[jira] [Created] (AIRAVATA-2652) Remove registry-core dependency on orchestrator and gfac modules
Sachin Kariyattin created AIRAVATA-2652: --- Summary: Remove registry-core dependency on orchestrator and gfac modules Key: AIRAVATA-2652 URL: https://issues.apache.org/jira/browse/AIRAVATA-2652 Project: Airavata Issue Type: Improvement Components: Airavata Orchestrator, GFac, Registry API Reporter: Sachin Kariyattin Assignee: Sachin Kariyattin Fix For: 0.18 Refactor orchestrator and gfac modules to use registry-api instead of the existing registry-core dependency * Some of the Experiment Catalog methods used by the orchestrator and gfac are not present in the RegistryServerHandler. ex: _experimentCatalog.add(ExpCatChildDataType.EXPERIMENT_ERROR, details, experimentId);_ Some new methods related to experiment (ERROR, TASK, PROCESS etc) need to be created in the RegistryServerHandler. -- This message was sent by Atlassian JIRA (v7.6.3#76005)
[jira] [Created] (AIRAVATA-2651) Add method to get all accessible applications for a user
Sneha Tilak created AIRAVATA-2651: - Summary: Add method to get all accessible applications for a user Key: AIRAVATA-2651 URL: https://issues.apache.org/jira/browse/AIRAVATA-2651 Project: Airavata Issue Type: Bug Components: Airavata API Reporter: Sneha Tilak Assignee: Sneha Tilak -- This message was sent by Atlassian JIRA (v7.6.3#76005)
[jira] [Created] (AIRAVATA-2650) Use ThriftClientPool in Profile Service
Marcus Christie created AIRAVATA-2650: - Summary: Use ThriftClientPool in Profile Service Key: AIRAVATA-2650 URL: https://issues.apache.org/jira/browse/AIRAVATA-2650 Project: Airavata Issue Type: Bug Reporter: Marcus Christie We should use client pools and make sure clients are checked back into pool at the end of requests. -- This message was sent by Atlassian JIRA (v7.6.3#76005)
[jira] [Commented] (AIRAVATA-2627) Letsencrypt auto renewal is preventing Apache from restarting
[
https://issues.apache.org/jira/browse/AIRAVATA-2627?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16338145#comment-16338145
]
Marcus Christie commented on AIRAVATA-2627:
---
Ran these commands on pgadev.scigap.org as well.
> Letsencrypt auto renewal is preventing Apache from restarting
> -
>
> Key: AIRAVATA-2627
> URL: https://issues.apache.org/jira/browse/AIRAVATA-2627
> Project: Airavata
> Issue Type: Bug
> Components: PGA PHP Web Gateway
>Reporter: Marcus Christie
>Assignee: Marcus Christie
>Priority: Major
>
> The {{certbot renew --quiet}} command in the crontab is apparently causing
> Apache to fail to reload:
> From the systemd journal ({{journalctl -xe}}):
> {noformat}
> -- Unit session-34124.scope has begun starting up.
> Jan 09 12:50:01 gridfarm004.ucs.indiana.edu CROND[11610]: (root) CMD
> (/usr/lib64/sa/sa1 1 1)
> Jan 09 12:52:01 gridfarm004.ucs.indiana.edu systemd[1]: Started Session 34125
> of user root.
> -- Subject: Unit session-34125.scope has finished start-up
> -- Defined-By: systemd
> -- Support: http://lists.freedesktop.org/mailman/listinfo/systemd-devel
> --
> -- Unit session-34125.scope has finished starting up.
> --
> -- The start-up result is done.
> Jan 09 12:52:01 gridfarm004.ucs.indiana.edu systemd[1]: Starting Session
> 34125 of user root.
> -- Subject: Unit session-34125.scope has begun start-up
> -- Defined-By: systemd
> -- Support: http://lists.freedesktop.org/mailman/listinfo/systemd-devel
> --
> -- Unit session-34125.scope has begun starting up.
