Re: [Jmol-users] 11.0 is ready
Bob Hanson wrote: > OK, Nico, anytime you want to build 11.0.RC1 (Is that what we are > calling it?) is OK with me. Nothing in the works from this end. I have > updated the interactive documentation to reflect 11.0 as a static entity > and 11.1 as the development version. > Ok, Jmol 11.0.RC1 is available at http://www.jmol.org/files/ (the RC means Release Candidate) From now on, there will be only bug fixes applied to Jmol 11.0 releases. A branch has been created in subversion for those bug fixes for Jmol 11.0 (branches/v11_0) After a few weeks of testing and bug fixing, Jmol 11.0.RCx will become Jmol 11.0, the first stable release in 11.0. New features will be added to Jmol 11.1 releases (the development version). Nico - Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys - and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
[Jmol-users] Models and Monitor
Greetings, I have a question regarding viewing different models of a protein. If I have file containing multiple models of the same protein, I can issue commands to select and color different regions, for example, and those commands works across all models. If I issue a monitor command, that appears to apply only to the current model. Is this a bug or a feature? How can I issue a monitor command that crosses models? Thanks, Craig Martin [EMAIL PROTECTED] - Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys - and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
[Jmol-users] 10.9.105 - color command breaks state
Hi Bob, while testing Jmol 10.9.105 I noticed that 'show state' doesn't work any more with our Jmol interface. A 'show state' after the script for the initial view doesn't provide any state info and no refresh is done any more (but Jmol still seems to work; java error message shown at the bottom). I could narrow this down to 'color cartoon' (also 'color ribbon', maybe others too?), if cartoon (ribbon) is not shown. So the easiest way to reproduce the problem should be: load example.pdb; color cartoon red; show state; While narrowing down the problem, I noticed that the script console in the application only parses the first line if something is pasted in. This is quite unhandy and differs from the behaviour of the applet script console. Regards, Rolf Java error message java.lang.NullPointerException at org.jmol.viewer.Mps$MpsShape.setShapeState(Mps.java:449) at org.jmol.viewer.Mps$Mpsmodel.setShapeState(Mps.java:158) at org.jmol.viewer.Mps.getShapeState(Mps.java:78) at org.jmol.viewer.Frame.getState(Frame.java:3332) at org.jmol.viewer.ModelManager.getState(ModelManager.java:1172) at org.jmol.viewer.Viewer.getStateInfo(Viewer.java:1828) at org.jmol.viewer.Eval.show(Eval.java:5161) at org.jmol.viewer.Eval.instructionDispatchLoop(Eval.java:700) at org.jmol.viewer.Eval.runEval(Eval.java:108) at org.jmol.viewer.Viewer.evalStringWaitStatus(Viewer.java:2551) at org.jmol.viewer.ScriptManager.runScript(ScriptManager.java:130) at org.jmol.viewer.ScriptManager.runNextScript(ScriptManager.java:119) at org.jmol.viewer.ScriptManager$ScriptQueueRunnable.run(ScriptManager.java:147) at java.lang.Thread.run(Thread.java:534) - Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys - and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
