[Paraview] Import a four-dimensional array and "slice" one dimension to plot in 3D
Hi all, Is there a way to import (any format) a 4D array in paraview, then to slice one of the dimensions (i.e. use only one 3D hyperplane), and plot the remaining 3D array with paraview's volume rendering? I know I could manipulate the data to make it 3D before using it in Paraview, but I was looking for a way to do this directly. Cheers Fred ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] Superbuild repo change?
> I did a fresh pull of the ParaView superbuild repository, and now I can’t do > a clean build of PV 5.2.0 on my Mac (OSX 10.9.5). > > First, I had to remove the entries for “qt” and “scipy“ in the CMakeLists.txt: .. > After removing those entries, the cmake completes and the build starts and > passes out in qt4. > I’m not sure why it’s complaining about OS X 10.7 or later?) For recent OS X qt4 is known to not compile. Use qt5 and it works (macOS 10.12) Fabian ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] paraview compilation issue
Your PYTHON_LIBRARY is invalid. Please make sure it points to a libpython2.7.so. On Wed, Feb 15, 2017 at 2:25 PM, Bishwajit Dutta wrote: > Hi Utkarsh, > > Pls find it attached. > > Thank you so much. > > -Bishwajit > > On Wed, Feb 15, 2017 at 8:26 AM, Utkarsh Ayachit < > utkarsh.ayac...@kitware.com> wrote: > >> Can you attach your CMakeCache.txt please? >> >> Thanks >> Utkarsh >> >> On Wed, Feb 15, 2017 at 7:26 AM, Bishwajit Dutta wrote: >> >>> Hi All, >>> >>> I configured paraview to compile for CPU rendering with the below option >>> on ubuntu 14.04 and Python 2.7.6: >>> >>> cmake ../ -DBUILD_TESTING=OFF -DCMAKE_BUILD_TYPE=Release >>> -DPARAVIEW_ENABLE_CATALYST=ON -DPARAVIEW_ENABLE_PYTHON=ON >>> -DPYTHON_LIBRARY=$PYTHON_LIBRARY -DPYTHON_INCLUDE_DIR=$PYTHON_INCLUDE_DIR >>> -DPARAVIEW_USE_MPI=ON -DMPI_HEADER_PATH=$MPI_HEADER_PATH >>> -DCMAKE_INSTALL_PREFIX=$BD_INSTALL_PATH -DPARAVIEW_BUILD_QT_GUI=OFF >>> -DVTK_USE_X=OFF -DOPENGL_INCLUDE_DIR=$BD_INSTALL_PATH/include >>> -DOPENGL_gl_LIBRARY=$BD_INSTALL_PATH/lib/libOSMesa.so >>> -DOPENGL_glu_LIBRARY=$BD_INSTALL_PATH/lib/libGLU.so >>> -DVTK_OPENGL_HAS_OSMESA=ON -DOSMESA_INCLUDE_DIR=$BD_INSTALL_PATH/include >>> -DOSMESA_LIBRARY=$BD_INSTALL_PATH/lib/libOSMesa.so >>> >>> Now I am getting the below compilation error: >>> >>> LOGs- >>> #make >>> >>> ... >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function >>> `PyVTKTemplate_Keys(_object*, _object*)': >>> PyVTKTemplate.cxx:(.text+0x1511): undefined reference to >>> `PyArg_ParseTuple' >>> PyVTKTemplate.cxx:(.text+0x1527): undefined reference to >>> `PyModule_GetDict' >>> PyVTKTemplate.cxx:(.text+0x1534): undefined reference to `PyList_New' >>> PyVTKTemplate.cxx:(.text+0x156c): undefined reference to `PyDict_Next' >>> PyVTKTemplate.cxx:(.text+0x1597): undefined reference to `PyList_Append' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function >>> `PyVTKTemplate_Size(_object*)': >>> PyVTKTemplate.cxx:(.text+0x15c5): undefined reference to >>> `PyModule_GetDict' >>> PyVTKTemplate.cxx:(.text+0x160c): undefined reference to `PyDict_Next' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function >>> `PyVTKTemplate_New': >>> PyVTKTemplate.cxx:(.text+0x1679): undefined reference to `PyType_Ready' >>> PyVTKTemplate.cxx:(.text+0x1691): undefined reference to `PyTuple_New' >>> PyVTKTemplate.cxx:(.text+0x169c): undefined reference to >>> `PyString_FromString' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function >>> `PyVTKTemplate_AddItem': >>> PyVTKTemplate.cxx:(.text+0x172c): undefined reference to >>> `PyModule_GetDict' >>> PyVTKTemplate.cxx:(.text+0x173a): undefined reference to >>> `PyDict_SetItemString' >>> PyVTKTemplate.cxx:(.text+0x174a): undefined reference to >>> `PyExc_TypeError' >>> PyVTKTemplate.cxx:(.text+0x1759): undefined reference to >>> `PyErr_SetString' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function >>> `PyVTKTemplate_Repr(_object*)': >>> PyVTKTemplate.cxx:(.text+0x4a): undefined reference to >>> `PyString_FromFormat' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x8): >>> undefined reference to `PyType_Type' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x90): >>> undefined reference to `PyObject_GenericGetAttr' >>> CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x100): >>> undefined reference to `PyModule_Type' >>> CMakeFiles/vtkWrappingPythonCore.dir/vtkSmartPyObject.cxx.o: In >>> function `vtkSmartPyObject::~vtkSmartPyObject()': >>> vtkSmartPyObject.cxx:(.text+0x35): undefined reference to >>> `Py_IsInitialized' >>> collect2: error: ld returned 1 exit status >>> make[2]: *** [lib/libvtkWrappingPython27Core-pv5.0.so.1] Error 1 >>> make[1]: *** [VTK/Wrapping/PythonCore/CMake >>> Files/vtkWrappingPythonCore.dir/all] Error 2 >>> make: *** [all] Error 2 >>> >>> >>> -- >>> >>> I have set the python lib and include paths. And also took care to do >>> "apt-get install python-dev". >>> >>> Thank you in advance for help as I am new and running out of ideas. >>> >>> Also do the configuration options look ok for CPU based rendering? >>> >>> BR, >>> Bishwajit >>> >>> >>> ___ >>> Powered by www.kitware.com >>> >>> Visit other Kitware open-source projects at >>> http://www.kitware.com/opensource/opensource.html >>> >>> Please keep messages on-topic and check the ParaView Wiki at: >>> http://paraview.org/Wiki/ParaView >>> >>> Search the list archives at: http://markmail.org/search/?q=ParaView >>> >>> Follow this link to subscribe/unsubscribe: >>> http://public.kitware.com/mailman/listinfo/paraview >>> >>> >> > ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://ww
Re: [Paraview] [Non-DoD Source] Re: Superbuild repo change?
Duh. “git submodule update” seems to fix things related to the qt and scipy issue. My Mac has Xcode version 6.2 Rick Angelini USArmy Research Laboratory CISD/HPC Architectures Team Phone: 410-278-6266 -Original Message- From: Ben Boeckel Reply-To: "ben.boec...@kitware.com" Date: Wednesday, February 15, 2017 at 11:34 AM To: Rick Angelini Cc: ParaView Subject: [Non-DoD Source] Re: [Paraview] Superbuild repo change? On Wed, Feb 15, 2017 at 13:50:13 +, Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US) wrote: > I did a fresh pull of the ParaView superbuild repository, and now I >can’t do > a clean build of PV 5.2.0 on my Mac (OSX 10.9.5). > > First, I had to remove the entries for “qt” and “scipy" in the > CMakeLists.txt: You need to run `git submodule update` to update the common-superbuild bits. > After removing those entries, the cmake completes and the build starts >and > passes out in qt4. > I’m not sure why it’s complaining about OS X 10.7 or later?) What version of Xcode are you using? --Ben smime.p7s Description: S/MIME cryptographic signature ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] Superbuild repo change?
