Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2012-01-30 Thread Tony Yu
On Sun, Jan 29, 2012 at 10:10 PM, C M cmpyt...@gmail.com wrote:



 On Wed, Jan 4, 2012 at 2:19 PM, Benjamin Root ben.r...@ou.edu wrote:



 On Wednesday, January 4, 2012, jeffsp jef...@gmail.com wrote:
 
  plt.tight_layout(), sweet
 
  it still makes the labels too close to read, even if they don't overlap.
  that is, they're just a continuous string of numbers with no whitespace
  between.
 
  it does clean up the rest of the plot really nicely, though, without
 having
  to continually dick around with subplots_adjust
 
 

 Well, it is a new feature with plenty of room for improvements.  Maybe
 some sort of mindist parameter would be useful to establish a minimum
 distance between text objects?

 Ben Root


 Something like that sounds good.  If there were a way to make it the
 default that labels would never overlap (but that default could be toggled
 for those who, somehow, want to not be able to read their labels?), that
 strikes me as best.

 In the meantime, what are other ways to do this?


Just to clarify, I don't think improvements to `tight_layout` will fix your
issues with tick layout; `tight_layout` adjusts the subplot spacing, not
the spacing of tick labels.

If you just want to prevent overlap in the static case, you can just set
the tick labels yourself, e.g. `plt.xticks([1, 2, 3])`. If you want
something automatic and dynamic, ...

I believe this is actually a pretty difficult problem to solve in the
general case. I've implemented a hacky attempt
herehttps://gist.github.com/1708133,
but it leaves out a lot of common use cases (e.g. subplots) and doesn't
account for spacing between the axes and figure.

-Tony
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Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2012-01-29 Thread C M
On Wed, Jan 4, 2012 at 2:19 PM, Benjamin Root ben.r...@ou.edu wrote:



 On Wednesday, January 4, 2012, jeffsp jef...@gmail.com wrote:
 
  plt.tight_layout(), sweet
 
  it still makes the labels too close to read, even if they don't overlap.
  that is, they're just a continuous string of numbers with no whitespace
  between.
 
  it does clean up the rest of the plot really nicely, though, without
 having
  to continually dick around with subplots_adjust
 
 

 Well, it is a new feature with plenty of room for improvements.  Maybe
 some sort of mindist parameter would be useful to establish a minimum
 distance between text objects?

 Ben Root


Something like that sounds good.  If there were a way to make it the
default that labels would never overlap (but that default could be toggled
for those who, somehow, want to not be able to read their labels?), that
strikes me as best.

In the meantime, what are other ways to do this?
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Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2012-01-04 Thread jeffsp

I have been wondering the same thing.  Matlab is able to prevent labels from
overlapping each other.  Why can't matplotlib?


Chris Rodgers-7 wrote:
 
 Hi
 
 Whenever I create figures with at least 3x3 subplots, the x-tick
 labels overlap with each other and they also overlap with the title of
 the adjacent subplot, rendering the entire figure illegible. I know
 that I can fine-tune the plot to look exactly the way I want with
 wspace and hspace for instance, but I don't understand why this is
 the default behavior. I wonder if I have a system font issue, such
 that matplotlib thinks the fonts are smaller than they really are.
 
 My questions:
 1) Is this the intended behavior of matplotlib, or is there something
 wrong with my installation?
 2) Assuming I don't have an installation issue, is there a very
 general parameter I can change so that the overlap doesn't occur,
 rather than manually adjusting every figure?
 
 
 Minimal code to reproduce the problem:
 
 import numpy as np
 import matplotlib.pyplot as plt
 plt.figure()
 plt.subplot(331)
 plt.subplot(334)
 plt.plot(np.arange(1))
 plt.title('Title')
 plt.show()
 
 
 I'm attaching the output figure, although I'm not sure if the list
 accepts attachments. The x-tick labels on subplot 334 overlap each
 other, and the title of subplot 334 overlaps with the x-tick labels in
 subplot 331.
 
 
 System:
 Ubuntu 10.04 x64
 All packages are the stable versions from Synaptic, including ipython,
 python, numpy, matplotlib 0.99.1.1
 I've also tried the Enthought distribution with matplotlib 1.0.1 and
 the results are the same
 I've tried both Wx and Tk backends and the results are the same
 I've tried `matplotlib.rcParams['xtick.labelsize'] = 'x-small'`, and
 this does make the labels smaller, but for sufficiently large numbers
 the overlap still occurs.
 
