Re: [petsc-dev] Cannot locate file: share/petsc/datafiles/matrices/small

2021-09-13 Thread Stefano Zampini 
I'll see if I can reproduce

Il Mar 14 Set 2021, 06:58 Junchao Zhang  ha
scritto:

> Hi, Stefano,
>Ping you again to see if you want to resolve this problem before
> petsc-3.16
>
> --Junchao Zhang
>
>
> On Sun, Sep 12, 2021 at 3:06 PM Antonio T. sagitter <
> sagit...@fedoraproject.org> wrote:
>
>> Unfortunately, it's not possible. I must use the OpenMPI provided by
>> Fedora build-system (these rpm builds of PETSc are for Fedora's
>> repositories), downloading external software is not permitted.
>>
>> On 9/12/21 21:10, Pierre Jolivet wrote:
>> >
>> >> On 12 Sep 2021, at 8:56 PM, Matthew Knepley > >> > wrote:
>> >>
>> >> On Sun, Sep 12, 2021 at 2:49 PM Antonio T. sagitter
>> >> mailto:sagit...@fedoraproject.org>>
>> wrote:
>> >>
>> >> Those attached are configure.log/make.log from a MPI build in
>> >> Fedora 34
>> >> x86_64 where the error below occurred.
>> >>
>> >>
>> >> This is OpenMPI 4.1.0. Is that the only MPI you build? My first
>> >> inclination is that this is an MPI implementation bug.
>> >>
>> >> Junchao, do we have an OpenMPI build in the CI?
>> >
>> > config/examples/arch-ci-linux-cuda-double-64idx.py:
>> >   '--download-openmpi=1',
>> > config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py:
>> >   '--download-openmpi=1',
>> > config/examples/arch-ci-linux-pkgs-opt.py:  '--download-openmpi=1',
>> >
>> > config/BuildSystem/config/packages/OpenMPI.py uses version 4.1.0 as
>> well.
>> > I’m not sure PETSc is to blame here Antonio. You may want to try to
>> > ditch the OpenMPI shipped by your packet manager and try
>> > --download-openmpi as well, just for a quick sanity check.
>> >
>> > Thanks,
>> > Pierre
>> >
>>
>> --
>> ---
>> Antonio Trande
>> Fedora Project
>> mailto: sagit...@fedoraproject.org
>> GPG key: 0x29FBC85D7A51CC2F
>> GPG key server: https://keyserver1.pgp.com/
>>
>

Re: [petsc-dev] Cannot locate file: share/petsc/datafiles/matrices/small

2021-09-13 Thread Junchao Zhang 
Hi, Stefano,
   Ping you again to see if you want to resolve this problem before
petsc-3.16

--Junchao Zhang


On Sun, Sep 12, 2021 at 3:06 PM Antonio T. sagitter <
sagit...@fedoraproject.org> wrote:

> Unfortunately, it's not possible. I must use the OpenMPI provided by
> Fedora build-system (these rpm builds of PETSc are for Fedora's
> repositories), downloading external software is not permitted.
>
> On 9/12/21 21:10, Pierre Jolivet wrote:
> >
> >> On 12 Sep 2021, at 8:56 PM, Matthew Knepley  >> > wrote:
> >>
> >> On Sun, Sep 12, 2021 at 2:49 PM Antonio T. sagitter
> >> mailto:sagit...@fedoraproject.org>> wrote:
> >>
> >> Those attached are configure.log/make.log from a MPI build in
> >> Fedora 34
> >> x86_64 where the error below occurred.
> >>
> >>
> >> This is OpenMPI 4.1.0. Is that the only MPI you build? My first
> >> inclination is that this is an MPI implementation bug.
> >>
> >> Junchao, do we have an OpenMPI build in the CI?
> >
> > config/examples/arch-ci-linux-cuda-double-64idx.py:
> >   '--download-openmpi=1',
> > config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py:
> >   '--download-openmpi=1',
> > config/examples/arch-ci-linux-pkgs-opt.py:  '--download-openmpi=1',
> >
> > config/BuildSystem/config/packages/OpenMPI.py uses version 4.1.0 as well.
> > I’m not sure PETSc is to blame here Antonio. You may want to try to
> > ditch the OpenMPI shipped by your packet manager and try
> > --download-openmpi as well, just for a quick sanity check.
> >
> > Thanks,
> > Pierre
> >
>
> --
> ---
> Antonio Trande
> Fedora Project
> mailto: sagit...@fedoraproject.org
> GPG key: 0x29FBC85D7A51CC2F
> GPG key server: https://keyserver1.pgp.com/
>