On Wed, Feb 15, 2017 at 13:50:13 +, Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US) wrote: > I did a fresh pull of the ParaView superbuild repository, and now I can’t do > a clean build of PV 5.2.0 on my Mac (OSX 10.9.5). > > First, I had to remove the entries for “qt” and “scipy" in the > CMakeLists.txt: You need to run `git submodule update` to update the common-superbuild bits. > After removing those entries, the cmake completes and the build starts and > passes out in qt4. > I’m not sure why it’s complaining about OS X 10.7 or later?) What version of Xcode are you using? --Ben ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] volume vs volume
As a side note, the Mesh Quality filter does not work on all 3D cell types. I think prisms and pyramids are not supported. On Wed, Feb 15, 2017 at 9:07 AM, Dennis Conklin wrote: > Oops – meant Mesh Quality filter > > > > *From:* Dennis Conklin > *Sent:* Wednesday, February 15, 2017 7:56 AM > *To:* Paraview (paraview@paraview.org) > *Subject:* Re: [Paraview] volume vs volume > > > > Alan, > > > > A quick and dirty way to get individual element volumes is to use the mesh > refinement filter and set the Quality measure to volume. Then the > “Quality” variable in the elements is actually volume. > > > > Dennis > > ___ > Powered by www.kitware.com > > Visit other Kitware open-source projects at http://www.kitware.com/ > opensource/opensource.html > > Please keep messages on-topic and check the ParaView Wiki at: > http://paraview.org/Wiki/ParaView > > Search the list archives at: http://markmail.org/search/?q=ParaView > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/paraview > > ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] One render view on Paraview Catalyst
Hi, In the ParaView GUI you can set the Remote Render Threshold (under Edit->Settings...->Render View) to a very large number to ensure that all rendered data gets delivered to the client for rendering. In general this is a bad way to do things though since that can use a lot of bandwidth and memory. If you are trying to just have a single render view in Catalyst with a parallel run, I don't think it's possible to get just a single window. You either need to have a window for each MPI process or no windows at all. For no windows at all you will need to use either OSMesa or EGL for offscreen rendering. --Andy On Wed, Feb 15, 2017 at 3:49 AM, Lukáš Kresta wrote: > I generated python script for Catalyst from Paraview. When I run my code > with MPI, I get render window for every MPI process. But i want to have > only one window for all MPI processes. > > I already tried have script for view only on root and on another only > script for live visualization (without view), but I still get view for > every MPI process. > > Have someone some idea how to "fix" my problem? > > ___ > Powered by www.kitware.com > > Visit other Kitware open-source projects at http://www.kitware.com/ > opensource/opensource.html > > Please keep messages on-topic and check the ParaView Wiki at: > http://paraview.org/Wiki/ParaView > > Search the list archives at: http://markmail.org/search/?q=ParaView > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/paraview > > ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
[Paraview] Examples of Field Variables Manipulation for Exodus Multi-block datasets
All, I can't find a good example of manipulating Field Variables (Global Variables) in Exodus Multi-block datasets. For instance, I wrote a filter to calculate the total_volume of a mesh. Currently I print this out to the screen. I would like to add a Field variable of Total_volume but I have no idea how to do this. Does anyone have an example of how to access (read) field variables and/or how to add one. Thanks for any hints Dennis ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] volume vs volume
Oops - meant Mesh Quality filter From: Dennis Conklin Sent: Wednesday, February 15, 2017 7:56 AM To: Paraview (paraview@paraview.org) Subject: Re: [Paraview] volume vs volume Alan, A quick and dirty way to get individual element volumes is to use the mesh refinement filter and set the Quality measure to volume. Then the "Quality" variable in the elements is actually volume. Dennis ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
[Paraview] Superbuild repo change?
