[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2019-06-19 Thread Robbie Zhang (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16868173#comment-16868173
 ] 

Robbie Zhang commented on IMPALA-7093:
--

Hi [~bharathv] , thanks for your comment. 

My fix only changes the behavior within one catalog update. The risks are:

  1) The ImpaladCatalog keeps the removed table/function objects

  2) The ImpaladCatalog doesn't replace stale table/function objects

For 1), I think it's alright unless for some reason the catalogd doesn't 
include the removed table/function objects into deleteLog_. But for 2), I do 
find a scenario in which it could happen. For example, when the catalogd is 
restarted while impala daemons are running, the catalog object versions are 
reset and might be lower than the version of objects in impala daemons. It will 
definitely break my fix. So I just came up with an idea to improve my fix. It's 
not so smart but it should work. I think my fix can be improved as:

  a) 
[ImpaladCatalog.addCatalogObject|https://github.com/apache/impala/blob/30c3cd95a42cacbfa2dbb0b29a4757745af942c3/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java#L291]
 removes existing table object first then adds it back, just as what we do for 
function objects;
  b) ImpaladCatalog.addCatalogObject adds the name of all updated 
table/function objects to a list or map, and 
[ImpaladCatalog.updateCatalog|https://github.com/apache/impala/blob/30c3cd95a42cacbfa2dbb0b29a4757745af942c3/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java#L226]
 removes all table/function object which are not in the list or map.

 With the above improvement, I believe the fix has no side effect as long as 
the performance is acceptable. How do you reckon?

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after a catalogd restart could transiently show tables not existing that in 
> fact exist.



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[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2019-06-19 Thread bharath v (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16868033#comment-16868033
 ] 

bharath v commented on IMPALA-7093:
---

I think the root cause of the problem is that, unlike other DDLs, the result of 
"invalidate metadata" propagates async and is not directly applied on the 
coordinator and may span multiple statestore updates.

Roughly, it is as follows.

1. Coordinator calls Catalog Server with execResetMetadata()
 2. Catalog server calls reset() and returns the latest version number of the 
Catalog server after reset()ing.
 3. Coordinator waits in WaitForMinCatalogUpdate() until the update version in 
step 2 is applied locally.

Between (2) and (3) statestore broadcast loop runs propagating the changes 
happened in reset(). Now depending when the statestore update propagation is 
scheduled, the "target version" of the update is already decided, which means 
that the subsequent update may or may not propagate the entire delta of reset() 
(which is potentially why the loop in step (3) can span multiple updates 
intervals).

Now if a partial update is applied and new queries are fired, we might see 
various weird errors like mentioned above. Thoughts? 

[~robbiezhang] I'm not super convinced about the fix. I'm wondering if there 
are any side effects of mixing older versions with newer top level objects. I 
see your point that the older objects are removed eventually by subsequent 
updates but I'm not convinced that it doesn't break anything else.

I'm also wondering if we should make "invalidate metadata" like any other DDL, 
basically by propagating the result as the DDL output and applying it right 
away. (the footprint could be bigger than usual, bunch of Dbs, functions, 
privileges, and a ton of IncompleteTables) .

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after a catalogd restart could transiently show tables not existing that in 
> fact exist.



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[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2019-06-19 Thread Robbie Zhang (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16867278#comment-16867278
 ] 

