Re: [Jmol-users] Jmol and MediaWiki

2006-03-03 Thread Miguel

> There was some progress about mid 2005 in getting the Jmol applet
> working under Wikis. I am particularly interested in wikis running under
> MediaWiki. I want to be able to display Jmol molecular images on a
> regular basis on a wiki. Does anyone know whether there has been any
> progress since last July? I can not find anything.

Not much progress has been made.

Nico has done some work for MediaWiki.

I am very interested in making things work well with MediaWiki ... but I
am currently swamped with other things.


Miguel



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[Jmol-users] Jmol and MediaWiki

2006-03-03 Thread Brian Salter-Duke
There was some progress about mid 2005 in getting the Jmol applet
working under Wikis. I am particularly interested in wikis running under
MediaWiki. I want to be able to display Jmol molecular images on a
regular basis on a wiki. Does anyone know whether there has been any
progress since last July? I can not find anything.

Regards, Brian.

-- 
 Brian Salter-Duke (Brian Duke) [EMAIL PROTECTED]  
   Post: 626 Melbourne Rd, Spotswood, VIC, 3015, Australia
Phone 03-93992847. http://members.iinet.net.au/~linden1/brian/
Honorary Researcher Fellow, Dept. of Medicinal Chemistry, Monash Univ.



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Re: [Jmol-users] Can someone help me is using JmolAdapter?

2006-03-03 Thread Miguel

> A program I've written, which works perfectly inside NetBeans 5.0beta2,
> when exported into a jar file for distribution, fails with the following
> error:
>
> Exception in thread "main" java.lang.NoClassDefFoundError:
> org/jmol/api/JmolAdapter
> at jmakemol.cdnt.cdnt2(cdnt.java:473)
> at jmakemol.cdnt.(cdnt.java:58)
> at jmakemol.Main.main(Main.java:27)
>
> Is there anyone conversant with JmolAdapter etc., who can help me
> include it in the automatically generated jar file from NetBeans.

I am conversant with the JmolAdapter ... but don't know anything about
NetBeans.

You clearly have a build/make problem.

> If it compiles in NetBeans, I can't see why it should be
> left out of the jar file.

My guess is that the JmolAdapter class and other Jmol classes being pulled
from a .jar file (Jmol.jar?) ... like a library. Therefore, the classes
will not be 'extracted' from the library in order to be included in your
application .jar file.

Add Jmol.jar to your classpath (either as an environment variable or on
the command line) and it will work OK for you.


Miguel



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[Jmol-users] Can someone help me is using JmolAdapter?

2006-03-03 Thread David, Carl
A program I've written, which works perfectly inside NetBeans 5.0beta2,
when exported into a jar file for distribution, fails with the following
error:

Exception in thread "main" java.lang.NoClassDefFoundError:
org/jmol/api/JmolAdapter
at jmakemol.cdnt.cdnt2(cdnt.java:473)
at jmakemol.cdnt.(cdnt.java:58)
at jmakemol.Main.main(Main.java:27)

Is there anyone conversant with JmolAdapter etc., who can help me
include it in the automatically generated jar file from NetBeans. If it
compiles in NetBeans, I can't see why it should be left out of the jar
file.

Thanks for any help.
Sincerely,
Carl David

Department of Chemistry
University of Connecticut
Storrs, Connecticut 06269-3060
(860)486-3217 voice
(860)486-2981 fax
http://web.uconn.edu/~cdavid physical
http://web.uconn.edu/~ch3561vc quantum 
http://web.uconn.edu/~chem12x freshman
http://portfolio.uconn.edu/ePortfolio/showPublicPortfolio.do?personId=21
0
http://web.uconn.edu/~chem12x/HowToEMail.pdf



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