[jira] [Commented] (CODEC-158) Add Codec, StringCodec, and BinaryCodec interfaces that extend both encoder and decoder

2012-10-26 Thread Mirko Raner (JIRA)

[ 
https://issues.apache.org/jira/browse/CODEC-158?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484759#comment-13484759
 ] 

Mirko Raner commented on CODEC-158:
---

Hi Sebb,

I haven't seen any activity on this issue in a while.
Are there further improvements or changes you would like me to make, or is the 
patch ready to be committed?

Thanks,

Mirko


 Add Codec, StringCodec, and BinaryCodec interfaces that extend both encoder 
 and decoder
 ---

 Key: CODEC-158
 URL: https://issues.apache.org/jira/browse/CODEC-158
 Project: Commons Codec
  Issue Type: Improvement
Affects Versions: 1.7
Reporter: Mirko Raner
Priority: Minor
 Attachments: CODEC-158.patch, CODEC-158.patch

   Original Estimate: 1h
  Remaining Estimate: 1h

 Currently, there are no common interfaces that extend both the encoder and 
 the decoder interfaces. This makes it hard to deal with a codec as a single 
 entity and requires separate treatment of encoder and decoder parts.
 For example, let's say you want to develop a storage abstraction that uses an 
 encoding. Right now, you would need to write
 class Storage
 {
 @Inject Encoder encoder;
 @Inject Decoder decoder;
 //...
 }
 In practice, encoder and decoder need to match, and most likely both encoder 
 and decoder would be bound to the same implementation, like Base64 or 
 URLCodec. Because of the lack of a common superinterface they need to be 
 specified separately. There are some classes like BaseNCodec that can be used 
 to unify some of the encoders and decoders, but they are too specific and 
 restrictive.
 Ideally, I would like to write:
 class Storage
 {
 @Inject Codec codec;
 //...
 }
 Assuming that combined encoder/decoder classes like Base64 would implement 
 that Codec interface, this could be directly bound to a combined 
 encoder/decoder implementation.
 It would be nice if these interfaces were added and the existing codec 
 classes (BaseNCodec, Hex, QCodec, QuotedPrintableCodec, URLCodec) could be 
 modified to implement these new interfaces.
 I'm happy to contribute a patch if there is interest in this feature.

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[jira] [Updated] (LANG-836) StrSubstitutor does not support StringBuilder or CharSequence

2012-10-26 Thread Arnaud Brunet (JIRA)

 [ 
https://issues.apache.org/jira/browse/LANG-836?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Arnaud Brunet updated LANG-836:
---

Attachment: mylyn-context.zip

 StrSubstitutor does not support StringBuilder or CharSequence
 -

 Key: LANG-836
 URL: https://issues.apache.org/jira/browse/LANG-836
 Project: Commons Lang
  Issue Type: Bug
Reporter: Sebb
 Attachments: LANG-836.patch, LANG-836-v2.patch, mylyn-context.zip




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[jira] [Commented] (LANG-836) StrSubstitutor does not support StringBuilder or CharSequence

2012-10-26 Thread Arnaud Brunet (JIRA)

[ 
https://issues.apache.org/jira/browse/LANG-836?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484815#comment-13484815
 ] 

Arnaud Brunet commented on LANG-836:


Attached a new patch that doesn't break binary comptability (i hope).

 StrSubstitutor does not support StringBuilder or CharSequence
 -

 Key: LANG-836
 URL: https://issues.apache.org/jira/browse/LANG-836
 Project: Commons Lang
  Issue Type: Bug
Reporter: Sebb
 Attachments: LANG-836.patch, LANG-836-v2.patch, mylyn-context.zip




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[jira] [Updated] (LANG-836) StrSubstitutor does not support StringBuilder or CharSequence

2012-10-26 Thread Arnaud Brunet (JIRA)

 [ 
https://issues.apache.org/jira/browse/LANG-836?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Arnaud Brunet updated LANG-836:
---

Attachment: LANG-836-v2.patch

 StrSubstitutor does not support StringBuilder or CharSequence
 -

 Key: LANG-836
 URL: https://issues.apache.org/jira/browse/LANG-836
 Project: Commons Lang
  Issue Type: Bug
Reporter: Sebb
 Attachments: LANG-836.patch, LANG-836-v2.patch, mylyn-context.zip




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[jira] [Updated] (LANG-836) StrSubstitutor does not support StringBuilder or CharSequence

2012-10-26 Thread Arnaud Brunet (JIRA)

 [ 
https://issues.apache.org/jira/browse/LANG-836?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Arnaud Brunet updated LANG-836:
---

Attachment: (was: mylyn-context.zip)

 StrSubstitutor does not support StringBuilder or CharSequence
 -

 Key: LANG-836
 URL: https://issues.apache.org/jira/browse/LANG-836
 Project: Commons Lang
  Issue Type: Bug
Reporter: Sebb
 Attachments: LANG-836.patch, LANG-836-v2.patch




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[jira] [Updated] (CODEC-161) Add phonetic algorithm Match Rating Approach (MRA) to the commons codec

2012-10-26 Thread Colm Rice (JIRA)

 [ 
https://issues.apache.org/jira/browse/CODEC-161?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Colm Rice updated CODEC-161:


Attachment: CODEC-161-MatchRatingApproach.patch

MRA patch. My 1st contribution :-)

 Add phonetic algorithm Match Rating Approach (MRA) to the commons codec
 ---

 Key: CODEC-161
 URL: https://issues.apache.org/jira/browse/CODEC-161
 Project: Commons Codec
  Issue Type: New Feature
Affects Versions: 1.6
Reporter: Colm Rice
Priority: Minor
  Labels: newbie
 Attachments: CODEC-161-MatchRatingApproach.patch

   Original Estimate: 168h
  Remaining Estimate: 168h

 I want to add MatchRatingApproach algorithm to the Lucene project via commons 
 codec.
 What I have at the moment is a class called 
 org.apache.lucene.analysis.phoenetic.MatchRatingApproach implementing 
 StringEncoder
 I have a pretty comprehensive test file located at: 
 org.apache.lucene.analysis.phonetic.MatchRatingApproachTests
 It's not exactly existing pattern so I'm going to need a bit of advice here. 
 Thanks! Feel free to email.
 FYI: It my first contribution so be gentle :-)  C# is my native.
 I had incorrectly added this to Lucene solution as LUCENE-4494 but received 
 some good advice to move it to here. I'm doing that now.
 Reference: http://en.wikipedia.org/wiki/Match_rating_approach