 Thanks for any help!
 Chris
 
  
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Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2012-01-04 Thread Tony Yu
On Wed, Jan 4, 2012 at 1:14 PM, jeffsp jef...@gmail.com wrote:


 I have been wondering the same thing.  Matlab is able to prevent labels
 from
 overlapping each other.  Why can't matplotlib?


 Chris Rodgers-7 wrote:
 
  Hi
 
  Whenever I create figures with at least 3x3 subplots, the x-tick
  labels overlap with each other and they also overlap with the title of
  the adjacent subplot, rendering the entire figure illegible. I know
  that I can fine-tune the plot to look exactly the way I want with
  wspace and hspace for instance, but I don't understand why this is
  the default behavior. I wonder if I have a system font issue, such
  that matplotlib thinks the fonts are smaller than they really are.
 
  My questions:
  1) Is this the intended behavior of matplotlib, or is there something
  wrong with my installation?
  2) Assuming I don't have an installation issue, is there a very
  general parameter I can change so that the overlap doesn't occur,
  rather than manually adjusting every figure?
 
 
  Minimal code to reproduce the problem:
 
  import numpy as np
  import matplotlib.pyplot as plt
  plt.figure()
  plt.subplot(331)
  plt.subplot(334)
  plt.plot(np.arange(1))
  plt.title('Title')
  plt.show()
 
 
  I'm attaching the output figure, although I'm not sure if the list
  accepts attachments. The x-tick labels on subplot 334 overlap each
  other, and the title of subplot 334 overlaps with the x-tick labels in
  subplot 331.


Have you try calling `plt.tight_layout()` right before `plt.show()`?

-Tony

 
  System:
  Ubuntu 10.04 x64
  All packages are the stable versions from Synaptic, including ipython,
  python, numpy, matplotlib 0.99.1.1
  I've also tried the Enthought distribution with matplotlib 1.0.1 and
  the results are the same
  I've tried both Wx and Tk backends and the results are the same
  I've tried `matplotlib.rcParams['xtick.labelsize'] = 'x-small'`, and
  this does make the labels smaller, but for sufficiently large numbers
  the overlap still occurs.
 
  Thanks for any help!
  Chris


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Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2012-01-04 Thread jeffsp

plt.tight_layout(), sweet

it still makes the labels too close to read, even if they don't overlap. 
that is, they're just a continuous string of numbers with no whitespace
between.

it does clean up the rest of the plot really nicely, though, without having
to continually dick around with subplots_adjust


Tony Yu-3 wrote:
 
 On Wed, Jan 4, 2012 at 1:14 PM, jeffsp jef...@gmail.com wrote:
 

 I have been wondering the same thing.  Matlab is able to prevent labels
 from
 overlapping each other.  Why can't matplotlib?


 Chris Rodgers-7 wrote:
 
  Hi
 
  Whenever I create figures with at least 3x3 subplots, the x-tick
  labels overlap with each other and they also overlap with the title of
  the adjacent subplot, rendering the entire figure illegible. I know
  that I can fine-tune the plot to look exactly the way I want with
  wspace and hspace for instance, but I don't understand why this is
  the default behavior. I wonder if I have a system font issue, such
  that matplotlib thinks the fonts are smaller than they really are.
 
  My questions:
  1) Is this the intended behavior of matplotlib, or is there something
  wrong with my installation?
  2) Assuming I don't have an installation issue, is there a very
  general parameter I can change so that the overlap doesn't occur,
  rather than manually adjusting every figure?
 
 
  Minimal code to reproduce the problem:
 
  import numpy as np
  import matplotlib.pyplot as plt
  plt.figure()
  plt.subplot(331)
  plt.subplot(334)
  plt.plot(np.arange(1))
  plt.title('Title')
  plt.show()
 
 
  I'm attaching the output figure, although I'm not sure if the list
  accepts attachments. The x-tick labels on subplot 334 overlap each
  other, and the title of subplot 334 overlaps with the x-tick labels in
  subplot 331.

 
 Have you try calling `plt.tight_layout()` right before `plt.show()`?
 
 -Tony
 
 
  System:
  Ubuntu 10.04 x64
  All packages are the stable versions from Synaptic, including ipython,
  python, numpy, matplotlib 0.99.1.1
  I've also tried the Enthought distribution with matplotlib 1.0.1 and
  the results are the same
  I've tried both Wx and Tk backends and the results are the same
  I've tried `matplotlib.rcParams['xtick.labelsize'] = 'x-small'`, and
  this does make the labels smaller, but for sufficiently large numbers
  the overlap still occurs.
 
