[jira] [Commented] (SPARK-17403) Fatal Error: SIGSEGV on Jdbc joins

2016-09-05 Thread Herman van Hovell (JIRA)

[ 
https://issues.apache.org/jira/browse/SPARK-17403?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15465808#comment-15465808
 ] 

Herman van Hovell commented on SPARK-17403:
---

Well then we sorta know where to look.

> Fatal Error: SIGSEGV on Jdbc joins
> --
>
> Key: SPARK-17403
> URL: https://issues.apache.org/jira/browse/SPARK-17403
> Project: Spark
>  Issue Type: Bug
>  Components: SQL
>Affects Versions: 2.0.0
> Environment: Spark standalone cluster (3 Workers, 47 cores)
> Ubuntu 14
> Java 8
>Reporter: Ruben Hernando
>
> The process creates views from JDBC (SQL server) source and combines them to 
> create other views.
> Finally it dumps results via JDBC
> Error:
> {quote}
> # JRE version: Java(TM) SE Runtime Environment (8.0_101-b13) (build 
> 1.8.0_101-b13)
> # Java VM: Java HotSpot(TM) 64-Bit Server VM (25.101-b13 mixed mode 
> linux-amd64 )
> # Problematic frame:
> # J 4895 C1 org.apache.spark.unsafe.Platform.getLong(Ljava/lang/Object;J)J (9 
> bytes) @ 0x7fbb355dfd6c [0x7fbb355dfd60+0xc]
> #
> {quote}
> SQL Query plan (fields truncated):
> {noformat}
> == Parsed Logical Plan ==
> 'Project [*]
> +- 'UnresolvedRelation `COEQ_63`
> == Analyzed Logical Plan ==
> InstanceId: bigint, price: double, ZoneId: int, priceItemId: int, priceId: int
> Project [InstanceId#20236L, price#20237, ZoneId#20239, priceItemId#20242, 
> priceId#20244]
> +- SubqueryAlias coeq_63
>+- Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
>   +- SubqueryAlias 6__input
>  +- 
> Relation[_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,TableP_DCID#148,TableSHID#149,SL_ACT_GI_DTE#150,SL_Xcl_C#151,SL_Xcl_C#152,SL_Css_Cojs#153L,SL_Config#154,SL_CREATEDON#
>  .. 36 more fields] JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables]. ... [...]  FROM [sch].[SLTables] [SLTables] JOIN sch.TPSLTables 
> TPSLTables ON [TPSLTables].[_TableSL_SID] = [SLTables].[_TableSL_SID] where 
> _TP = 24) input)
> == Optimized Logical Plan ==
> Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
> +- InMemoryRelation [_TableSL_SID#143L, _TableP_DC_SID#144L, 
> _TableSH_SID#145L, ID#146, Name#147, ... 36 more fields], true, 1, 
> StorageLevel(disk, memory, deserialized, 1 replicas)
>:  +- *Scan JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables].[_TableP_DC_SID], [SLTables].[_TableSH_SID], [SLTables].[ID], 
> [SLTables].[Name], [SLTables].[TableP_DCID], [SLTables].[TableSHID], 
> [TPSLTables].[SL_ACT_GI_DTE],  ... [...] FROM [sch].[SLTables] [SLTables] 
> JOIN sch.TPSLTables TPSLTables ON [TPSLTables].[_TableSL_SID] = 
> [SLTables].[_TableSL_SID] where _TP = 24) input) 
> [_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,TableP_DCID#148,TableSHID#149,SL_ACT_GI_DTE#150,SL_Xcl_C#151,...
>  36 more fields] 
> == Physical Plan ==
> *Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
> +- InMemoryTableScan [_TableSL_SID#143L, SL_RD_ColR_N#189]
>:  +- InMemoryRelation [_TableSL_SID#143L, _TableP_DC_SID#144L, 
> _TableSH_SID#145L, ID#146, Name#147, ... 36 more fields], true, 1, 
> StorageLevel(disk, memory, deserialized, 1 replicas)
>: :  +- *Scan JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables].[_TableP_DC_SID], [SLTables].[_TableSH_SID], [SLTables].[ID], 
> [SLTables].[Name], [SLTables].[TableP_DCID],  ... [...] FROM [sch].[SLTables] 
> [SLTables] JOIN sch.TPSLTables TPSLTables ON [TPSLTables].[_TableSL_SID] = 
> [SLTables].[_TableSL_SID] where _TP = 24) input) 
> [_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,,... 
> 36 more fields]
> {noformat}



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[jira] [Commented] (SPARK-17403) Fatal Error: SIGSEGV on Jdbc joins

2016-09-05 Thread Ruben Hernando (JIRA)