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[jira] [Comment Edited] (CODEC-161) Add phonetic algorithm Match Rating Approach (MRA) to the commons codec

2012-10-26 Thread Colm Rice (JIRA)

[ 
https://issues.apache.org/jira/browse/CODEC-161?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484828#comment-13484828
 ] 

Colm Rice edited comment on CODEC-161 at 10/26/12 10:20 AM:


MRA phonetic codec patch. My 1st contribution :-)
Ack. Ryan McKinley cf. LUCENE-4494

  was (Author: crice):
MRA patch. My 1st contribution :-)
  
 Add phonetic algorithm Match Rating Approach (MRA) to the commons codec
 ---

 Key: CODEC-161
 URL: https://issues.apache.org/jira/browse/CODEC-161
 Project: Commons Codec
  Issue Type: New Feature
Affects Versions: 1.6
Reporter: Colm Rice
Priority: Minor
  Labels: newbie
 Attachments: CODEC-161-MatchRatingApproach.patch

   Original Estimate: 168h
  Remaining Estimate: 168h

 I want to add MatchRatingApproach algorithm to the Lucene project via commons 
 codec.
 What I have at the moment is a class called 
 org.apache.lucene.analysis.phoenetic.MatchRatingApproach implementing 
 StringEncoder
 I have a pretty comprehensive test file located at: 
 org.apache.lucene.analysis.phonetic.MatchRatingApproachTests
 It's not exactly existing pattern so I'm going to need a bit of advice here. 
 Thanks! Feel free to email.
 FYI: It my first contribution so be gentle :-)  C# is my native.
 I had incorrectly added this to Lucene solution as LUCENE-4494 but received 
 some good advice to move it to here. I'm doing that now.
 Reference: http://en.wikipedia.org/wiki/Match_rating_approach

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[jira] [Updated] (MATH-878) G-Test (Log-Likelihood ratio - LLR test) in math.stat.inference

2012-10-26 Thread Radoslav Tsvetkov (JIRA)

 [ 
https://issues.apache.org/jira/browse/MATH-878?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Radoslav Tsvetkov updated MATH-878:
---

Attachment: MATH-878_gTest_26102012.patch

I added most corrections.
* All corrections in the code part (no underscore in the names etc.)
* comments should look better now. The condensed form of the linked content is 
added in the comments. 

For sure there are some more issues left to beautify.



 G-Test (Log-Likelihood ratio - LLR test) in math.stat.inference
 ---

 Key: MATH-878
 URL: https://issues.apache.org/jira/browse/MATH-878
 Project: Commons Math
  Issue Type: New Feature
Affects Versions: 3.1, 3.2, 4.0
 Environment: Netbeans
Reporter: Radoslav Tsvetkov
  Labels: features, test
 Fix For: 3.1

 Attachments: MATH-878_gTest_12102012.patch, 
 MATH-878_gTest_15102012.patch, MATH-878_gTest_26102012.patch, 
 vcs-diff16294.patch

   Original Estimate: 24h
  Remaining Estimate: 24h

 1. Implementation of G-Test (Log-Likelihood ratio LLR test for independence 
 and goodnes-of-fit)
 2. Reference: http://en.wikipedia.org/wiki/G-test
 3. Reasons-Usefulness: G-tests are tests are increasingly being used in 
 situations where chi-squared tests were previously recommended. 
 The approximation to the theoretical chi-squared distribution for the G-test 
 is better than for the Pearson chi-squared tests. In cases where Observed 
 2*Expected for some cell case, the G-test is always better than the 
 chi-squared test.
 For testing goodness-of-fit the G-test is infinitely more efficient than the 
 chi squared test in the sense of Bahadur, but the two tests are equally 
 efficient in the sense of Pitman or in the sense of Hodge and Lehman. 

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[jira] [Comment Edited] (MATH-878) G-Test (Log-Likelihood ratio - LLR test) in math.stat.inference

2012-10-26 Thread Radoslav Tsvetkov (JIRA)

[ 
https://issues.apache.org/jira/browse/MATH-878?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484887#comment-13484887
 ] 

Radoslav Tsvetkov edited comment on MATH-878 at 10/26/12 12:54 PM:
---

I added most of the corrections.
* All corrections in the code part (no underscore in the names etc.)
* Comments should look better now. The condensed form of the linked content is 
added in the comments. (but the links are left)

For sure there are some more points left to beautify but with the time I guess 
they'll be perfected.



  was (Author: rtsvet):
I added most corrections.
* All corrections in the code part (no underscore in the names etc.)
* comments should look better now. The condensed form of the linked content is 
added in the comments. 

For sure there are some more issues left to beautify.


  
 G-Test (Log-Likelihood ratio - LLR test) in math.stat.inference
 ---

 Key: MATH-878
 URL: https://issues.apache.org/jira/browse/MATH-878
 Project: Commons Math
  Issue Type: New Feature
Affects Versions: 3.1, 3.2, 4.0
 Environment: Netbeans
Reporter: Radoslav Tsvetkov
  Labels: features, test
 Fix For: 3.1

 Attachments: MATH-878_gTest_12102012.patch, 
 MATH-878_gTest_15102012.patch, MATH-878_gTest_26102012.patch, 
 vcs-diff16294.patch

   Original Estimate: 24h
  Remaining Estimate: 24h

 1. Implementation of G-Test (Log-Likelihood ratio LLR test for independence 
 and goodnes-of-fit)
 2. Reference: http://en.wikipedia.org/wiki/G-test
 3. Reasons-Usefulness: G-tests are tests are increasingly being used in 
 situations where chi-squared tests were previously recommended. 
 The approximation to the theoretical chi-squared distribution for the G-test 
 is better than for the Pearson chi-squared tests. In cases where Observed 
 2*Expected for some cell case, the G-test is always better than the 
 chi-squared test.
 For testing goodness-of-fit the G-test is infinitely more efficient than the 
 chi squared test in the sense of Bahadur, but the two tests are equally 
 efficient in the sense of Pitman or in the sense of Hodge and Lehman. 