Robbie Zhang commented on IMPALA-7093:
--

I added a parameter --running-invalidate-metadata for 
tests/stress/concurrent_select.py to start a thread which keeps running 
'invalidate metadata'. By running concurrent_select.py with 
"--running-invalidate-metadata=true", I can reproduce this issue easily:
{code:java}
# tests/stress/concurrent_select.py --minicluster-num-impalads 3 
--max-queries=1000 --startup-queries-per-second=10 --tpch-db=tpch_parquet 
--running-invalidate-metadata=true
Cluster Impalad Version Info:
localhost: impalad version 3.3.0-SNAPSHOT DEBUG (build 
ab5ee0b7857c6ad19f244dc308210f2809436684)
Built on Tue Jun 18 05:04:27 PDT 2019
localhost: impalad version 3.3.0-SNAPSHOT DEBUG (build 
ab5ee0b7857c6ad19f244dc308210f2809436684)
Built on Tue Jun 18 05:04:27 PDT 2019
localhost: impalad version 3.3.0-SNAPSHOT DEBUG (build 
ab5ee0b7857c6ad19f244dc308210f2809436684)
Built on Tue Jun 18 05:04:27 PDT 2019
2019-06-18 06:24:39,494 27754 Thread-8 INFO:cluster[705]:Finding impalad binary 
location
2019-06-18 06:24:39,494 27754 Thread-7 INFO:cluster[705]:Finding impalad binary 
location
2019-06-18 06:24:39,494 27754 Thread-9 INFO:cluster[705]:Finding impalad binary 
location
2019-06-18 06:24:39,843 27754 MainThread INFO:queries[115]:Loading tpch queries
2019-06-18 06:24:39,843 27754 MainThread INFO:test_file_parser[336]:Loading 
tpch queries
Using 25 queries
2019-06-18 06:24:39,865 27754 MainThread INFO:concurrent_select[1508]:Number of 
queries in the list: 25
Done | Active | Executing | Mem Lmt Ex | AC Reject | AC Timeout | Cancel | Err 
| Incorrect | Next Qry Mem Lmt | Tot Qry Mem Lmt | Tracked Mem | RSS Mem
   0 |  0 | 0 |  0 | 0 |  0 |  0 |   0 
| 0 |0 |   0 | |
   5 | 43 |28 |  0 | 0 |  0 |  3 |   0 
| 0 |   92 |6802 | 617 |1964
   8 | 75 |39 |  0 | 0 |  0 |  5 |   0 
| 0 |  155 |   12286 |2693 |2521
Process Process-49:
Traceback (most recent call last):
  File "/usr/lib/python2.7/multiprocessing/process.py", line 258, in _bootstrap
self.run()
  File "/usr/lib/python2.7/multiprocessing/process.py", line 114, in run
self._target(*self._args, **self._kwargs)
  File "tests/stress/concurrent_select.py", line 663, in _start_single_runner
mesg=error_msg))
Exception: Query tpch_parquet_TPCH-Q16 ID None failed: AnalysisException: Could 
not resolve table reference: 'part'

Aborting due to 1 successive errors encountered
{code}
After I changed ImpaladCatalogd.java, concurrent_select.py can execute 1 
queries without exception:
{code:java}
9998 |  2 | 2 |  0 | 0 |  0 |   1018 |   0 
| 0 |  420 | 602 | |
Query runner (16866) exited with exit code 0
Query runner (15888) exited with exit code 0
1 |  0 | 0 |  0 | 0 |  0 |   1018 |   0 
| 0 |  420 |   0 | |
2019-06-18 23:11:38,444 15605 MainThread INFO:concurrent_select[844]:Test 
Duration: 12071 seconds
{code}
I also started another test in which concurrent_select.py starts 10 queries 
on another cluster. It's still in progress. Nearly 6 queries have been 
executed without exception so far.

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after 

[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2019-06-12 Thread Robbie Zhang (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16862718#comment-16862718
 ] 

Robbie Zhang commented on IMPALA-7093:
--

Thank you, [~tarmstrong]!

I find the problem is in 
[Catalogd.updateCatalog()|https://github.com/apache/impala/blob/ab908d54c22861967f693428ec7d9f6d7008607f/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java#L191].
 This function always adds top-level catalog objects first. When we run 
'invalidate metadata', it adds the database objects then table/view/function 
objects. But at that time the new database objects are empty, no 
table/view/function object in them. After function 
[Catalogd.addDB()|https://github.com/apache/impala/blob/ab908d54c22861967f693428ec7d9f6d7008607f/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java#L391]
 replaces the existing database objects with the new database objects, the 
existing table/view/function objects are lost until Catalogd.updateCatalog() 
adds these objects back. If the impalad compiles a query when the 
table/view/function objects disappear, the query will fail with 
AnalysisException. The error message various in the different type of queries. 
For example, for 'desc table', we can see 'Could not resolve path', for 'select 
* from table', we can see 'Could not resolve table reference', for 'insert into 
table', we can see 'Table does not exist', etc.

I can reproduce this issue by running two scripts. The first script keeps 
running 'invalidate metadata':
{code:java}
#!/bin/bash

while [ 1 ]
do
  shell/impala-shell -q "invalidate metadata" 
done

{code}
After I start the first script, I run the second script which keeps running a 
query: 
{code:java}
#!/bin/bash

while [ 1 ]
do
  #shell/impala-shell -q "desc test" 2>&1| tee test.output
  #shell/impala-shell -q "select * from test" 2>&1| tee test.output
  shell/impala-shell -q "insert overwrite test(i) values(1)" 2>&1| tee 
test.output
  n=`egrep "Fetched |Modified " test.output | wc -l`
  if [ $n -lt 1 ]; then
    exit
  fi
done{code}
The more table/view/function objects there are, the longer the objects 
disappear, and the easier the second script hit AnalysisException. I created 
thousands tables on my cluster. Sometimes the second script hit 
AnalysisException in a couple of minutes while sometimes it takes nearly half 
an hour. Anyway, it's repeatable.

