[jira] [Updated] (CONFIGURATION-496) Excessive Synchronization AbstractFileConfiguration

2012-05-08 Thread Tim Canavan (JIRA)

 [ 
https://issues.apache.org/jira/browse/CONFIGURATION-496?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Tim Canavan updated CONFIGURATION-496:
--

Description: 
We are having a problem with commons configuration 1.6 
AbstractFileConfiguration 

During a stress test we are seeing that we have wait locks against this method 
causing this method not to complete for up to one second.

We are using the FileReloadStrategy delegate which makes a check on the file 
system when now + interval is greater than the compare time.

Why can't we make this check before the synchronized block thus increasing 
throughput. I have noticed in 1.8 that the caller to this method is 
synchronized. This seems like excessive synchronization. Any ideas how to solve 
this. 

{code}
public void reload()
{
synchronized (reloadLock)
{
if (noReload == 0)
{
try
{
enterNoReload(); // avoid reentrant calls

if (strategy.reloadingRequired())
{
if (getLogger().isInfoEnabled())
{
getLogger().info(Reloading configuration. URL is  
+ getURL());
}
fireEvent(EVENT_RELOAD, null, getURL(), true);
setDetailEvents(false);
boolean autoSaveBak = this.isAutoSave(); // save the 
current state
this.setAutoSave(false); // deactivate autoSave to 
prevent information loss
try
{
clear();
load();
}
finally
{
this.setAutoSave(autoSaveBak); // set autoSave to 
previous value
setDetailEvents(true);
}
fireEvent(EVENT_RELOAD, null, getURL(), false);

// notify the strategy
strategy.reloadingPerformed();
}
}
catch (Exception e)
{
fireError(EVENT_RELOAD, null, null, e);
// todo rollback the changes if the file can't be reloaded
}
finally
{
exitNoReload();
}
}
}
}

{code}

  was:
We are having a problem with commons configuration 1.6 
AbstractFileConfiguration 

During a stress test we are seeing that we have wait locks against this method 
causing this method not to complete for up to one second.

We are using the FileReloadStrategy delegate which makes a check on the file 
system when now + interval is greater than the compare time.

Why can't we make this check before the synchronized block thus increasing 
throughput. I have noticed in 1.8 that the caller to this method is 
synchronized. This seems like excessive synchronization. Any ideas how to solve 
this. 

public void reload()
{
synchronized (reloadLock)
{
if (noReload == 0)
{
try
{
enterNoReload(); // avoid reentrant calls

if (strategy.reloadingRequired())
{
if (getLogger().isInfoEnabled())
{
getLogger().info(Reloading configuration. URL is  
+ getURL());
}
fireEvent(EVENT_RELOAD, null, getURL(), true);
setDetailEvents(false);
boolean autoSaveBak = this.isAutoSave(); // save the 
current state
this.setAutoSave(false); // deactivate autoSave to 
prevent information loss
try
{
clear();
load();
}
finally
{
this.setAutoSave(autoSaveBak); // set autoSave to 
previous value
setDetailEvents(true);
}
fireEvent(EVENT_RELOAD, null, getURL(), false);

// notify the strategy
strategy.reloadingPerformed();
}
}
catch (Exception e)
{
fireError(EVENT_RELOAD, null, null, e);
// todo rollback the changes if the file can't be reloaded
}
finally
{
exitNoReload();
}
}
}
}


 Excessive Synchronization AbstractFileConfiguration
 

[jira] [Commented] (CONFIGURATION-496) Excessive Synchronization AbstractFileConfiguration

2012-05-08 Thread Ralph Goers (JIRA)

[ 
https://issues.apache.org/jira/browse/CONFIGURATION-496?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13270831#comment-13270831
 ] 

Ralph Goers commented on CONFIGURATION-496:
---

There is no simple answer to your question. Commons Configuration used to not 
be thread-safe. Unfortunately, I discovered that after our application was 
already in production. My use case deals with DefaultConfigurationBuilder 
constructing DynamicCombinedConfigurations and XMLConfigurations all with file 
reloading.  Due to the way CombinedConfigurations work every time a 
configuration file was reloaded other configurations that shared the common 
file were corrupted.

Unfortunately, you can't check to see if a reload is required without holding 
the lock or multiple threads will end up performing the reload. 

All of this was put into place while the minimum version was Java 1.4. Now that 
it is Java 5 much of this code can be redone to take advantage of 
java.util.concurrent. I just haven't gotten to it. However, I've had reports of 
similar issues from my users so I plan to  address these issues in the very 
near future.