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[jira] [Updated] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Gary Gregory (JIRA)

 [ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Gary Gregory updated VFS-440:
-

Attachment: sftp-stream-proxy-v4.diff

Benjamin,

I've started a code review and made a couple of changes. See 
sftp-stream-proxy-v4.diff. But I got stuck on the questions below.

Questions:

1. SftpStreamProxy keeps a session that is never initialized but is used in 
close(), which looks like it will cause an NPE. Am I missing something?

2. SftpStreamProxy used to keep a JSch but did not use it, so I removed it. Did 
you intend to use it?

Gary


 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Comment Edited] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Gary Gregory (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484930#comment-13484930
 ] 

Gary Gregory edited comment on VFS-440 at 10/26/12 2:00 PM:


Benjamin,

I've started a code review and made a couple of changes. See 
sftp-stream-proxy-v4.diff. But I got stuck on the questions below.

Questions:

1. SftpStreamProxy keeps a session that is never initialized but is used in 
close(), which looks like it will cause an NPE. Am I missing something?

2. SftpStreamProxy used to keep a JSch but did not use it, so I removed it. Did 
you intend to use it?

3. SftpStreamProxy getSocket() returns null, I think this warrants a comment.

Gary


  was (Author: garydgregory):
Benjamin,

I've started a code review and made a couple of changes. See 
sftp-stream-proxy-v4.diff. But I got stuck on the questions below.

Questions:

1. SftpStreamProxy keeps a session that is never initialized but is used in 
close(), which looks like it will cause an NPE. Am I missing something?

2. SftpStreamProxy used to keep a JSch but did not use it, so I removed it. Did 
you intend to use it?

Gary

  
 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Commented] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Benjamin Piwowarski (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484941#comment-13484941
 ] 

Benjamin Piwowarski commented on VFS-440:
-

Gary, here are the answers to your questions:

1. The session should be from the connect - this is why it is not implemented. 
Strange that I never saw an error message coming from there. 

2. No, the JSch instance was a left over from early implementation - we now 
rely on Sftp connection mechanism to avoid having two different systems to 
configure SSH connections;

3. SftpStreamProxy does not rely on sockets - hence it does not have one.

Benjamin

 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Comment Edited] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Benjamin Piwowarski (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484941#comment-13484941
 ] 

Benjamin Piwowarski edited comment on VFS-440 at 10/26/12 2:15 PM:
---

Gary, here are the answers to your questions:

1. The session should be from the connect - this is why it is not implemented. 
Strange that I never saw an error message coming from there. 

2. No, the JSch instance was a left over from early implementation - we now 
rely on Sftp connection mechanism to avoid having two different systems to 
configure SSH connections;

3. SftpStreamProxy does not rely on sockets - hence it does not have one.

I reviewed the changes in patch v4 and I have no special comments.

Benjamin

  was (Author: bpiwowar):
Gary, here are the answers to your questions:

1. The session should be from the connect - this is why it is not implemented. 
Strange that I never saw an error message coming from there. 

2. No, the JSch instance was a left over from early implementation - we now 
rely on Sftp connection mechanism to avoid having two different systems to 
configure SSH connections;

3. SftpStreamProxy does not rely on sockets - hence it does not have one.

Benjamin
  
 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Commented] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Gary Gregory (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484958#comment-13484958
 ] 

Gary Gregory commented on VFS-440:
--

So the session ivar be removed, check?

 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Commented] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Benjamin Piwowarski (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13484962#comment-13484962
 ] 

Benjamin Piwowarski commented on VFS-440:
-

Just to be sure:

- JSch jsch should be removed
- in connect, the final Session should be removed so that we use the member 
variable session and not a local one (and that the session can be properly 
closed)

 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Commented] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Gary Gregory (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485027#comment-13485027
 ] 

Gary Gregory commented on VFS-440:
--

Ok, It's clear now. Thanks. 

 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Created] (LANG-847) Add an isTrue and isFalse method to StringUtils

2012-10-26 Thread Dexter Fryar (JIRA)
Dexter Fryar created LANG-847:
-

 Summary: Add an isTrue and isFalse method to StringUtils
 Key: LANG-847
 URL: https://issues.apache.org/jira/browse/LANG-847
 Project: Commons Lang
  Issue Type: Improvement
Affects Versions: 3.x
Reporter: Dexter Fryar
Priority: Trivial
 Attachments: StringUtils.java.patchfile, StringUtilsTest.java.patchfile

Implement a common list of true / false statements with a helper method which 
cleans and validates an input string.

StringUtils.isFalse(OFF)
StringUtils.isFalse(false)
StringUtils.isFalse(   false)
StringUtils.isFalse(false\n)
StringUtils.isFalse(  false\r\n  )
StringUtils.isFalse(  0\r\n  )
StringUtils.isFalse(disable)
StringUtils.isFalse(  disable\r\n  )
StringUtils.isFalse(disabled)
StringUtils.isFalse(  disabled\r\n  )
StringUtils.isFalse(N)
StringUtils.isFalse( N\n  )
StringUtils.isFalse(NO)
StringUtils.isFalse(NO\r\n  )

StringUtils.isTrue(ON)
StringUtils.isTrue(true)
StringUtils.isTrue(   true)
StringUtils.isTrue(true\n)
StringUtils.isTrue(  true\r\n  )
StringUtils.isTrue(  1\r\n  )
StringUtils.isTrue(enable)
StringUtils.isTrue(  enable\r\n  )
StringUtils.isTrue(enabled)
StringUtils.isTrue(  enabled\r\n  )
StringUtils.isTrue(Y)
StringUtils.isTrue( Y\n  )
StringUtils.isTrue(YES)
StringUtils.isTrue(YES\r\n  )

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[jira] [Updated] (LANG-847) Add an isTrue and isFalse method to StringUtils

2012-10-26 Thread Dexter Fryar (JIRA)

 [ 
https://issues.apache.org/jira/browse/LANG-847?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Dexter Fryar updated LANG-847:
--

Attachment: StringUtilsTest.java.patchfile
StringUtils.java.patchfile

Added two patch files that contain junit and source.