I did a fresh pull of the ParaView superbuild repository, and now I can’t do a clean build of PV 5.2.0 on my Mac (OSX 10.9.5). First, I had to remove the entries for “qt” and “scipy" in the CMakeLists.txt: -- Determined source version for paraview: 5.2.0 CMake Error at superbuild/CMakeLists.txt:112 (include): include could not find load file: qt CMake Error at superbuild/CMakeLists.txt:112 (include): include could not find load file: scipy After removing those entries, the cmake completes and the build starts and passes out in qt4. I’m not sure why it’s complaining about OS X 10.7 or later?) [ 19%] Built target boost [ 24%] Built target visitbridge [ 27%] Built target libxml2 [ 29%] Performing build step for 'qt4' clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) make[4]: *** [.obj/release-static/qsimplecodec.o] Error 1 make[4]: *** Waiting for unfinished jobs make[4]: *** [.obj/release-static/qlatincodec.o] Error 1 make[4]: *** [.obj/release-static/qisciicodec.o] Error 1 clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) make[4]: *** [.obj/release-static/qtextcodec.o] Error 1 clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) make[4]: *** [.obj/release-static/qtsciicodec.o] Error 1 clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) make[4]: *** [.obj/release-static/qutfcodec.o] Error 1 clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) clang: error: invalid deployment target for -stdlib=libc++ (requires OS X 10.7 or later) make[4]: *** [.obj/release-static/qmalloc.o] Error 1 make[4]: *** [.obj/release-static/qglobal.o] Error 1 make[3]: *** [sub-tools-bootstrap-make_default-ordered] Error 2 CMake Error at /Users/angel/PV/Build/superbuild/sb-qt4-build.cmake:43 (message): Failed with exit code 2 make[2]: *** [superbuild/qt4/stamp/qt4-build] Error 1 make[1]: *** [superbuild/CMakeFiles/qt4.dir/all] Error 2 make: *** [all] Error 2 Rick Angelini USArmy Research Laboratory CISD/HPC Architectures Team Phone: 410-278-6266 smime.p7s Description: S/MIME cryptographic signature ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] paraview compilation issue
Can you attach your CMakeCache.txt please? Thanks Utkarsh On Wed, Feb 15, 2017 at 7:26 AM, Bishwajit Dutta wrote: > Hi All, > > I configured paraview to compile for CPU rendering with the below option > on ubuntu 14.04 and Python 2.7.6: > > cmake ../ -DBUILD_TESTING=OFF -DCMAKE_BUILD_TYPE=Release > -DPARAVIEW_ENABLE_CATALYST=ON -DPARAVIEW_ENABLE_PYTHON=ON > -DPYTHON_LIBRARY=$PYTHON_LIBRARY -DPYTHON_INCLUDE_DIR=$PYTHON_INCLUDE_DIR > -DPARAVIEW_USE_MPI=ON -DMPI_HEADER_PATH=$MPI_HEADER_PATH > -DCMAKE_INSTALL_PREFIX=$BD_INSTALL_PATH -DPARAVIEW_BUILD_QT_GUI=OFF > -DVTK_USE_X=OFF -DOPENGL_INCLUDE_DIR=$BD_INSTALL_PATH/include > -DOPENGL_gl_LIBRARY=$BD_INSTALL_PATH/lib/libOSMesa.so > -DOPENGL_glu_LIBRARY=$BD_INSTALL_PATH/lib/libGLU.so > -DVTK_OPENGL_HAS_OSMESA=ON -DOSMESA_INCLUDE_DIR=$BD_INSTALL_PATH/include > -DOSMESA_LIBRARY=$BD_INSTALL_PATH/lib/libOSMesa.so > > Now I am getting the below compilation error: > > LOGs- > #make > > ... > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function > `PyVTKTemplate_Keys(_object*, _object*)': > PyVTKTemplate.cxx:(.text+0x1511): undefined reference to > `PyArg_ParseTuple' > PyVTKTemplate.cxx:(.text+0x1527): undefined reference to > `PyModule_GetDict' > PyVTKTemplate.cxx:(.text+0x1534): undefined reference to `PyList_New' > PyVTKTemplate.cxx:(.text+0x156c): undefined reference to `PyDict_Next' > PyVTKTemplate.cxx:(.text+0x1597): undefined reference to `PyList_Append' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function > `PyVTKTemplate_Size(_object*)': > PyVTKTemplate.cxx:(.text+0x15c5): undefined reference to > `PyModule_GetDict' > PyVTKTemplate.cxx:(.text+0x160c): undefined reference to `PyDict_Next' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function > `PyVTKTemplate_New': > PyVTKTemplate.cxx:(.text+0x1679): undefined