Re: [Jmol-users] jmol demo on sourceforge
Hi Jennifer Thanks for reporting this. However, I am seeing no problem. Please, 1.- Clear your Java cache (procedure described at http://wiki.jmol.org:81/index.php/Solving_Java_Problems#Java_cache 2. Clear your browser cache. Quit your browser and reopen it 3. Try the page. If the problem still persists, please report details: your browser, OS and Java versions, and any messages in the Java console. I assume that you mean the Jmol applet in the front page, not in the demo sections, right? - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
Angel- Thanks for the additional information about the protein cavities / isosurfaces. I tried following your advice about clearing my Java cache in order to get the Jmol applet on the front page to work, but my browser keeps getting a Page Load Error for the jmol wiki. I was having the same problem last week as well. Other websites work okay for me, so I can't figure out what the problem might be. On the other hand, I went back to the demo and this time it loaded just fine! (Last time it failed with both IE and Firefox..) -Jennifer Message: 10 Date: Wed, 01 Oct 2008 17:31:37 +0200 From: Angel Herraez [EMAIL PROTECTED] Subject: Re: [Jmol-users] jmol demo on sourceforge To: jmol-users@lists.sourceforge.net Message-ID: [EMAIL PROTECTED] Content-Type: text/plain; charset=US-ASCII Hi Jennifer Thanks for reporting this. However, I am seeing no problem. Please, 1.- Clear your Java cache (procedure described at http://wiki.jmol.org:81/index.php/Solving_Java_Problems#Java_cache 2. Clear your browser cache. Quit your browser and reopen it 3. Try the page. If the problem still persists, please report details: your browser, OS and Java versions, and any messages in the Java console. I assume that you mean the Jmol applet in the front page, not in the demo sections, right? - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
Hmm, I don't see that... could be a one-time event? On Wed, Oct 1, 2008 at 9:56 AM, Jennifer L. Muzyka [EMAIL PROTECTED] wrote: I just tried the demo on the jmol.sourceforge.net page, and I get a an error instead of the demo. The error says: java:security.AccessControlException. -Jennifer Jennifer Muzyka Professor of Chemistry On sabbatical at University of Kentucky College of Pharmacy Centre College Danville, KY 40422 [EMAIL PROTECTED] http://web.centre.edu/muzyka - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
I think problems like this have to do with domain issues. We see this sometimes with different web domain providers, but we haven't seen it at sourceForge. On Wed, Oct 1, 2008 at 12:28 PM, Robert Hanson [EMAIL PROTECTED] wrote: Hmm, I don't see that... could be a one-time event? On Wed, Oct 1, 2008 at 9:56 AM, Jennifer L. Muzyka [EMAIL PROTECTED] wrote: I just tried the demo on the jmol.sourceforge.net page, and I get a an error instead of the demo. The error says: java:security.AccessControlException. -Jennifer Jennifer Muzyka Professor of Chemistry On sabbatical at University of Kentucky College of Pharmacy Centre College Danville, KY 40422 [EMAIL PROTECTED] http://web.centre.edu/muzyka - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
One thought about the wiki not loading: I have the same problem for any link to the wiki that uses the port number. For example: http://wiki.jmol.org:81/index.php/Solving_Java_Problems#Java_cache will never load for me due to the :81 and our local firewall denying access. If I cut-and-paste the link into my browser's address box and then strip the port number out (so that it looks like: http://wiki.jmol.org/index.php/Solving_Java_Problems#Java_cache ), then the wiki pages load just fine... I'm not certain that is your problem as well, but it sounds very similar to my experience... -Tom On Wed, Oct 1, 2008 at 10:19 AM, Jennifer L. Muzyka [EMAIL PROTECTED] wrote: Angel- Thanks for the additional information about the protein cavities / isosurfaces. I tried following your advice about clearing my Java cache in order to get the Jmol applet on the front page to work, but my browser keeps getting a Page Load Error for the jmol wiki. I was having the same problem last week as well. Other websites work okay for me, so I can't figure out what the problem might be. On the other hand, I went back to the demo and this time it loaded just fine! (Last time it failed with both IE and Firefox..) -Jennifer Message: 10 Date: Wed, 01 Oct 2008 17:31:37 +0200 From: Angel Herraez [EMAIL PROTECTED] Subject: Re: [Jmol-users] jmol demo on sourceforge To: jmol-users@lists.sourceforge.net Message-ID: [EMAIL PROTECTED] Content-Type: text/plain; charset=US-ASCII Hi Jennifer Thanks for reporting this. However, I am seeing no problem. Please, 1.