 Add an isTrue and isFalse method to StringUtils
 ---

 Key: LANG-847
 URL: https://issues.apache.org/jira/browse/LANG-847
 Project: Commons Lang
  Issue Type: Improvement
Affects Versions: 3.x
Reporter: Dexter Fryar
Priority: Trivial
 Attachments: StringUtils.java.patchfile, 
 StringUtilsTest.java.patchfile

   Original Estimate: 2h
  Remaining Estimate: 2h

 Implement a common list of true / false statements with a helper method which 
 cleans and validates an input string.
 StringUtils.isFalse(OFF)
 StringUtils.isFalse(false)
 StringUtils.isFalse(   false)
 StringUtils.isFalse(false\n)
 StringUtils.isFalse(  false\r\n  )
 StringUtils.isFalse(  0\r\n  )
 StringUtils.isFalse(disable)
 StringUtils.isFalse(  disable\r\n  )
 StringUtils.isFalse(disabled)
 StringUtils.isFalse(  disabled\r\n  )
 StringUtils.isFalse(N)
 StringUtils.isFalse( N\n  )
 StringUtils.isFalse(NO)
 StringUtils.isFalse(NO\r\n  )
 StringUtils.isTrue(ON)
 StringUtils.isTrue(true)
 StringUtils.isTrue(   true)
 StringUtils.isTrue(true\n)
 StringUtils.isTrue(  true\r\n  )
 StringUtils.isTrue(  1\r\n  )
 StringUtils.isTrue(enable)
 StringUtils.isTrue(  enable\r\n  )
 StringUtils.isTrue(enabled)
 StringUtils.isTrue(  enabled\r\n  )
 StringUtils.isTrue(Y)
 StringUtils.isTrue( Y\n  )
 StringUtils.isTrue(YES)
 StringUtils.isTrue(YES\r\n  )

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[jira] [Updated] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Gary Gregory (JIRA)

 [ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Gary Gregory updated VFS-440:
-

Attachment: sftp-stream-proxy-v5.diff

We are getting close! The remaining issue is the test is not cleaning up after 
itself. This affects all the patches I tested: v3, v4 and v5:

{noformat}
---
With V3 patch:

---
 T E S T S
---
Running org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase
Sftp server started on port 64349
true
created threads still running:
#1: mainNioProcessor-2  not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#2: mainpool-1-thread-1 not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#3: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session
#4: mainThread-2not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#5: mainNioProcessor-3  not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#6: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session
#7: mainThread-4not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#8: mainNioProcessor-4  not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#9: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session
#10: main   Thread-6not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#11: main   pool-2-thread-4 not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#12: main   Thread-11   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#13: main   Thread-27   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#14: main   Thread-28   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#15: main   Thread-29   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem

created threads still running:
#1: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session

Tests run: 87, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.693 sec

---
With V4 patch:

---
 T E S T S
---
Running org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase
Sftp server started on port 64466
true
created threads still running:
#1: mainNioProcessor-2  not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#2: mainpool-1-thread-1 not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#3: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session
#4: mainThread-2not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#5: mainNioProcessor-3  not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#6: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session
#7: mainThread-4not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#8: mainNioProcessor-4  not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#9: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session
#10: main   Thread-6not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#11: main   pool-2-thread-4 not_a_daemonclass 
java.util.concurrent.ThreadPoolExecutor$Worker
#12: main   Thread-11   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#13: main   Thread-27   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#14: main   Thread-28   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem
#15: main   Thread-29   not_a_daemonclass 
org.apache.commons.vfs2.provider.sftp.test.SftpProviderTestCase$MySftpSubsystem

created threads still running:
#1: mainConnect thread localhost sessiondaemon  class 
com.jcraft.jsch.Session

Tests run: 87, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 13.981 sec


[jira] [Commented] (VFS-440) [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)

2012-10-26 Thread Gary Gregory (JIRA)

[ 
https://issues.apache.org/jira/browse/VFS-440?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485118#comment-13485118
 ] 

Gary Gregory commented on VFS-440:
--

I attached v5 of the patch.

 [SFTP] Stream (e.g. netcat) proxy for Sftp file system (aka ProxyCommand)
 -

 Key: VFS-440
 URL: https://issues.apache.org/jira/browse/VFS-440
 Project: Commons VFS
  Issue Type: Improvement
Reporter: Benjamin Piwowarski
Priority: Minor
  Labels: proxy, sftp
 Attachments: sftp-stream-proxy.diff, sftp-stream-proxy-v2.diff, 
 sftp-stream-proxy-v3.diff, sftp-stream-proxy-v4.diff, 
 sftp-stream-proxy-v5.diff


 What I propose is to add the possibility to connect to a remote SSH server 
 through an SSH connection stream (instead of an HTTP or SOCKS proxy). See for 
 instance
 http://backdrift.org/transparent-proxy-with-ssh
 for a use case.
 This simulates a ProxyCommand where the command is run on a SSH host.
 The patch also contains a test for the new functionality. 
 Example of use (with the netcat command nc -q 0 HOSTNAME PORT)
 {code:java}
 builder.setProxyType(opts, SftpFileSystemConfigBuilder.PROXY_STREAM);
 builder.setProxyCommand(opts, SftpStreamProxy.NETCAT_COMMAND);
 builder.setProxyHost(opts, gate.way.host);
 builder.setProxyPort(opts, 22);
 builder.setProxyOptions(opts, proxyOptions);
 {code}

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[jira] [Commented] (CODEC-161) Add phonetic algorithm Match Rating Approach (MRA) to the commons codec

2012-10-26 Thread Thomas Neidhart (JIRA)

[ 
https://issues.apache.org/jira/browse/CODEC-161?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485138#comment-13485138
 ] 

Thomas Neidhart commented on CODEC-161:
---

Hi Colm,

thanks for your contribution, I looked at the patch and it's not so bad, though 
it will require some adaptations before it can be accepted:

 * indentation is normally 4 chars, only spaces
 * author name is usually omitted in the source files, but added to the pom.xml
 * try to avoid trailing spaces in a line
 * naming convention for methods: camel case, e.g. removeVowels, instead of 
RemoveVowels
 * try to use parenthesis also for single line if clauses
 * documentation for private methods should be using javadoc style or omitted
 * the removeAccents method uses indexOf in a string to remove accents, but 
this can be rather slow for large strings
   better use a set of all accent chars

btw. there is a checkstyle configuration in the trunk, which you can use to 
check your contribution (e.g. with the eclipse plugin or on the command line 
with maven: mvn checkstyle:checkstyle). The less warnings remain the more 
likely it is that a patch will be committed ;-).