[ 
https://issues.apache.org/jira/browse/SPARK-17403?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15465539#comment-15465539
 ] 

Ruben Hernando commented on SPARK-17403:


You're right. Removing cache() errors disappeared

> Fatal Error: SIGSEGV on Jdbc joins
> --
>
> Key: SPARK-17403
> URL: https://issues.apache.org/jira/browse/SPARK-17403
> Project: Spark
>  Issue Type: Bug
>  Components: SQL
>Affects Versions: 2.0.0
> Environment: Spark standalone cluster (3 Workers, 47 cores)
> Ubuntu 14
> Java 8
>Reporter: Ruben Hernando
>
> The process creates views from JDBC (SQL server) source and combines them to 
> create other views.
> Finally it dumps results via JDBC
> Error:
> {quote}
> # JRE version: Java(TM) SE Runtime Environment (8.0_101-b13) (build 
> 1.8.0_101-b13)
> # Java VM: Java HotSpot(TM) 64-Bit Server VM (25.101-b13 mixed mode 
> linux-amd64 )
> # Problematic frame:
> # J 4895 C1 org.apache.spark.unsafe.Platform.getLong(Ljava/lang/Object;J)J (9 
> bytes) @ 0x7fbb355dfd6c [0x7fbb355dfd60+0xc]
> #
> {quote}
> SQL Query plan (fields truncated):
> {noformat}
> == Parsed Logical Plan ==
> 'Project [*]
> +- 'UnresolvedRelation `COEQ_63`
> == Analyzed Logical Plan ==
> InstanceId: bigint, price: double, ZoneId: int, priceItemId: int, priceId: int
> Project [InstanceId#20236L, price#20237, ZoneId#20239, priceItemId#20242, 
> priceId#20244]
> +- SubqueryAlias coeq_63
>+- Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
>   +- SubqueryAlias 6__input
>  +- 
> Relation[_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,TableP_DCID#148,TableSHID#149,SL_ACT_GI_DTE#150,SL_Xcl_C#151,SL_Xcl_C#152,SL_Css_Cojs#153L,SL_Config#154,SL_CREATEDON#
>  .. 36 more fields] JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables]. ... [...]  FROM [sch].[SLTables] [SLTables] JOIN sch.TPSLTables 
> TPSLTables ON [TPSLTables].[_TableSL_SID] = [SLTables].[_TableSL_SID] where 
> _TP = 24) input)
> == Optimized Logical Plan ==
> Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
> +- InMemoryRelation [_TableSL_SID#143L, _TableP_DC_SID#144L, 
> _TableSH_SID#145L, ID#146, Name#147, ... 36 more fields], true, 1, 
> StorageLevel(disk, memory, deserialized, 1 replicas)
>:  +- *Scan JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables].[_TableP_DC_SID], [SLTables].[_TableSH_SID], [SLTables].[ID], 
> [SLTables].[Name], [SLTables].[TableP_DCID], [SLTables].[TableSHID], 
> [TPSLTables].[SL_ACT_GI_DTE],  ... [...] FROM [sch].[SLTables] [SLTables] 
> JOIN sch.TPSLTables TPSLTables ON [TPSLTables].[_TableSL_SID] = 
> [SLTables].[_TableSL_SID] where _TP = 24) input) 
> [_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,TableP_DCID#148,TableSHID#149,SL_ACT_GI_DTE#150,SL_Xcl_C#151,...
>  36 more fields] 
> == Physical Plan ==
> *Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
> +- InMemoryTableScan [_TableSL_SID#143L, SL_RD_ColR_N#189]
>:  +- InMemoryRelation [_TableSL_SID#143L, _TableP_DC_SID#144L, 
> _TableSH_SID#145L, ID#146, Name#147, ... 36 more fields], true, 1, 
> StorageLevel(disk, memory, deserialized, 1 replicas)
>: :  +- *Scan JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables].[_TableP_DC_SID], [SLTables].[_TableSH_SID], [SLTables].[ID], 
> [SLTables].[Name], [SLTables].[TableP_DCID],  ... [...] FROM [sch].[SLTables] 
> [SLTables] JOIN sch.TPSLTables TPSLTables ON [TPSLTables].[_TableSL_SID] = 
> [SLTables].[_TableSL_SID] where _TP = 24) input) 
> [_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,,... 
> 36 more fields]
> {noformat}



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[jira] [Commented] (SPARK-17403) Fatal Error: SIGSEGV on Jdbc joins

2016-09-05 Thread Herman van Hovell (JIRA)

[ 
https://issues.apache.org/jira/browse/SPARK-17403?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15465383#comment-15465383
 ] 

Herman van Hovell commented on SPARK-17403:
---

[~rhernando] Could you try this without caching, and see if you run into 
trouble?