> Jan 09 12:52:01 gridfarm004.ucs.indiana.edu CROND[11692]: (root) CMD
> (/usr/bin/certbot renew --quiet)
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu httpd[11725]: AH00112: Warning:
> DocumentRoot [/www/default] does not exist
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu httpd[11725]: AH00526: Syntax
> error on line 10 of /etc/httpd/conf.d/le_tls_sni_01_cert_challenge.conf:
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu httpd[11725]: SSLCertificateFile:
> file '/var/lib/letsencrypt/YDnHNU3oKDOaT_oO2qXSoXR65gUb7k66KB0dF4nwT-8.crt'
> does not exist or is empty
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu systemd[1]: httpd.service:
> control process exited, code=exited status=1
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu systemd[1]: Reload failed for The
> Apache HTTP Server.
> -- Subject: Unit httpd.service has finished reloading its configuration
> -- Defined-By: systemd
> -- Support: http://lists.freedesktop.org/mailman/listinfo/systemd-devel
> --
> -- Unit httpd.service has finished reloading its configuration
> --
> -- The result is failed.
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu httpd[11735]: AH00112: Warning:
> DocumentRoot [/www/default] does not exist
> Jan 09 12:52:03 gridfarm004.ucs.indiana.edu systemd[1]: Reloaded The Apache
> HTTP Server.
> -- Subject: Unit httpd.service has finished reloading its configuration
> -- Defined-By: systemd
> -- Support: http://lists.freedesktop.org/mailman/listinfo/systemd-devel
> --
> -- Unit httpd.service has finished reloading its configuration
> --
> -- The result is done.
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu httpd[11757]: AH00112: Warning:
> DocumentRoot [/www/default] does not exist
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu httpd[11757]: AH00526: Syntax
> error on line 10 of /etc/httpd/conf.d/le_tls_sni_01_cert_challenge.conf:
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu httpd[11757]: SSLCertificateFile:
> file '/var/lib/letsencrypt/9qLZfLerTerU_bGLYPfXWXq-EXktXgYfNQAEQcdHSpE.crt'
> does not exist or is empty
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu systemd[1]: httpd.service:
> control process exited, code=exited status=1
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu systemd[1]: Reload failed for The
> Apache HTTP Server.
> -- Subject: Unit httpd.service has finished reloading its configuration
> -- Defined-By: systemd
> -- Support: http://lists.freedesktop.org/mailman/listinfo/systemd-devel
> --
> -- Unit httpd.service has finished reloading its configuration
> --
> -- The result is failed.
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu httpd[11767]: AH00112: Warning:
> DocumentRoot [/www/default] does not exist
> Jan 09 12:52:05 gridfarm004.ucs.indiana.edu systemd[1]: Reloaded The Apache
> HTTP Server.
> -- Subject: Unit httpd.service has finished reloading its configuration
> -- Defined-By: systemd
> -- Support: http://lists.freedesktop.org/mailman/listinfo/systemd-devel
> --
> -- Unit httpd.service has finished reloading its configuration
> --
> -- The result is done.