Thomas

 Add phonetic algorithm Match Rating Approach (MRA) to the commons codec
 ---

 Key: CODEC-161
 URL: https://issues.apache.org/jira/browse/CODEC-161
 Project: Commons Codec
  Issue Type: New Feature
Affects Versions: 1.6
Reporter: Colm Rice
Priority: Minor
  Labels: newbie
 Attachments: CODEC-161-MatchRatingApproach.patch

   Original Estimate: 168h
  Remaining Estimate: 168h

 I want to add MatchRatingApproach algorithm to the Lucene project via commons 
 codec.
 What I have at the moment is a class called 
 org.apache.lucene.analysis.phoenetic.MatchRatingApproach implementing 
 StringEncoder
 I have a pretty comprehensive test file located at: 
 org.apache.lucene.analysis.phonetic.MatchRatingApproachTests
 It's not exactly existing pattern so I'm going to need a bit of advice here. 
 Thanks! Feel free to email.
 FYI: It my first contribution so be gentle :-)  C# is my native.
 I had incorrectly added this to Lucene solution as LUCENE-4494 but received 
 some good advice to move it to here. I'm doing that now.
 Reference: http://en.wikipedia.org/wiki/Match_rating_approach

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[jira] [Commented] (CODEC-161) Add phonetic algorithm Match Rating Approach (MRA) to the commons codec

2012-10-26 Thread Gary Gregory (JIRA)

[ 
https://issues.apache.org/jira/browse/CODEC-161?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485148#comment-13485148
 ] 

Gary Gregory commented on CODEC-161:


Hello Colm,

Thank you for the patch. Welcome to our little [codec] world!

Please find my code review below.

# General note: Look at the code around you in [codec] and follow the 
conventions you see.
# Rename the main class from {{MatchRatingApproach}} to 
{{MatchRatingApproachEncoder}}
# All methods start with a lower case, so rename {{public static String 
GetMRA(String name)}} to {{GetMRA}}, and so on.
# About @see hyperlink(s) in the Javadoc for {{MatchRatingApproachEncoder}}. If 
Wikipedia is all there is, then so be it, but any other documentation would be 
helpful.
# You can add yourself as a contributor in the pom.xml but I'd rather leave 
names, emails (and egos) out of .java files.
# In the Javadocs, soundex should be Soundex.
# Always use blocks. IOW: if (expr){\n stmt;\n}
# Rename all unit test methods to be prefixed with {{test}} instead of {{MRA_}}.
# The method {{RemoveDoubleConsonants}} (sic) looks like it could be 
implemented in one loop. I'd worry about this one last.
# {{PLAIN_ASCII}} and {{UNICODE}} need Javadoc to explain how they are used.
# Rename {{MatchRatingApproachTests}} to {{MatchRatingApproachTest}} (singular) 
or Maven will not pick it up in the test suite.
# Improve code coverage from 84% to... can you get it to 100%?
# In-line your test methods from:

{code:java}
@Test
public void MRA_Compare_ZACH_ZAKARIA_SuccessfullyMatched()
{
//Arrange
String testInput2 = Zach;
String testInput1 = Zakaria;

//Assert
boolean actualRes = MatchRatingApproach.CompareMRA(testInput1, 
testInput2);

//Act
assertTrue(actualRes);

}
{code}

to:

{code:java}
@Test
public void MRA_Compare_ZACH_ZAKARIA_SuccessfullyMatched() {
assertTrue(MatchRatingApproach.CompareMRA(Zakaria, Zach));
}
{code}

 Add phonetic algorithm Match Rating Approach (MRA) to the commons codec
 ---

 Key: CODEC-161
 URL: https://issues.apache.org/jira/browse/CODEC-161
 Project: Commons Codec
  Issue Type: New Feature
Affects Versions: 1.6
Reporter: Colm Rice
Priority: Minor
  Labels: newbie
 Attachments: CODEC-161-MatchRatingApproach.patch

   Original Estimate: 168h
  Remaining Estimate: 168h

 I want to add MatchRatingApproach algorithm to the Lucene project via commons 
 codec.
 What I have at the moment is a class called 
 org.apache.lucene.analysis.phoenetic.MatchRatingApproach implementing 
 StringEncoder
 I have a pretty comprehensive test file located at: 
 org.apache.lucene.analysis.phonetic.MatchRatingApproachTests
 It's not exactly existing pattern so I'm going to need a bit of advice here. 
 Thanks! Feel free to email.
 FYI: It my first contribution so be gentle :-)  C# is my native.
 I had incorrectly added this to Lucene solution as LUCENE-4494 but received 
 some good advice to move it to here. I'm doing that now.
 Reference: http://en.wikipedia.org/wiki/Match_rating_approach

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[jira] [Created] (SANDBOX-436) [BeanUtils2] Implement BeanAccessor.getMapped

2012-10-26 Thread Benedikt Ritter (JIRA)
Benedikt Ritter created SANDBOX-436:
---

 Summary: [BeanUtils2] Implement BeanAccessor.getMapped
 Key: SANDBOX-436
 URL: https://issues.apache.org/jira/browse/SANDBOX-436
 Project: Commons Sandbox
  Issue Type: Improvement
  Components: BeanUtils2
Affects Versions: Nightly Builds
Reporter: Benedikt Ritter


The method getMapped() has to be implemented on DefaultBeanAccessor.

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[jira] [Updated] (SANDBOX-436) [BeanUtils2] Implement BeanAccessor.getMapped

2012-10-26 Thread Benedikt Ritter (JIRA)

 [ 
https://issues.apache.org/jira/browse/SANDBOX-436?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Benedikt Ritter updated SANDBOX-436:


Attachment: SANDBOX-436.patch

I've created a patch for this issue. It also contains the changes from my patch 
for SANDBOX-433 because the tests are failing on my machine without those 
changes.
To resolve this issue, I have reused the MappedPropertyDescriptor from 
BeanUtils1.

TIA for review.

 [BeanUtils2] Implement BeanAccessor.getMapped
 -

 Key: SANDBOX-436
 URL: https://issues.apache.org/jira/browse/SANDBOX-436
 Project: Commons Sandbox
  Issue Type: Improvement
  Components: BeanUtils2
Affects Versions: Nightly Builds
Reporter: Benedikt Ritter
 Attachments: SANDBOX-436.patch


 The method getMapped() has to be implemented on DefaultBeanAccessor.

