[Bug 1105730] Review Request: seqan-devel - Open source C++ library of efficient algorithms and data structures

2014-06-10 Thread bugzilla
https://bugzilla.redhat.com/show_bug.cgi?id=1105730



--- Comment #5 from Dave Love  ---
I (my users) don't need the tools as far as I know.  I assumed the whole thing
should be built, but I don't know how that fits with any policy or anyone
else's
possible needs.  I only did seqan for tophat, so I don't really care, and am
happy if tophat appears somehow.

I don't currently have sponsorship, so it wouldn't make sense for me to take it
over,
and I'm not clever enough to hack C++ in a reasonable time to get tophat
built against this version :-/.

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[Bug 1105730] Review Request: seqan-devel - Open source C++ library of efficient algorithms and data structures

2014-06-09 Thread bugzilla
https://bugzilla.redhat.com/show_bug.cgi?id=1105730



--- Comment #4 from Antonio Trande  ---
(In reply to Dave Love from comment #3)
> Calling it seqan would presumably cause trouble if anyone wants the tools
> rather
> than just the headers.  The packaging I unfortunately did simultaneously,
> (see #717473)
> includes both, like the Debian package.
> 
> I assume it's clear that tophat won't currently build with this version.

Hi Dave.

If you need a complete packaging of SeqAn (headers + tools), I'm willing to
leave to you this package; later, I'll review it.

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[Bug 1105730] Review Request: seqan-devel - Open source C++ library of efficient algorithms and data structures

2014-06-09 Thread bugzilla
https://bugzilla.redhat.com/show_bug.cgi?id=1105730

Dave Love  changed:

   What|Removed |Added

 CC||d.l...@liv.ac.uk



--- Comment #3 from Dave Love  ---
Calling it seqan would presumably cause trouble if anyone wants the tools
rather
than just the headers.  The packaging I unfortunately did simultaneously, (see
#717473)
includes both, like the Debian package.

I assume it's clear that tophat won't currently build with this version.

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[Bug 1105730] Review Request: seqan-devel - Open source C++ library of efficient algorithms and data structures

2014-06-06 Thread bugzilla
https://bugzilla.redhat.com/show_bug.cgi?id=1105730



--- Comment #2 from Christopher Meng  ---
Ths package should be named as seqan although it's a header-only package.

https://fedoraproject.org/wiki/Packaging:Guidelines#Packaging_Header_Only_Libraries

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[Bug 1105730] Review Request: seqan-devel - Open source C++ library of efficient algorithms and data structures

2014-06-06 Thread bugzilla
https://bugzilla.redhat.com/show_bug.cgi?id=1105730

Christopher Meng  changed:

   What|Removed |Added

 Blocks||505154 (FE-SCITECH), 708402
   ||(tophat)
 CC||bl...@verdurin.com



--- Comment #1 from Christopher Meng  ---
*** Bug 717473 has been marked as a duplicate of this bug. ***


Referenced Bugs:

https://bugzilla.redhat.com/show_bug.cgi?id=505154
[Bug 505154] Tracker: Review Requests for Science and Technology related
packages
https://bugzilla.redhat.com/show_bug.cgi?id=708402
[Bug 708402] Review Request: tophat - A spliced read mapper for RNA-Seq
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