Re: [Jmol-users] display of contacts in two frames/models

2017-06-10 Thread Angel Herráez
Oh, thanks Bob

I should have known, since contacts are a kind of isosurface!  I knew ID is 
essential to have several at a time, but I missed that bit now.

This is going to look great!

Thanks


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Re: [Jmol-users] display of contacts in two frames/models

2017-06-10 Thread Robert Hanson
Not a bug. You just have to be careful to use the ID and atom selection
carefully

load =1blu
contact ID c1 {SF4}
load append =1d66
contact ID c2 {nucleic and 2.1}

If you leave off ID, then the two have the same default id, "contact1", and
so the first is lost when the second appears.
If you leave off "and 2.1", then you risk picking up contacts between the
two models or within the first.



On Sat, Jun 10, 2017 at 10:06 AM, Robert Hanson  wrote:

> definitely a bug.
>



-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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Re: [Jmol-users] display of contacts in two frames/models

2017-06-10 Thread Robert Hanson
definitely a bug.
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[Jmol-users] display of contacts in two frames/models

2017-06-09 Thread Angel Herráez
It seems that the result of "contact" cannot be present separately in the two 
frames when 2 models have been loaded. Only the latest generated set of 
contacts is displayed, and only in the current frame (even if  calculated from 
atoms in the other frame).

Is there a way around? We would like to have two frames, each with its 
contacts, and switch the display  between  the 2 frames

And yes, I am specifying the atoms of only one frame when I generate the 
contacts, like:
  frame 1; contact {Leu/1}{*/1 and not Leu}
  frame 2; contact {Leu/2}{*/2 and not Leu}


Thanks,


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