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[jira] [Updated] (LANG-847) Add an isTrue and isFalse method to StringUtils

2012-10-26 Thread Dexter Fryar (JIRA)

 [ 
https://issues.apache.org/jira/browse/LANG-847?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Dexter Fryar updated LANG-847:
--

Component/s: lang.*

 Add an isTrue and isFalse method to StringUtils
 ---

 Key: LANG-847
 URL: https://issues.apache.org/jira/browse/LANG-847
 Project: Commons Lang
  Issue Type: Improvement
  Components: lang.*
Affects Versions: 3.x
Reporter: Dexter Fryar
Priority: Trivial
 Attachments: StringUtils.java.patchfile, 
 StringUtilsTest.java.patchfile

   Original Estimate: 2h
  Remaining Estimate: 2h

 Implement a common list of true / false statements with a helper method which 
 cleans and validates an input string.
 StringUtils.isFalse(OFF)
 StringUtils.isFalse(false)
 StringUtils.isFalse(   false)
 StringUtils.isFalse(false\n)
 StringUtils.isFalse(  false\r\n  )
 StringUtils.isFalse(  0\r\n  )
 StringUtils.isFalse(disable)
 StringUtils.isFalse(  disable\r\n  )
 StringUtils.isFalse(disabled)
 StringUtils.isFalse(  disabled\r\n  )
 StringUtils.isFalse(N)
 StringUtils.isFalse( N\n  )
 StringUtils.isFalse(NO)
 StringUtils.isFalse(NO\r\n  )
 StringUtils.isTrue(ON)
 StringUtils.isTrue(true)
 StringUtils.isTrue(   true)
 StringUtils.isTrue(true\n)
 StringUtils.isTrue(  true\r\n  )
 StringUtils.isTrue(  1\r\n  )
 StringUtils.isTrue(enable)
 StringUtils.isTrue(  enable\r\n  )
 StringUtils.isTrue(enabled)
 StringUtils.isTrue(  enabled\r\n  )
 StringUtils.isTrue(Y)
 StringUtils.isTrue( Y\n  )
 StringUtils.isTrue(YES)
 StringUtils.isTrue(YES\r\n  )

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[jira] [Commented] (LANG-847) Add an isTrue and isFalse method to StringUtils

2012-10-26 Thread James Ring (JIRA)

[ 
https://issues.apache.org/jira/browse/LANG-847?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485232#comment-13485232
 ] 

James Ring commented on LANG-847:
-

I don't think this is appropriate for a general-purpose lib like Commons Lang. 
It's hard to see a burning need for something like this.

 Add an isTrue and isFalse method to StringUtils
 ---

 Key: LANG-847
 URL: https://issues.apache.org/jira/browse/LANG-847
 Project: Commons Lang
  Issue Type: Improvement
  Components: lang.*
Affects Versions: 3.x
Reporter: Dexter Fryar
Priority: Trivial
 Attachments: StringUtils.java.patchfile, 
 StringUtilsTest.java.patchfile

   Original Estimate: 2h
  Remaining Estimate: 2h

 Implement a common list of true / false statements with a helper method which 
 cleans and validates an input string.
 StringUtils.isFalse(OFF)
 StringUtils.isFalse(false)
 StringUtils.isFalse(   false)
 StringUtils.isFalse(false\n)
 StringUtils.isFalse(  false\r\n  )
 StringUtils.isFalse(  0\r\n  )
 StringUtils.isFalse(disable)
 StringUtils.isFalse(  disable\r\n  )
 StringUtils.isFalse(disabled)
 StringUtils.isFalse(  disabled\r\n  )
 StringUtils.isFalse(N)
 StringUtils.isFalse( N\n  )
 StringUtils.isFalse(NO)
 StringUtils.isFalse(NO\r\n  )
 StringUtils.isTrue(ON)
 StringUtils.isTrue(true)
 StringUtils.isTrue(   true)
 StringUtils.isTrue(true\n)
 StringUtils.isTrue(  true\r\n  )
 StringUtils.isTrue(  1\r\n  )
 StringUtils.isTrue(enable)
 StringUtils.isTrue(  enable\r\n  )
 StringUtils.isTrue(enabled)
 StringUtils.isTrue(  enabled\r\n  )
 StringUtils.isTrue(Y)
 StringUtils.isTrue( Y\n  )
 StringUtils.isTrue(YES)
 StringUtils.isTrue(YES\r\n  )

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[jira] [Created] (IO-354) Commons IO Tailer does not respect UTF-8 Charset

2012-10-26 Thread Liyu Yi (JIRA)
Liyu Yi created IO-354:
--

 Summary: Commons IO Tailer does not respect UTF-8 Charset
 Key: IO-354
 URL: https://issues.apache.org/jira/browse/IO-354
 Project: Commons IO
  Issue Type: Bug
  Components: Utilities
Affects Versions: 2.3
 Environment: JDK 7 
RHEL Linux
Apache Commons IO version 2.4
Reporter: Liyu Yi


I just realized there is a defect in the source code of 
org.apache.commons.io.input.Tailer.java. Basically, the current 
implementation does not work for multi-byte encoded files. See the following 
snippet,

448private long readLines(RandomAccessFile reader) throws IOException {
449StringBuilder sb = new StringBuilder();
450
451long pos = reader.getFilePointer();
452long rePos = pos; // position to re-read
453
454int num;
455boolean seenCR = false;
456while (run  ((num = reader.read(inbuf)) != -1)) {
457for (int i = 0; i  num; i++) {
458byte ch = inbuf[i];
459switch (ch) {
460case '\n':
461seenCR = false; // swallow CR before LF
462listener.handle(sb.toString());
463sb.setLength(0);
464rePos = pos + i + 1;
465break;
466case '\r':
467if (seenCR) {
468sb.append('\r');
469}
470seenCR = true;
471break;
472default:
473if (seenCR) {
474seenCR = false; // swallow final CR
475listener.handle(sb.toString());
476sb.setLength(0);
477rePos = pos + i + 1;
478}
479sb.append((char) ch); // add character, not its ascii 
value
480}
481}
482
483pos = reader.getFilePointer();
484}
485
486reader.seek(rePos); // Ensure we can re-read if necessary
487return rePos;
488}

At line 479, the conversion of byte to char types breaks the encoding.