reference to `PyType_Ready' > PyVTKTemplate.cxx:(.text+0x1691): undefined reference to `PyTuple_New' > PyVTKTemplate.cxx:(.text+0x169c): undefined reference to > `PyString_FromString' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function > `PyVTKTemplate_AddItem': > PyVTKTemplate.cxx:(.text+0x172c): undefined reference to > `PyModule_GetDict' > PyVTKTemplate.cxx:(.text+0x173a): undefined reference to > `PyDict_SetItemString' > PyVTKTemplate.cxx:(.text+0x174a): undefined reference to `PyExc_TypeError' > PyVTKTemplate.cxx:(.text+0x1759): undefined reference to `PyErr_SetString' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function > `PyVTKTemplate_Repr(_object*)': > PyVTKTemplate.cxx:(.text+0x4a): undefined reference to > `PyString_FromFormat' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x8): > undefined reference to `PyType_Type' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x90): > undefined reference to `PyObject_GenericGetAttr' > CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x100): > undefined reference to `PyModule_Type' > CMakeFiles/vtkWrappingPythonCore.dir/vtkSmartPyObject.cxx.o: In function > `vtkSmartPyObject::~vtkSmartPyObject()': > vtkSmartPyObject.cxx:(.text+0x35): undefined reference to > `Py_IsInitialized' > collect2: error: ld returned 1 exit status > make[2]: *** [lib/libvtkWrappingPython27Core-pv5.0.so.1] Error 1 > make[1]: *** > [VTK/Wrapping/PythonCore/CMakeFiles/vtkWrappingPythonCore.dir/all] > Error 2 > make: *** [all] Error 2 > > -- > > I have set the python lib and include paths. And also took care to do > "apt-get install python-dev". > > Thank you in advance for help as I am new and running out of ideas. > > Also do the configuration options look ok for CPU based rendering? > > BR, > Bishwajit > > > ___ > Powered by www.kitware.com > > Visit other Kitware open-source projects at http://www.kitware.com/ > opensource/opensource.html > > Please keep messages on-topic and check the ParaView Wiki at: > http://paraview.org/Wiki/ParaView > > Search the list archives at: http://markmail.org/search/?q=ParaView > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/paraview > > ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
Re: [Paraview] volume vs volume
Alan, A quick and dirty way to get individual element volumes is to use the mesh refinement filter and set the Quality measure to volume. Then the "Quality" variable in the elements is actually volume. Dennis ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
[Paraview] paraview compilation issue
Hi All, I configured paraview to compile for CPU rendering with the below option on ubuntu 14.04 and Python 2.7.6: cmake ../ -DBUILD_TESTING=OFF -DCMAKE_BUILD_TYPE=Release -DPARAVIEW_ENABLE_CATALYST=ON -DPARAVIEW_ENABLE_PYTHON=ON -DPYTHON_LIBRARY=$PYTHON_LIBRARY -DPYTHON_INCLUDE_DIR=$PYTHON_INCLUDE_DIR -DPARAVIEW_USE_MPI=ON -DMPI_HEADER_PATH=$MPI_HEADER_PATH -DCMAKE_INSTALL_PREFIX=$BD_INSTALL_PATH -DPARAVIEW_BUILD_QT_GUI=OFF -DVTK_USE_X=OFF -DOPENGL_INCLUDE_DIR=$BD_INSTALL_PATH/include -DOPENGL_gl_LIBRARY=$BD_INSTALL_PATH/lib/libOSMesa.so -DOPENGL_glu_LIBRARY=$BD_INSTALL_PATH/lib/libGLU.so -DVTK_OPENGL_HAS_OSMESA=ON -DOSMESA_INCLUDE_DIR=$BD_INSTALL_PATH/include -DOSMESA_LIBRARY=$BD_INSTALL_PATH/lib/libOSMesa.so Now I am getting the below compilation error: LOGs- #make ... CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function `PyVTKTemplate_Keys(_object*, _object*)': PyVTKTemplate.cxx:(.text+0x1511): undefined reference to `PyArg_ParseTuple' PyVTKTemplate.cxx:(.text+0x1527): undefined reference to `PyModule_GetDict' PyVTKTemplate.cxx:(.text+0x1534): undefined reference to `PyList_New' PyVTKTemplate.cxx:(.text+0x156c): undefined reference to `PyDict_Next' PyVTKTemplate.cxx:(.text+0x1597): undefined reference to `PyList_Append' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function `PyVTKTemplate_Size(_object*)': PyVTKTemplate.cxx:(.text+0x15c5): undefined