  Thanks for any help!
  Chris


 
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Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2012-01-04 Thread Benjamin Root
On Wednesday, January 4, 2012, jeffsp jef...@gmail.com wrote:

 plt.tight_layout(), sweet

 it still makes the labels too close to read, even if they don't overlap.
 that is, they're just a continuous string of numbers with no whitespace
 between.

 it does clean up the rest of the plot really nicely, though, without
having
 to continually dick around with subplots_adjust



Well, it is a new feature with plenty of room for improvements.  Maybe some
sort of mindist parameter would be useful to establish a minimum distance
between text objects?

Ben Root
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[Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2011-05-06 Thread Chris Rodgers
Hi

Whenever I create figures with at least 3x3 subplots, the x-tick
labels overlap with each other and they also overlap with the title of
the adjacent subplot, rendering the entire figure illegible. I know
that I can fine-tune the plot to look exactly the way I want with
wspace and hspace for instance, but I don't understand why this is
the default behavior. I wonder if I have a system font issue, such
that matplotlib thinks the fonts are smaller than they really are.

My questions:
1) Is this the intended behavior of matplotlib, or is there something
wrong with my installation?
2) Assuming I don't have an installation issue, is there a very
general parameter I can change so that the overlap doesn't occur,
rather than manually adjusting every figure?


Minimal code to reproduce the problem:

import numpy as np
import matplotlib.pyplot as plt
plt.figure()
plt.subplot(331)
plt.subplot(334)
plt.plot(np.arange(1))
plt.title('Title')
plt.show()


I'm attaching the output figure, although I'm not sure if the list
accepts attachments. The x-tick labels on subplot 334 overlap each
other, and the title of subplot 334 overlaps with the x-tick labels in
subplot 331.


System:
Ubuntu 10.04 x64
All packages are the stable versions from Synaptic, including ipython,
python, numpy, matplotlib 0.99.1.1
I've also tried the Enthought distribution with matplotlib 1.0.1 and
the results are the same
I've tried both Wx and Tk backends and the results are the same
I've tried `matplotlib.rcParams['xtick.labelsize'] = 'x-small'`, and
this does make the labels smaller, but for sufficiently large numbers
the overlap still occurs.

Thanks for any help!
Chris
attachment: output.png--
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[Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2011-05-05 Thread Chris Rodgers
Hi

Whenever I create figures with at least 3x3 subplots, the x-tick
labels overlap with each other and they also overlap with the title of
the adjacent subplot, rendering the entire figure illegible. I know
that I can fine-tune the plot to look exactly the way I want with
wspace and hspace for instance, but I don't understand why this is
the default behavior. I wonder if I have a system font issue, such
that matplotlib thinks the fonts are smaller than they really are.

My questions:
1) Is this the intended behavior of matplotlib, or is there something
wrong with my installation?
2) Assuming I don't have an installation issue, is there a very
general parameter I can change so that the overlap doesn't occur,
rather than manually adjusting every figure?


Minimal code to reproduce the problem:

import numpy as np
import matplotlib.pyplot as plt
plt.figure()
plt.subplot(331)
plt.subplot(334)
plt.plot(np.arange(1))
plt.title('Title')
plt.show()


I'm attaching the output figure, although I'm not sure if the list
accepts attachments. The x-tick labels on subplot 334 overlap each
other, and the title of subplot 334 overlaps with the x-tick labels in
subplot 331.


System:
Ubuntu 10.04 x64
All packages are the stable versions from Synaptic, including ipython,
python, numpy, matplotlib 0.99.1.1
I've also tried the Enthought distribution with matplotlib 1.0.1 and
the results are the same
I've tried both Wx and Tk backends and the results are the same
I've tried `matplotlib.rcParams['xtick.labelsize'] = 'x-small'`, and
this does make the labels smaller, but for sufficiently large numbers
the overlap still occurs.

Thanks for any help!
Chris
attachment: output.png--
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Re: [Matplotlib-users] Subplot x-tick labels overlap with each other and with titles

2011-05-05 Thread Goyo
2011/5/5 Chris Rodgers chris.rodg...@berkeley.edu:
 1) Is this the intended behavior of matplotlib, or is there something
 wrong with my installation?

This is by design, hspace and vspace are proportional to the size of
each subplot. Also the number of ticks does not depend on the subplot
or labels size (using the default locator). So you have to fine tune
if things don't fit together. Of course you can write custom
subplot-like functions which take care of this the way you find more
convenient.

I wonder how other plotting packages deal with this.

Goyo

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