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[jira] [Commented] (IO-354) Commons IO Tailer does not respect UTF-8 Charset

2012-10-26 Thread Liyu Yi (JIRA)

[ 
https://issues.apache.org/jira/browse/IO-354?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485300#comment-13485300
 ] 

Liyu Yi commented on IO-354:


I used a hacky fix to reconstruct the String with right encoding in the 
handler class. 

private String rebuildUTF8String(String line) {
int len = line.length();
byte[] bytes = new byte[len];
for (int i=0; ilen; i++) {
bytes[i] = (byte)line.charAt(i);
}
return new String(bytes, UTF8);
}

However, the right approach is to pass in the encoding in the create method 
and handling it in the Tailer.

 Commons IO Tailer does not respect UTF-8 Charset
 

 Key: IO-354
 URL: https://issues.apache.org/jira/browse/IO-354
 Project: Commons IO
  Issue Type: Bug
  Components: Utilities
Affects Versions: 2.3
 Environment: JDK 7 
 RHEL Linux
 Apache Commons IO version 2.4
Reporter: Liyu Yi
  Labels: Charset, Encoding, Tailer

 I just realized there is a defect in the source code of 
 org.apache.commons.io.input.Tailer.java. Basically, the current 
 implementation does not work for multi-byte encoded files. See the following 
 snippet,
 448private long readLines(RandomAccessFile reader) throws IOException {
 449StringBuilder sb = new StringBuilder();
 450
 451long pos = reader.getFilePointer();
 452long rePos = pos; // position to re-read
 453
 454int num;
 455boolean seenCR = false;
 456while (run  ((num = reader.read(inbuf)) != -1)) {
 457for (int i = 0; i  num; i++) {
 458byte ch = inbuf[i];
 459switch (ch) {
 460case '\n':
 461seenCR = false; // swallow CR before LF
 462listener.handle(sb.toString());
 463sb.setLength(0);
 464rePos = pos + i + 1;
 465break;
 466case '\r':
 467if (seenCR) {
 468sb.append('\r');
 469}
 470seenCR = true;
 471break;
 472default:
 473if (seenCR) {
 474seenCR = false; // swallow final CR
 475listener.handle(sb.toString());
 476sb.setLength(0);
 477rePos = pos + i + 1;
 478}
 479sb.append((char) ch); // add character, not its ascii 
 value
 480}
 481}
 482
 483pos = reader.getFilePointer();
 484}
 485
 486reader.seek(rePos); // Ensure we can re-read if necessary
 487return rePos;
 488}
 At line 479, the conversion of byte to char types breaks the encoding.

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[jira] [Comment Edited] (IO-354) Commons IO Tailer does not respect UTF-8 Charset

2012-10-26 Thread Liyu Yi (JIRA)

[ 
https://issues.apache.org/jira/browse/IO-354?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485300#comment-13485300
 ] 

Liyu Yi edited comment on IO-354 at 10/27/12 12:10 AM:
---

I used a hacky fix to reconstruct the String with right encoding in the 
handler class. 

private String rebuildUTF8String(String line) {
int len = line.length();
byte[] bytes = new byte[len];
for (int i=0; ilen; i++) {
bytes[i] = (byte)line.charAt(i);
}
return new String(bytes, UTF8);
}

However, the right approach is to pass in the encoding in the create method 
and handle it in the Tailer.

  was (Author: liyuyi):
I used a hacky fix to reconstruct the String with right encoding in the 
handler class. 

private String rebuildUTF8String(String line) {
int len = line.length();
byte[] bytes = new byte[len];
for (int i=0; ilen; i++) {
bytes[i] = (byte)line.charAt(i);
}
return new String(bytes, UTF8);
}

However, the right approach is to pass in the encoding in the create method 
and handling it in the Tailer.
  
 Commons IO Tailer does not respect UTF-8 Charset
 

 Key: IO-354
 URL: https://issues.apache.org/jira/browse/IO-354
 Project: Commons IO
  Issue Type: Bug
  Components: Utilities
Affects Versions: 2.3
 Environment: JDK 7 
 RHEL Linux
 Apache Commons IO version 2.4
Reporter: Liyu Yi
  Labels: Charset, Encoding, Tailer

 I just realized there is a defect in the source code of 
 org.apache.commons.io.input.Tailer.java. Basically, the current 
 implementation does not work for multi-byte encoded files. See the following 
 snippet,
 448private long readLines(RandomAccessFile reader) throws IOException {
 449StringBuilder sb = new StringBuilder();
 450
 451long pos = reader.getFilePointer();
 452long rePos = pos; // position to re-read
 453
 454int num;
 455boolean seenCR = false;
 456while (run  ((num = reader.read(inbuf)) != -1)) {
 457for (int i = 0; i  num; i++) {
 458byte ch = inbuf[i];
 459switch (ch) {
 460case '\n':
 461seenCR = false; // swallow CR before LF
 462listener.handle(sb.toString());
 463sb.setLength(0);
 464rePos = pos + i + 1;
 465break;
 466case '\r':
 467if (seenCR) {
 468sb.append('\r');
 469}
 470seenCR = true;
 471break;
 472default:
 473if (seenCR) {
 474seenCR = false; // swallow final CR
 475listener.handle(sb.toString());
 476sb.setLength(0);
 477rePos = pos + i + 1;
 478}
 479sb.append((char) ch); // add character, not its ascii 
 value
 480}
 481}
 482
 483pos = reader.getFilePointer();
 484}
 485
 486reader.seek(rePos); // Ensure we can re-read if necessary
 487return rePos;
 488}
 At line 479, the conversion of byte to char types breaks the encoding.