reference to `PyModule_GetDict' PyVTKTemplate.cxx:(.text+0x160c): undefined reference to `PyDict_Next' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function `PyVTKTemplate_New': PyVTKTemplate.cxx:(.text+0x1679): undefined reference to `PyType_Ready' PyVTKTemplate.cxx:(.text+0x1691): undefined reference to `PyTuple_New' PyVTKTemplate.cxx:(.text+0x169c): undefined reference to `PyString_FromString' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function `PyVTKTemplate_AddItem': PyVTKTemplate.cxx:(.text+0x172c): undefined reference to `PyModule_GetDict' PyVTKTemplate.cxx:(.text+0x173a): undefined reference to `PyDict_SetItemString' PyVTKTemplate.cxx:(.text+0x174a): undefined reference to `PyExc_TypeError' PyVTKTemplate.cxx:(.text+0x1759): undefined reference to `PyErr_SetString' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o: In function `PyVTKTemplate_Repr(_object*)': PyVTKTemplate.cxx:(.text+0x4a): undefined reference to `PyString_FromFormat' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x8): undefined reference to `PyType_Type' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x90): undefined reference to `PyObject_GenericGetAttr' CMakeFiles/vtkWrappingPythonCore.dir/PyVTKTemplate.cxx.o:(.data.rel+0x100): undefined reference to `PyModule_Type' CMakeFiles/vtkWrappingPythonCore.dir/vtkSmartPyObject.cxx.o: In function `vtkSmartPyObject::~vtkSmartPyObject()': vtkSmartPyObject.cxx:(.text+0x35): undefined reference to `Py_IsInitialized' collect2: error: ld returned 1 exit status make[2]: *** [lib/libvtkWrappingPython27Core-pv5.0.so.1] Error 1 make[1]: *** [VTK/Wrapping/PythonCore/CMakeFiles/vtkWrappingPythonCore.dir/all] Error 2 make: *** [all] Error 2 -- I have set the python lib and include paths. And also took care to do "apt-get install python-dev". Thank you in advance for help as I am new and running out of ideas. Also do the configuration options look ok for CPU based rendering? BR, Bishwajit ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
[Paraview] Problem testing PV 5.3.0 RC1
Hello,
I am testing ParaView-5.3.0-RC1-Qt5-OpenGL2-Windows-64bit.
I run into a problem when using PV with a script. When I launch a simple
script with the command
D:\ParaView-5.3.0-RC1-Qt5-OpenGL2-Windows-64bit\bin\paraview.exe
--script=testSphere.py
I have the following error message in the console, and nothing happens
Cannot open data file " \paraview.exe " (:0, )
Below is testSphere.py
from paraview.simple import *
paraview.simple._DisableFirstRenderCameraReset()
sphere1 = Sphere()
renderView1 = GetActiveViewOrCreate('RenderView')
sphere1Display = Show(sphere1, renderView1)
renderView1.ResetCamera()
My initial goal was to check that the following code works with PV5.3.
For version PV 5.2 it failed, whereas previously it succeeded
import os
import tempfile
import numpy as np
outputFilename = os.path.join(tempfile.mkdtemp(), 'dummy.npz')
varName='Time'
np.savez(outputFilename, **{varName:np.random.rand(3,4)})
d = np.load(outputFilename)
time = d[varName]
d.close()
os.remove(outputFilename)
print('Success PV can create a NPZ file and read its content : ' +
outputFilename)
I had reported this bug,
http://public.kitware.com/pipermail/paraview/2017-January/038890.html
and a bug issue had been opened:
https://gitlab.kitware.com/paraview/paraview-superbuild/issues/43
Guillaume Jacquenot
___
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[Paraview] One render view on Paraview Catalyst
I generated python script for Catalyst from Paraview. When I run my code with MPI, I get render window for every MPI process. But i want to have only one window for all MPI processes. I already tried have script for view only on root and on another only script for live visualization (without view), but I still get view for every MPI process. Have someone some idea how to "fix" my problem? ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/paraview