 Excessive Synchronization AbstractFileConfiguration
 ---

 Key: CONFIGURATION-496
 URL: https://issues.apache.org/jira/browse/CONFIGURATION-496
 Project: Commons Configuration
  Issue Type: Bug
  Components: File reloading
Affects Versions: 1.6, 1.7, 1.8
Reporter: Tim Canavan

 We are having a problem with commons configuration 1.6 
 AbstractFileConfiguration 
 During a stress test we are seeing that we have wait locks against this 
 method causing this method not to complete for up to one second.
 We are using the FileReloadStrategy delegate which makes a check on the file 
 system when now + interval is greater than the compare time.
 Why can't we make this check before the synchronized block thus increasing 
 throughput. I have noticed in 1.8 that the caller to this method is 
 synchronized. This seems like excessive synchronization. Any ideas how to 
 solve this. 
 {code}
 public void reload()
 {
 synchronized (reloadLock)
 {
 if (noReload == 0)
 {
 try
 {
 enterNoReload(); // avoid reentrant calls
 if (strategy.reloadingRequired())
 {
 if (getLogger().isInfoEnabled())
 {
 getLogger().info(Reloading configuration. URL is 
  + getURL());
 }
 fireEvent(EVENT_RELOAD, null, getURL(), true);
 setDetailEvents(false);
 boolean autoSaveBak = this.isAutoSave(); // save the 
 current state
 this.setAutoSave(false); // deactivate autoSave to 
 prevent information loss
 try
 {
 clear();
 load();
 }
 finally
 {
 this.setAutoSave(autoSaveBak); // set autoSave to 
 previous value
 setDetailEvents(true);
 }
 fireEvent(EVENT_RELOAD, null, getURL(), false);
 // notify the strategy
 strategy.reloadingPerformed();
 }
 }
 catch (Exception e)
 {
 fireError(EVENT_RELOAD, null, null, e);
 // todo rollback the changes if the file can't be reloaded
 }
 finally
 {
 exitNoReload();
 }
 }
 }
 }
 {code}

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[jira] [Updated] (MATH-753) Better implementation for the gamma distribution density function

2012-05-08 Thread JIRA

 [ 
https://issues.apache.org/jira/browse/MATH-753?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Sébastien Brisard updated MATH-753:
---

Attachment: lanczos.patch

{{lanczos.patch}} is the patch discussed in the the {{dev}} mailing-list:
{quote}
As I initially feared, what was proposed in the JIRA ticket leads to high 
floating point errors. I adapted a method proposed in 
[BOOST|http://www.boost.org/doc/libs/1_35_0/libs/math/doc/sf_and_dist/html/math_toolkit/special/sf_gamma/igamma.html]
 (formula (15))
with acceptable errors. Meanwhile, I've also managed to improve the accuracy of 
the computation of the density for the range of parameters where the previous 
implementation was already working: in this range, the accuracy _was_ about 300 
ulps, and is now 1-2 ulps! {color:red}Note: I might have been too optimistic, 
here. There is a significant improvement, though{color}. I think this 
improvement is worth implementing.

The downside is that I need to expose the Lanczos implementation internally 
used by {{o.a.c.m3.special.Gamma}}. This approximation is so standard that I 
don't see it as a problem. I don't think that it reveals too much of the Gamma 
internals, since the javadoc of {{Gamma.logGamma}} states that it uses this 
approximation. So what I
propose is the addition of two methods in {{Gamma}}:
* {{double getLanczosG()}}: returns the {{g}} constant
* {{double lanczos(double)}}: returns the value of the Lanczos sum.
{quote}

 Better implementation for the gamma distribution density function
 -

 Key: MATH-753
 URL: https://issues.apache.org/jira/browse/MATH-753
 Project: Commons Math
  Issue Type: Improvement
Affects Versions: 2.2, 3.0, 3.1
Reporter: Francesco Strino
Assignee: Sébastien Brisard
Priority: Minor
  Labels: improvement, stability
 Fix For: 3.1

 Attachments: lanczos.patch


 The way the density of the gamma distribution function is estimated can be 
 improved.
 It's much more stable to calculate first the log of the density and then 
 exponentiate, otherwise the function returns NaN for high values of the 
 parameters alpha and beta. 
 It would be sufficient to change the public double density(double x) function 
 at line 204 in the file 
 org.apache.commons.math.distribution.GammaDistributionImpl as follows:
 return Math.exp(Math.log( x )*(alpha-1) - Math.log(beta)*alpha - x/beta - 
 Gamma.logGamma(alpha)); 
 In order to improve performance, log(beta) and Gamma.logGamma(alpha) could 
 also be precomputed and stored during initialization.

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