> Fatal Error: SIGSEGV on Jdbc joins
> --
>
> Key: SPARK-17403
> URL: https://issues.apache.org/jira/browse/SPARK-17403
> Project: Spark
>  Issue Type: Bug
>  Components: SQL
>Affects Versions: 2.0.0
> Environment: Spark standalone cluster (3 Workers, 47 cores)
> Ubuntu 14
> Java 8
>Reporter: Ruben Hernando
>
> The process creates views from JDBC (SQL server) source and combines them to 
> create other views.
> Finally it dumps results via JDBC
> Error:
> {quote}
> # JRE version: Java(TM) SE Runtime Environment (8.0_101-b13) (build 
> 1.8.0_101-b13)
> # Java VM: Java HotSpot(TM) 64-Bit Server VM (25.101-b13 mixed mode 
> linux-amd64 )
> # Problematic frame:
> # J 4895 C1 org.apache.spark.unsafe.Platform.getLong(Ljava/lang/Object;J)J (9 
> bytes) @ 0x7fbb355dfd6c [0x7fbb355dfd60+0xc]
> #
> {quote}
> SQL Query plan (fields truncated):
> {noformat}
> == Parsed Logical Plan ==
> 'Project [*]
> +- 'UnresolvedRelation `COEQ_63`
> == Analyzed Logical Plan ==
> InstanceId: bigint, price: double, ZoneId: int, priceItemId: int, priceId: int
> Project [InstanceId#20236L, price#20237, ZoneId#20239, priceItemId#20242, 
> priceId#20244]
> +- SubqueryAlias coeq_63
>+- Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
>   +- SubqueryAlias 6__input
>  +- 
> Relation[_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,TableP_DCID#148,TableSHID#149,SL_ACT_GI_DTE#150,SL_Xcl_C#151,SL_Xcl_C#152,SL_Css_Cojs#153L,SL_Config#154,SL_CREATEDON#
>  .. 36 more fields] JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables]. ... [...]  FROM [sch].[SLTables] [SLTables] JOIN sch.TPSLTables 
> TPSLTables ON [TPSLTables].[_TableSL_SID] = [SLTables].[_TableSL_SID] where 
> _TP = 24) input)
> == Optimized Logical Plan ==
> Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
> +- InMemoryRelation [_TableSL_SID#143L, _TableP_DC_SID#144L, 
> _TableSH_SID#145L, ID#146, Name#147, ... 36 more fields], true, 1, 
> StorageLevel(disk, memory, deserialized, 1 replicas)
>:  +- *Scan JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables].[_TableP_DC_SID], [SLTables].[_TableSH_SID], [SLTables].[ID], 
> [SLTables].[Name], [SLTables].[TableP_DCID], [SLTables].[TableSHID], 
> [TPSLTables].[SL_ACT_GI_DTE],  ... [...] FROM [sch].[SLTables] [SLTables] 
> JOIN sch.TPSLTables TPSLTables ON [TPSLTables].[_TableSL_SID] = 
> [SLTables].[_TableSL_SID] where _TP = 24) input) 
> [_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,TableP_DCID#148,TableSHID#149,SL_ACT_GI_DTE#150,SL_Xcl_C#151,...
>  36 more fields] 
> == Physical Plan ==
> *Project [_TableSL_SID#143L AS InstanceId#20236L, SL_RD_ColR_N#189 AS 
> price#20237, 24 AS ZoneId#20239, 6 AS priceItemId#20242, 63 AS priceId#20244]
> +- InMemoryTableScan [_TableSL_SID#143L, SL_RD_ColR_N#189]
>:  +- InMemoryRelation [_TableSL_SID#143L, _TableP_DC_SID#144L, 
> _TableSH_SID#145L, ID#146, Name#147, ... 36 more fields], true, 1, 
> StorageLevel(disk, memory, deserialized, 1 replicas)
>: :  +- *Scan JDBCRelation((select [SLTables].[_TableSL_SID], 
> [SLTables].[_TableP_DC_SID], [SLTables].[_TableSH_SID], [SLTables].[ID], 
> [SLTables].[Name], [SLTables].[TableP_DCID],  ... [...] FROM [sch].[SLTables] 
> [SLTables] JOIN sch.TPSLTables TPSLTables ON [TPSLTables].[_TableSL_SID] = 
> [SLTables].[_TableSL_SID] where _TP = 24) input) 
> [_TableSL_SID#143L,_TableP_DC_SID#144L,_TableSH_SID#145L,ID#146,Name#147,,... 
> 36 more fields]
> {noformat}



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