Re: [Matplotlib-users] mplot3d bar3d errors

2010-01-27 Thread Reinier Heeres
Hi Derek,

I just tried your program with the latest svn version and that seems
to work fine, so I'd suggest you try that as well [1]. It looks to me
like the fix should be present in 0.99.1-2 too [2].

Please let me know if you still run into the same problem.

Cheers,
Reinier

[1] http://matplotlib.sourceforge.net/faq/installing_faq.html#install-from-svn
[2] 
http://sourceforge.net/projects/matplotlib/files/matplotlib/matplotlib-0.99.1/

On Wed, Jan 27, 2010 at 3:08 AM, Derek Schuff dsch...@purdue.edu wrote:
 Hi all,
 I'm getting strange errors trying to use the bar3d method in mplot3d
 (I'm using matplotlib 0.99.0 in Ubuntu 9.10 and Python 2.6).
 I'm doing something roughly like the example at
 http://matplotlib.sourceforge.net/examples/mplot3d/hist3d_demo.html
 I've pasted my sample program below, which has 2 cases: In case 1, you
 see just what you would expect: 2 rows of bars with increasing size in
 the y direction. if you uncomment case 2 (for different bar heights),
 you get the following error:

 Traceback (most recent call last):
  File /usr/lib/pymodules/python2.6/matplotlib/backends/backend_gtk.py,
 line 352, in expose_event
    self._render_figure(self._pixmap, w, h)
  File /usr/lib/pymodules/python2.6/matplotlib/backends/backend_gtkagg.py,
 line 75, in _render_figure
    FigureCanvasAgg.draw(self)
  File /usr/lib/pymodules/python2.6/matplotlib/backends/backend_agg.py,
 line 314, in draw
    self.figure.draw(self.renderer)
  File /usr/lib/pymodules/python2.6/matplotlib/artist.py, line 46,
 in draw_wrapper
    draw(artist, renderer, *kl)
  File /usr/lib/pymodules/python2.6/matplotlib/figure.py, line 774, in draw
    for a in self.axes: a.draw(renderer)
  File /usr/lib/pymodules/python2.6/mpl_toolkits/mplot3d/axes3d.py,
 line 135, in draw
    for col in self.collections]
  File /usr/lib/pymodules/python2.6/mpl_toolkits/mplot3d/art3d.py,
 line 334, in do_3d_projection
    z_segments_2d.sort(reverse=True)
 ValueError: The truth value of an array with more than one element is
 ambiguous. Use a.any() or a.all()

 This error gets thrown any time the 2 bars in the same y position have
 exactly the same z value: in the sample program the (0,0) value and
 (0,1) value are both 1 but it works for any of the 4 pairs. The error
 is particularly confusing. even looking at the source of the sort line
 in the backtrace, it's not clear where any arrays are being used as
 truth values. (just compared for the sort). This can be worked around
 by adding a tiny delta to the z values in one of the rows: it only
 errors when the corresponding z values match exactly.
 Am I doing something wrong here? or is this some kind of bug in the
 drawing code?
 thanks,
 -Derek

 the program:
 #!/usr/bin/env python2.6
 import matplotlib.pyplot as plot
 import mpl_toolkits.mplot3d
 import numpy
 fig2 = plot.figure()
 ax2 = mpl_toolkits.mplot3d.Axes3D(fig2)
 xpos = numpy.asarray([0, 1, 2, 4, 0, 1, 2, 4])
 ypos = numpy.asarray([0, 0, 0, 0, 1, 1, 1, 1])
 zpos = numpy.zeros_like(xpos)
 dx = 0.05 * numpy.ones_like(zpos)
 dy = numpy.ones_like(zpos)
 #case 1
 dz = numpy.asarray([1,2,3,4,5,6,7,8])
 #case 2
 #dz = numpy.asarray([1,2,3,4,1,6,7,8])
 ax2.bar3d(ypos, xpos, zpos, dy, dx, dz, color='b')
 ax2.set_xlabel('X')
 ax2.set_ylabel('Y')
 ax2.set_zlabel('Z')
 plot.show()

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[Matplotlib-users] How to change tick labels?

2010-01-27 Thread Yannick Copin
Hi,

I have a very crowded plot with lots of subplots, and tick labels tend to 
overlap. I wanted to drop e.g. the 1st and last x-tick labels for each 
subplot, doing something like:

ax = P.subplot(1,1,1)
ax.plot([1,2,3,2,1,2,3])
ax.set_xticklabels(['']+
[ lbl.get_text() for lbl in ax.get_xticklabels()[1:-1] ]+
[''])

This works in interactive 'ipython -pylab', but this does not work anymore in 
a script: in my script, the tick label returned by ax.get_xticklabels() are 
all empty strings:

print [ lbl.get_text() for lbl in ax.get_xticklabels() ]

returns

['', '', '', '', '', '', '']

It seems the tick text strings are filled in only at the very last moment (at 
show() time?).

Any help out there?

Cheers,
-- 
.~.   Yannick COPIN  (o:*  Doctus cum libro
/V\   Institut de physique nucléaire de Lyon
   // \\  Université de Lyon - CNRS-IN2P3
  /(   )\ AIM: YnCopin ICQ: 236931013
   ^`~'^  http://snovae.in2p3.fr/ycopin/



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[Matplotlib-users] defining/saving contours without plotting

2010-01-27 Thread Jonathan Slavin
To matplotusers:

I want to create a plot that has an image and overplots contours, but
the contours are defined relative to different data from that plotted in
the image.  Is there a way to save contour line data rather than plot
it.  

It just occurred to me a way of creating the plot -- but I'm still
interested in a way to save contour data.

Jon
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[Matplotlib-users] plot coordinates points

2010-01-27 Thread franck kalala
Hey all

how to plot a point coordinates in matplotlib?
 I want for example to plot the point of
 coordinates x=1.2,y=2.5

Cheers


  

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Re: [Matplotlib-users] plot coordinates points

2010-01-27 Thread Matthias Michler
Hi,

do you mean a single point with coordinates x and y like

plot([1.2], [2.5], marker='+')

Regards,
Matthias

On Wednesday 27 January 2010 17:26:39 franck kalala wrote:
 Hey all

 how to plot a point coordinates in matplotlib?
  I want for example to plot the point of
  coordinates x=1.2,y=2.5

 Cheers


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Re: [Matplotlib-users] defining/saving contours without plotting

2010-01-27 Thread Matthias Michler
Hi Jon,

one thing you can do is to get the (x, y)-values of the calculated 
contourlines:

cs = plt.contour(z, levels=[0])
a = cs.collections[0].get_paths()[0].vertices
# - array of shape (..., 2) hold x and y in first and second column

I don't know wheter this is the best way, but at least for me it works.

Kind regards,
Matthias

On Wednesday 27 January 2010 15:14:27 Jonathan Slavin wrote:
 To matplotusers:

 I want to create a plot that has an image and overplots contours, but
 the contours are defined relative to different data from that plotted in
 the image.  Is there a way to save contour line data rather than plot
 it.

 It just occurred to me a way of creating the plot -- but I'm still
 interested in a way to save contour data.

 Jon



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