- Clear your Java cache (procedure described at http://wiki.jmol.org:81/index.php/Solving_Java_Problems#Java_cache 2. Clear your browser cache. Quit your browser and reopen it 3. Try the page. If the problem still persists, please report details: your browser, OS and Java versions, and any messages in the Java console. I assume that you mean the Jmol applet in the front page, not in the demo sections, right? - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
Tom- THANKS for the suggestion about stripping out the port number on the wiki URL. I did that and the page loaded in a jiffy! -Jennifer Message: 5 Date: Wed, 1 Oct 2008 10:58:10 -0700 From: Thomas Stout [EMAIL PROTECTED] Subject: Re: [Jmol-users] jmol demo on sourceforge To: jmol-users@lists.sourceforge.net Message-ID: [EMAIL PROTECTED] Content-Type: text/plain; charset=iso-8859-1 One thought about the wiki not loading: I have the same problem for any link to the wiki that uses the port number. For example: http://wiki.jmol.org:81/index.php/Solving_Java_Problems#Java_cache will never load for me due to the :81 and our local firewall denying access. If I cut-and-paste the link into my browser's address box and then strip the port number out (so that it looks like: http://wiki.jmol.org/index.php/Solving_Java_Problems#Java_cache ), then the wiki pages load just fine... I'm not certain that is your problem as well, but it sounds very similar to my experience... -Tom - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
So what's this port 81 thing? leaving that off changes it to the standard http port 80; I don't know of any system that allows you to use port 81 if port 80 is the right port. On Wed, Oct 1, 2008 at 1:17 PM, Jennifer L. Muzyka [EMAIL PROTECTED] wrote: Tom- THANKS for the suggestion about stripping out the port number on the wiki URL. I did that and the page loaded in a jiffy! -Jennifer Message: 5 Date: Wed, 1 Oct 2008 10:58:10 -0700 From: Thomas Stout [EMAIL PROTECTED] Subject: Re: [Jmol-users] jmol demo on sourceforge To: jmol-users@lists.sourceforge.net Message-ID: [EMAIL PROTECTED] Content-Type: text/plain; charset=iso-8859-1 One thought about the wiki not loading: I have the same problem for any link to the wiki that uses the port number. For example: http://wiki.jmol.org:81/index.php/Solving_Java_Problems#Java_cache will never load for me due to the :81 and our local firewall denying access. If I cut-and-paste the link into my browser's address box and then strip the port number out (so that it looks like: http://wiki.jmol.org/index.php/Solving_Java_Problems#Java_cache ), then the wiki pages load just fine... I'm not certain that is your problem as well, but it sounds very similar to my experience... -Tom - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/ ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100url=/___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] jmol demo on sourceforge
On Wed, Oct 1, 2008 at 10:08 PM, Robert Hanson [EMAIL PROTECTED] wrote:
So what's this port 81 thing? leaving that off changes it to the standard
http port 80; I don't know of any system that allows you to use port 81 if
port 80 is the right port.
The problem is with the hosting company on which the wiki is setup.
To be able to provide both PHP4 and PHP5 on shared computers, they have
decided that PHP4 will be available on port 80 (standard HTTP port) and PHP5
on port 81.
Since MediaWiki requires PHP5, all access are done through port 81 on the
wiki.
I have added a .htaccess file (contents below) to automatically redirect
request on port 80 to port 81, so that people accessing the wiki without
specifying the port will still have access to the wiki.
If anyone knows how to do this is an more cleaner way, please help :)
RewriteEngine on
RewriteCond %{SERVER_PORT} ^80$
RewriteRule ^(.*)$ http://%{HTTP_HOST}:81%{REQUEST_URI} [QSA,P]
Nico
-
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