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[jira] [Updated] (IO-354) Commons IO Tailer does not respect UTF-8 Charset

2012-10-26 Thread Liyu Yi (JIRA)

 [ 
https://issues.apache.org/jira/browse/IO-354?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Liyu Yi updated IO-354:
---

Description: 
I just realized there is a defect in the source code of 
org.apache.commons.io.input.Tailer.java. Basically, the current 
implementation does not work for multi-byte encoded files. See the following 
snippet,

448private long readLines(RandomAccessFile reader) throws IOException {
449StringBuilder sb = new StringBuilder();
450
451long pos = reader.getFilePointer();
452long rePos = pos; // position to re-read
453
454int num;
455boolean seenCR = false;
456while (run  ((num = reader.read(inbuf)) != -1)) {
457for (int i = 0; i  num; i++) {
458byte ch = inbuf[i];
459switch (ch) {
460case '\n':
461seenCR = false; // swallow CR before LF
462listener.handle(sb.toString());
463sb.setLength(0);
464rePos = pos + i + 1;
465break;
466case '\r':
467if (seenCR) {
468sb.append('\r');
469}
470seenCR = true;
471break;
472default:
473if (seenCR) {
474seenCR = false; // swallow final CR
475listener.handle(sb.toString());
476sb.setLength(0);
477rePos = pos + i + 1;
478}
479sb.append((char) ch); // add character, not its ascii 
value
480}
481}
482
483pos = reader.getFilePointer();
484}
485
486reader.seek(rePos); // Ensure we can re-read if necessary
487return rePos;
488}

At line 479, the conversion of byte to char type breaks the encoding.

  was:
I just realized there is a defect in the source code of 
org.apache.commons.io.input.Tailer.java. Basically, the current 
implementation does not work for multi-byte encoded files. See the following 
snippet,

448private long readLines(RandomAccessFile reader) throws IOException {
449StringBuilder sb = new StringBuilder();
450
451long pos = reader.getFilePointer();
452long rePos = pos; // position to re-read
453
454int num;
455boolean seenCR = false;
456while (run  ((num = reader.read(inbuf)) != -1)) {
457for (int i = 0; i  num; i++) {
458byte ch = inbuf[i];
459switch (ch) {
460case '\n':
461seenCR = false; // swallow CR before LF
462listener.handle(sb.toString());
463sb.setLength(0);
464rePos = pos + i + 1;
465break;
466case '\r':
467if (seenCR) {
468sb.append('\r');
469}
470seenCR = true;
471break;
472default:
473if (seenCR) {
474seenCR = false; // swallow final CR
475listener.handle(sb.toString());
476sb.setLength(0);
477rePos = pos + i + 1;
478}
479sb.append((char) ch); // add character, not its ascii 
value
480}
481}
482
483pos = reader.getFilePointer();
484}
485
486reader.seek(rePos); // Ensure we can re-read if necessary
487return rePos;
488}

At line 479, the conversion of byte to char types breaks the encoding.


 Commons IO Tailer does not respect UTF-8 Charset
 

 Key: IO-354
 URL: https://issues.apache.org/jira/browse/IO-354
 Project: Commons IO
  Issue Type: Bug
  Components: Utilities
Affects Versions: 2.3
 Environment: JDK 7 
 RHEL Linux
 Apache Commons IO version 2.4
Reporter: Liyu Yi
  Labels: Charset, Encoding, Tailer

 I just realized there is a defect in the source code of 
 org.apache.commons.io.input.Tailer.java. Basically, the current 
 implementation does not work for multi-byte encoded files. See the following 
 snippet,
 448private long readLines(RandomAccessFile reader) throws IOException {
 449StringBuilder sb = new StringBuilder();
 450
 451long pos = reader.getFilePointer();
 452long rePos = pos; // position to re-read
 453
 454int num;
 455boolean seenCR = false;
 456while (run  ((num = reader.read(inbuf)) != -1)) {
 457for (int i = 0; i  num; i++) {
 458byte ch = inbuf[i];
 459switch (ch) {
 460 

[jira] [Created] (MATH-883) getSquareRoot in EigenDecomposition

2012-10-26 Thread Gilles (JIRA)
Gilles created MATH-883:
---

 Summary: getSquareRoot in EigenDecomposition
 Key: MATH-883
 URL: https://issues.apache.org/jira/browse/MATH-883
 Project: Commons Math
  Issue Type: New Feature
Reporter: Gilles
Assignee: Gilles
Priority: Minor
 Fix For: 3.1


I propose to add a method getSquareRoot in class EigenDecomposition 
(package o.a.c.m.linear).
When assuming that the matrix is symmetric and positive definite, the 
implementation is trivial (see [By 
diagonalisation|http://en.wikipedia.org/wiki/Square_root_of_a_matrix]).

I would also suggest that the isSymmetric method be moved from 
EigenDecomposition to MatrixUtils.

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[jira] [Commented] (LANG-847) Add an isTrue and isFalse method to StringUtils

2012-10-26 Thread Gary Gregory (JIRA)

[ 
https://issues.apache.org/jira/browse/LANG-847?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=13485304#comment-13485304
 ] 

Gary Gregory commented on LANG-847:
---

This feels out of scope. What about other languages?

 Add an isTrue and isFalse method to StringUtils
 ---

 Key: LANG-847
 URL: https://issues.apache.org/jira/browse/LANG-847
 Project: Commons Lang
  Issue Type: Improvement
  Components: lang.*
Affects Versions: 3.x
Reporter: Dexter Fryar
Priority: Trivial
 Attachments: StringUtils.java.patchfile, 
 StringUtilsTest.java.patchfile

   Original Estimate: 2h
  Remaining Estimate: 2h

 Implement a common list of true / false statements with a helper method which 
 cleans and validates an input string.
 StringUtils.isFalse(OFF)
 StringUtils.isFalse(false)
 StringUtils.isFalse(   false)
 StringUtils.isFalse(false\n)
 StringUtils.isFalse(  false\r\n  )
 StringUtils.isFalse(  0\r\n  )
 StringUtils.isFalse(disable)
 StringUtils.isFalse(  disable\r\n  )
 StringUtils.isFalse(disabled)
 StringUtils.isFalse(  disabled\r\n  )
 StringUtils.isFalse(N)
 StringUtils.isFalse( N\n  )
 StringUtils.isFalse(NO)
 StringUtils.isFalse(NO\r\n  )
 StringUtils.isTrue(ON)
 StringUtils.isTrue(true)
 StringUtils.isTrue(   true)
 StringUtils.isTrue(true\n)
 StringUtils.isTrue(  true\r\n  )
 StringUtils.isTrue(  1\r\n  )
 StringUtils.isTrue(enable)
 StringUtils.isTrue(  enable\r\n  )
 StringUtils.isTrue(enabled)
 StringUtils.isTrue(  enabled\r\n  )
 StringUtils.isTrue(Y)
 StringUtils.isTrue( Y\n  )
 StringUtils.isTrue(YES)
 StringUtils.isTrue(YES\r\n  )

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