I changed ImpaladCatalog.java as the following. So far, I haven't see the 
AnalysisException again. Seems the issue has gone.
{code:java}
diff --git a/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java 
b/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java
index 13cb620..23a7d68 100644
--- a/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java
+++ b/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java
@@ -20,6 +20,8 @@ package org.apache.impala.catalog;
 import java.nio.ByteBuffer;
 import java.util.ArrayDeque;
 import java.util.Set;
+import java.util.Map;
+import java.util.List;
 import java.util.concurrent.atomic.AtomicLong;
 import java.util.concurrent.atomic.AtomicReference;
 
@@ -388,6 +390,19 @@ public class ImpaladCatalog extends Catalog implements 
FeCatalog {
         existingDb.getCatalogVersion() < catalogVersion) {
       Db newDb = Db.fromTDatabase(thriftDb);
       newDb.setCatalogVersion(catalogVersion);
+      if (existingDb != null) {
+        // Migrant all existing table/view/function to newDb. Otherwise they
+        // will disappear temporarily.
+        for (Table tbl: existingDb.getTables()) {
+          newDb.addTable(tbl);
+        }
+        Map> functions = existingDb.getAllFunctions();
+        for (List fns: existingDb.getAllFunctions().values()) {
+          for (Function f: fns) {
+            newDb.addFunction(f);
+          }
+        }
+      }
       addDb(newDb);
       if (existingDb != null) {
         CatalogObjectVersionSet.INSTANCE.updateVersions(
{code}
Adding a lock into Catalog is another solution. But the change will be more 
complex. In my change, one possible problem is that if the new database object 
has less table/view/function objects than the existing database object, the 
deleted object might be left in Catalog forever. According to my test, the 
deleted objects should be in sequencer.getDeletedObjects() and will be removed 
by 
[ImpaladCatalog.removeCatalogObject()|https://github.com/apache/impala/blob/ab908d54c22861967f693428ec7d9f6d7008607f/fe/src/main/java/org/apache/impala/catalog/ImpaladCatalog.java#L229].
 So I think my change is fine. Please correct me if I'm wrong.

 

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>

[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2019-06-12 Thread Tim Armstrong (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16862590#comment-16862590
 ] 

Tim Armstrong commented on IMPALA-7093:
---

[~robbie] had a theory that this had the same root cause as IMPALA-5087

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after a catalogd restart could transiently show tables not existing that in 
> fact exist.



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[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2018-05-30 Thread Todd Lipcon (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16495808#comment-16495808
 ] 

Todd Lipcon commented on IMPALA-7093:
-

I've now managed to reproduce on trunk as well as some earlier versions (2.12, 
2.11). I've also reproed with -load_catalog_in_background set to both false and 
true. So, I don't think this is a regression after all.

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after a catalogd restart could transiently show tables not existing that in 
> fact exist.



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[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2018-05-30 Thread Todd Lipcon (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16495543#comment-16495543
 ] 

Todd Lipcon commented on IMPALA-7093:
-

Been digging a bit more. This seems to affect one cluster which has 
'load_catalog_in_background' set, but can't seem to repro on another cluster 
which does not.

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after a catalogd restart could transiently show tables not existing that in 
> fact exist.



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[jira] [Commented] (IMPALA-7093) Tables briefly appear to not exist after INVALIDATE METADATA or catalog restart

2018-05-29 Thread Todd Lipcon (JIRA)


[ 
https://issues.apache.org/jira/browse/IMPALA-7093?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16494542#comment-16494542
 ] 

Todd Lipcon commented on IMPALA-7093:
-

Testing on Impala 2.10 I haven't been able to reproduce this, so appears it 
might be a regression, though I'll continue to attempt it.

> Tables briefly appear to not exist after INVALIDATE METADATA or catalog 
> restart
> ---
>
> Key: IMPALA-7093
> URL: https://issues.apache.org/jira/browse/IMPALA-7093
> Project: IMPALA
>  Issue Type: Bug
>  Components: Catalog
>Affects Versions: Impala 2.12.0, Impala 2.13.0
>Reporter: Todd Lipcon
>Priority: Major
>
> I'm doing some stress testing of Impala 2.13 (recent snapshot build) and hit 
> the following sequence:
> {code}
>  {"query": "SHOW TABLES in consistency_test", "type": "call", "id": 3}
> {"type": "response", "id": 3, "results": [["t1"]]}
> {"query": "INVALIDATE METADATA", "type": "call", "id": 7}
> {"type": "response", "id": 7}
> {"query": "DESCRIBE consistency_test.t1", "type": "call", "id": 9}
> {"type": "response", "id": 9, "error": "AnalysisException: Could not resolve 
> path: 'consistency_test.t1'\n"}
> {code}
> i.e. 'SHOW TABLES' shows that a table exists, but then shortly after an 
> INVALIDATE METADATA, an attempt to describe a table indicates that the table 
> does not exist. This is a single-threaded test case against a single impalad.
> I also saw a similar behavior that issuing queries to an impalad shortly 
> after a catalogd restart could transiently show tables not existing that in 
> fact exist.



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