> Jan 09 12:52:07 gridfarm004.ucs.indiana.edu httpd[11796]: AH00112: Warning:
> DocumentRoot [/www/default] does not exist
> Jan 09 12:52:07 gridfarm004.ucs.indiana.edu httpd[11796]: AH00526: Syntax
> error on line 10 of
[jira] [Commented] (AIRAVATA-2625) Derive and present Text outputs in Experiment summary
[ https://issues.apache.org/jira/browse/AIRAVATA-2625?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16338084#comment-16338084 ] Dimuthu Upeksha commented on AIRAVATA-2625: --- This is might require few changes to output data staging task and there are few restrictions. Because we need to read the file to extract the values, we need to read the file content to the JVM heap. Risk of that is, if we read a large file (several gigs) into the heap, it will cause OOM error and eventually the whole JVM might crash. So we have to come up with a reasonable size cap for the files that are scanned (2 - 5 MB?) and if the file is larger than that, we simply ignore the file and notify the user that output file is too big to scan. > Derive and present Text outputs in Experiment summary > - > > Key: AIRAVATA-2625 > URL: https://issues.apache.org/jira/browse/AIRAVATA-2625 > Project: Airavata > Issue Type: Bug > Components: Airavata System >Affects Versions: 0.18 >Reporter: Eroma >Assignee: Suresh Marru >Priority: Major > > Currently the available application outputs are in the form of stdout, stderr > and URI (files). Going forward to have text (String, Integer, Float) outputs > directly in the experiment summary. > These text outputs to be displayed as key+value pairs and when defining > should be defined a file to derive from, e.g. stdout > At a given time from a single file one or many of these key+value pairs could > be derived. Also gateway admin can define multiple files to derive multiple > of these values. > These would be displayed to user in experiment summary and in detailed > experiment summary in admin dashboard experiment statistics. > These should also be displayed to any other gateway user it is shared with. -- This message was sent by Atlassian JIRA (v7.6.3#76005)
[jira] [Updated] (AIRAVATA-2615) Experiment view page
[ https://issues.apache.org/jira/browse/AIRAVATA-2615?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marcus Christie updated AIRAVATA-2615: -- Description: TODO * (/) Load the Experiment model data together with the Project data, input and output DataProducts, ApplicationModule and ComputeResourceDescription (what I'm calling a FullExperiment) * If the experiment isn't completed or failed, poll the experiment was: TODO * Load the Experiment model data together with the Project data, input and output DataProducts, ApplicationModule and ComputeResourceDescription (what I'm calling a FullExperiment) > Experiment view page > > > Key: AIRAVATA-2615 > URL: https://issues.apache.org/jira/browse/AIRAVATA-2615 > Project: Airavata > Issue Type: Sub-task >Reporter: Marcus Christie >Assignee: Marcus Christie >Priority: Major > > TODO > * (/) Load the Experiment model data together with the Project data, input > and output DataProducts, ApplicationModule and ComputeResourceDescription > (what I'm calling a FullExperiment) > * If the experiment isn't completed or failed, poll the experiment -- This message was sent by Atlassian JIRA (v7.6.3#76005)
[jira] [Updated] (AIRAVATA-2615) Experiment view page
[ https://issues.apache.org/jira/browse/AIRAVATA-2615?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marcus Christie updated AIRAVATA-2615: -- Description: TODO * Load the Experiment model data together with the Project data, input and output DataProducts, ApplicationModule and ComputeResourceDescription (what I'm calling a FullExperiment) > Experiment view page > > > Key: AIRAVATA-2615 > URL: https://issues.apache.org/jira/browse/AIRAVATA-2615 > Project: Airavata > Issue Type: Sub-task >Reporter: Marcus Christie >Assignee: Marcus Christie >Priority: Major > > TODO > * Load the Experiment model data together with the Project data, input and > output DataProducts, ApplicationModule and ComputeResourceDescription (what > I'm calling a FullExperiment) -- This message was sent by Atlassian JIRA (v7.6.3#76005)
[jira] [Assigned] (AIRAVATA-2386) Fix issues with email monitoring
[ https://issues.apache.org/jira/browse/AIRAVATA-2386?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma reassigned AIRAVATA-2386: --- Assignee: Dimuthu Upeksha > Fix issues with email monitoring > > > Key: AIRAVATA-2386 > URL: https://issues.apache.org/jira/browse/AIRAVATA-2386 > Project: Airavata > Issue Type: Task > Components: Airavata System, GFac >Affects Versions: 0.17 >Reporter: Eroma >Assignee: Dimuthu Upeksha >Priority: Major > Fix For: 0.18 > > Attachments: jobstatus.ps > > > There are few issues with email monitoring and the task is to collect them > and fix. -- This message was sent by Atlassian JIRA (v7.6.3#76005)
