Re: ERROR 1 (HY000): Can't create/write to file '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13)
Hi everybody! Peng Yu wrote: > Hi, > > I run the following command. But I got the following error. I'm not > sure what causes the problem. I have seen the same issue before, but > it disappeared even I didn't take any action. Could anybody let me > know how to fix the problem? > > mysql -ugenome -hgenome-mysql.cse.ucsc.edu mm9 -A > > mysql> select geneName as symbol, name as refSeq, chrom, strand, > txStart, txEnd from refFlat group by refSeq having count(*)=1; > ERROR 1 (HY000): Can't create/write to file > '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13) > "Errcode" is what mySQL writes for an "errno" value. First, you need to find out what the error number 13 means: joerg@machine:~$ fgrep 13 /usr/include/asm-generic/errno-base.h #define EACCES 13 /* Permission denied */ Then (unless you know that already), check the "man" pages to find when the calls would return EACCESS. In this case, the candidate calls are "creat()" and "write()". man 2 write the output doesn't mention EACCESS. man 2 creat will tell you this: ERRORS EACCES The requested access to the file is not allowed, or search permission is denied for one of the directories in the path prefix of pathname, or the file did not exist yet and write access to the parent directory is not allowed. (See also path_resolution(7).) So it is a permission issue for either the file, or the directory hierarchy leading to it. See the other replies for the specific things to check. Regards, Jörg -- Joerg Bruehe, MySQL Build Team, joerg.bru...@oracle.com ORACLE Deutschland B.V. & Co. KG, Komturstrasse 18a, D-12099 Berlin Geschaeftsfuehrer: Juergen Kunz, Marcel v.d. Molen, Alexander v.d. Ven Amtsgericht Muenchen: HRA 95603 -- MySQL General Mailing List For list archives: http://lists.mysql.com/mysql To unsubscribe:http://lists.mysql.com/mysql?unsub=arch...@jab.org
Re: ERROR 1 (HY000): Can't create/write to file '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13)
On Tue, Jan 18, 2011 at 6:24 AM, sushant chawla wrote: > Make sure the following things: > > > - /tmp folder is having 1777 permissions > - mysql folder is having the ownership from which it is running. Refer > /etc/my.cnf > - Make sure you have space on your MySQL partition > Also, make sure you have room where MySQL puts it's temp files (possibly /tmp or /var/tmp, check "show global variables like '%tmpdir%';"). This may mean that the server couldn't write a temporary sorting file or something similar to disk. -- Bier met grenadyn Is als mosterd by den wyn Sy die't drinkt, is eene kwezel Hy die't drinkt, is ras een ezel
Re: ERROR 1 (HY000): Can't create/write to file '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13)
Make sure the following things: - /tmp folder is having 1777 permissions - mysql folder is having the ownership from which it is running. Refer /etc/my.cnf - Make sure you have space on your MySQL partition Regards Sushant Chawla On Tue, Jan 18, 2011 at 10:51 AM, Yogesh Kore wrote: > May be db files are not as MySQL user. Check owner ship for the files of > the > table. > It should be mysql user ownership. > > On Tue, Jan 18, 2011 at 6:36 AM, Peng Yu wrote: > > > Hi, > > > > I run the following command. But I got the following error. I'm not > > sure what causes the problem. I have seen the same issue before, but > > it disappeared even I didn't take any action. Could anybody let me > > know how to fix the problem? > > > > mysql -ugenome -hgenome-mysql.cse.ucsc.edu mm9 -A > > > > mysql> select geneName as symbol, name as refSeq, chrom, strand, > > txStart, txEnd from refFlat group by refSeq having count(*)=1; > > ERROR 1 (HY000): Can't create/write to file > > '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13) > > > > -- > > Regards, > > Peng > > > > -- > > MySQL General Mailing List > > For list archives: http://lists.mysql.com/mysql > > To unsubscribe: > http://lists.mysql.com/mysql?unsub=yogeshk...@gmail.com > > > > >
Re: ERROR 1 (HY000): Can't create/write to file '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13)
May be db files are not as MySQL user. Check owner ship for the files of the table. It should be mysql user ownership. On Tue, Jan 18, 2011 at 6:36 AM, Peng Yu wrote: > Hi, > > I run the following command. But I got the following error. I'm not > sure what causes the problem. I have seen the same issue before, but > it disappeared even I didn't take any action. Could anybody let me > know how to fix the problem? > > mysql -ugenome -hgenome-mysql.cse.ucsc.edu mm9 -A > > mysql> select geneName as symbol, name as refSeq, chrom, strand, > txStart, txEnd from refFlat group by refSeq having count(*)=1; > ERROR 1 (HY000): Can't create/write to file > '/var/lib/mysql/#sql_9e1_0.MYI' (Errcode: 13) > > -- > Regards, > Peng > > -- > MySQL General Mailing List > For list archives: http://lists.mysql.com/mysql > To unsubscribe:http://lists.mysql.com/mysql?unsub=yogeshk...@gmail.com > >
