You're right Bob, some of my scripts were using the simple integer notation and causing the problem. Works just fine now. Thanks.
Dean On 3/20/07 2:26 PM, "Bob Hanson" <[EMAIL PROTECTED]> wrote: > I think your problem is using simple integers like 1,2,3 in these more > complicated situations. Make sure you specify the background model > using the file.model convention -- 1.1 for the first model in the > first file, 1.2, for the second model in the first file, 2.1 for the > first model in the second file, etc. > > This worked for me on the following test: > load =1crn > data "append" > 2 > test > C 0 0 0 > O 1 1 1 > 2 > test > N 2 0 0 > O 2 1 1 > end "append"; > > backgroundModel = 1.1 > frame 2.1 > frame 2.2 > > etc. > > The two appended models are in the same file because XYZ files allow > for multiple models. If you use a data separator between the models, > like this: > > load 1.pdb > dataSeparator = "-----\n" > data "append" > 2 > test > C 0 0 0 > O 1 1 1 > ----- > 2 > test > N 2 0 0 > O 2 1 1 > end "append"; > > then the two data sets can be any format (not necessarily the same), > and they will end up in two separate "files". After this we would have > three models and three files: > > 1.1 1crn > 2.1 CO > 3.1 NO > > Bob > > > On 3/18/07, Dean Johnston <[EMAIL PROTECTED]> wrote: >> I can't seem to get "set backgroundModel n" to work when loading files >> using the inline append command with Jmol 11.1.22. It works just fine with >> the normal (non appended) inline files. Has anyone else tried this with >> appended file sets? >> >> On a related note, "show backgroundModel" always says "backgroundmodel = >> <not set>" whether it has been set or not. >> >> Dean >> >> >> >> ------------------------------------------------------------------------- >> Take Surveys. Earn Cash. Influence the Future of IT >> Join SourceForge.net's Techsay panel and you'll get the chance to share your >> opinions on IT & business topics through brief surveys-and earn cash >> http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV >> _______________________________________________ >> Jmol-users mailing list >> Jmol-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/jmol-users >> > > ------------------------------------------------------------------------- > Take Surveys. Earn Cash. Influence the Future of IT > Join SourceForge.net's Techsay panel and you'll get the chance to share your > opinions on IT & business topics through brief surveys-and earn cash > http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV > _______________________________________________ > Jmol-users mailing list > Jmol-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-users ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
