Dimuthu Upeksha created AIRAVATA-2940: -----------------------------------------
Summary: Sporadic JPA errors when invoking Registry Server APIs Key: AIRAVATA-2940 URL: https://issues.apache.org/jira/browse/AIRAVATA-2940 Project: Airavata Issue Type: Bug Components: Registry API Affects Versions: 0.17 Environment: staging Reporter: Dimuthu Upeksha Assignee: Dimuthu Upeksha This issue occurs randomly at different registry components. It seems like a general JPA bug or a misuse of JPA APIs in registry code. 2018-11-10 18:29:28,003 [pool-10-thread-208241] ERROR o.a.a.r.c.a.c.i.ApplicationDeploymentImpl - Error while retrieving application deployment... org.apache.airavata.registry.cpi.AppCatalogException: <openjpa-2.2.0-r422266:1244990 fatal user error> org.apache.openjpa.persistence.InvalidStateException: The context has been closed. The stack trace at which the context was closed is available if Runtime=TRACE logging is enabled. at org.apache.airavata.registry.core.app.catalog.resources.LibraryApendPathResource.get(LibraryApendPathResource.java:214) at org.apache.airavata.registry.core.app.catalog.util.AppCatalogThriftConversion.getApplicationDeploymentDescription(AppCatalogThriftConversion.java:758) at org.apache.airavata.registry.core.app.catalog.impl.ApplicationDeploymentImpl.getApplicationDeployement(ApplicationDeploymentImpl.java:326) at org.apache.airavata.registry.api.service.handler.RegistryServerHandler.getApplicationDeployment(RegistryServerHandler.java:1211) at org.apache.airavata.registry.api.RegistryService$Processor$getApplicationDeployment.getResult(RegistryService.java:14835) at org.apache.airavata.registry.api.RegistryService$Processor$getApplicationDeployment.getResult(RegistryService.java:14819) at org.apache.thrift.ProcessFunction.process(ProcessFunction.java:39) at org.apache.thrift.TBaseProcessor.process(TBaseProcessor.java:39) at org.apache.thrift.server.TThreadPoolServer$WorkerProcess.run(TThreadPoolServer.java:286) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:748) Caused by: org.apache.openjpa.persistence.InvalidStateException: The context has been closed. The stack trace at which the context was closed is available if Runtime=TRACE logging is enabled. at org.apache.openjpa.kernel.BrokerImpl.assertOpen(BrokerImpl.java:4676) at org.apache.openjpa.kernel.BrokerImpl.beginOperation(BrokerImpl.java:1930) at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1503) at org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933) at org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570) at org.apache.airavata.registry.core.app.catalog.resources.LibraryApendPathResource.get(LibraryApendPathResource.java:205) ... 11 common frames omitted 2018-11-10 18:29:28,003 [pool-10-thread-208241] ERROR o.a.a.r.a.s.h.RegistryServerHandler - comet.sdsc.edu_Ultrascan_0091a13a-1fe5-41cf-8708-79a987e3021a org.apache.airavata.registry.cpi.AppCatalogException: org.apache.airavata.registry.cpi.AppCatalogException: <openjpa-2.2.0-r422266:1244990 fatal user error> org.apache.openjpa.persistence.InvalidStateException: The context has been closed. The stack trace at which the context was closed is available if Runtime=TRACE logging is enabled. at org.apache.airavata.registry.core.app.catalog.impl.ApplicationDeploymentImpl.getApplicationDeployement(ApplicationDeploymentImpl.java:329) at org.apache.airavata.registry.api.service.handler.RegistryServerHandler.getApplicationDeployment(RegistryServerHandler.java:1211) at org.apache.airavata.registry.api.RegistryService$Processor$getApplicationDeployment.getResult(RegistryService.java:14835) at org.apache.airavata.registry.api.RegistryService$Processor$getApplicationDeployment.getResult(RegistryService.java:14819) at org.apache.thrift.ProcessFunction.process(ProcessFunction.java:39) at org.apache.thrift.TBaseProcessor.process(TBaseProcessor.java:39) at org.apache.thrift.server.TThreadPoolServer$WorkerProcess.run(TThreadPoolServer.java:286) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:748) Caused by: org.apache.airavata.registry.cpi.AppCatalogException: <openjpa-2.2.0-r422266:1244990 fatal user error> org.apache.openjpa.persistence.InvalidStateException: The context has been closed. The stack trace at which the context was closed is available if Runtime=TRACE logging is enabled. at org.apache.airavata.registry.core.app.catalog.resources.LibraryApendPathResource.get(LibraryApendPathResource.java:214) at org.apache.airavata.registry.core.app.catalog.util.AppCatalogThriftConversion.getApplicationDeploymentDescription(AppCatalogThriftConversion.java:758) at org.apache.airavata.registry.core.app.catalog.impl.ApplicationDeploymentImpl.getApplicationDeployement(ApplicationDeploymentImpl.java:326) ... 9 common frames omitted Caused by: org.apache.openjpa.persistence.InvalidStateException: The context has been closed. The stack trace at which the context was closed is available if Runtime=TRACE logging is enabled. at org.apache.openjpa.kernel.BrokerImpl.assertOpen(BrokerImpl.java:4676) at org.apache.openjpa.kernel.BrokerImpl.beginOperation(BrokerImpl.java:1930) at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1503) at org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933) at org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570) at org.apache.airavata.registry.core.app.catalog.resources.LibraryApendPathResource.get(LibraryApendPathResource.java:205) ... 11 common frames omitted 2018-11-10 18:29:28,144 [pool-30-thread-3] INFO o.a.a.o.s.OrchestratorServerHandler - expId: US3-ADEV_5b40ecc5-7aea-4b42-affc-9a3c6ff7d82c, processId: PROCESS_0fccaaab-7494-4ae7-a1bc-23a0ffd67b8d :- Process status changed event received for status FAILED -- This message was sent by Atlassian JIRA (v7.6.3#76005)