the model
 also is off by half an oscillation. After all, the negative S02 turns
 the signal upside down, shifting it by half an oscillation can then
 cause a rough (but spurious) alignment between model and data.
 
 In any case, the model needs work; depending on your system and
 degree of prior knowledge, you might be assuming the wrong species of
 scattering atom, for example.
 
 --Scott Calvin
 Sarah Lawrence College
 
 At 10:41 AM 1/9/2007, Todd Luxton wrote:
 I am very new to XAFS analysis, I am wondering if there is a
 physical meaning to a negative value for SO2.  Based on the XAFS
 equation I can't understand what the physical significance of a
 negative SO2 value would be, therefore I am assuming that my
 modeling results using Athena are not representative of a physically
 realistic model due to the negative value calculated fro SO2 or more
 specifically the amp variable in the guess set.  Any insight would
 be greatly appreciated.
 
 
 
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 Ifeffit mailing list
 Ifeffit@millenia.cars.aps.anl.gov
 http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit

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