Re: [petsc-dev] I have started a new position

2021-09-13 Thread Zhang, Hong via petsc-dev 
https://www.simonsfoundation.org/people/barry-smith/
[https://simonsfoundation.imgix.net/wp-content/uploads/2021/09/08170010/Barry-Smith.jpg?auto=format=90]
Barry Smith
Barry Smith on Simons Foundation
www.simonsfoundation.org


From: Barry Smith 
Sent: Monday, September 13, 2021 11:35 AM
To: Zhang, Hong 
Cc: For users of the development version of PETSc 
Subject: Re: [petsc-dev] I have started a new position


  The center for computational mathematics, I won't understand a thing in the 
other centers.

  Barry


On Sep 13, 2021, at 11:15 AM, Zhang, Hong 
mailto:hzh...@mcs.anl.gov>> wrote:

Barry,
https://en.wikipedia.org/wiki/Flatiron_Institute
Flatiron Institute - Wikipedia
The Flatiron Institute is an internal research division of the Simons 
Foundation, launched in 2016. It comprises five centers for computational 
science: the Center for Computational Astrophysics (CCA); the Center for 
Computational Biology (CCB); the Center for Computational Quantum Physics 
(CCQ); the Center for Computational Mathematics (CCM); and the Center for 
Computational Neuroscience (CCN).
en.wikipedia.org
Which center you'll be working with?
Hong

From: petsc-dev 
mailto:petsc-dev-boun...@mcs.anl.gov>> on behalf 
of Barry Smith mailto:bsm...@petsc.dev>>
Sent: Monday, September 13, 2021 9:24 AM
To: For users of the development version of PETSc 
mailto:petsc-dev@mcs.anl.gov>>
Subject: [petsc-dev] I have started a new position


I have started a new research position at the Flatiron Institute and stopped my 
Argonne Associate position. The new position will allow me to continue to work 
on PETSc as well as work with new groups of people.

  Barry

Re: [petsc-dev] I have started a new position

2021-09-13 Thread Barry Smith 

  The center for computational mathematics, I won't understand a thing in the 
other centers.

  Barry


> On Sep 13, 2021, at 11:15 AM, Zhang, Hong  wrote:
> 
> Barry,
> https://en.wikipedia.org/wiki/Flatiron_Institute 
> 
> Flatiron Institute - Wikipedia 
> 
> The Flatiron Institute is an internal research division of the Simons 
> Foundation, launched in 2016. It comprises five centers for computational 
> science: the Center for Computational Astrophysics (CCA); the Center for 
> Computational Biology (CCB); the Center for Computational Quantum Physics 
> (CCQ); the Center for Computational Mathematics (CCM); and the Center for 
> Computational Neuroscience (CCN).
> en.wikipedia.org 
> Which center you'll be working with? 
> Hong
> From: petsc-dev  > on behalf of Barry Smith 
> mailto:bsm...@petsc.dev>>
> Sent: Monday, September 13, 2021 9:24 AM
> To: For users of the development version of PETSc  >
> Subject: [petsc-dev] I have started a new position
>  
> 
> I have started a new research position at the Flatiron Institute and stopped 
> my Argonne Associate position. The new position will allow me to continue to 
> work on PETSc as well as work with new groups of people. 
> 
>   Barry

Re: [petsc-dev] I have started a new position

2021-09-13 Thread Matthew Knepley 
You can see Barry in the NA group.

   Matt

On Mon, Sep 13, 2021 at 11:15 AM Zhang, Hong via petsc-dev <
petsc-dev@mcs.anl.gov> wrote:

> Barry,
> https://en.wikipedia.org/wiki/Flatiron_Institute
> Flatiron Institute - Wikipedia
> 
> The Flatiron Institute is an internal research division of the Simons
> Foundation, launched in 2016. It comprises five centers for computational
> science: the Center for Computational Astrophysics (CCA); the Center for
> Computational Biology (CCB); the Center for Computational Quantum Physics
> (CCQ); the Center for Computational Mathematics (CCM); and the Center for
> Computational Neuroscience (CCN).
> en.wikipedia.org
> Which center you'll be working with?
> Hong
> --
> *From:* petsc-dev  on behalf of Barry
> Smith 
> *Sent:* Monday, September 13, 2021 9:24 AM
> *To:* For users of the development version of PETSc  >
> *Subject:* [petsc-dev] I have started a new position
>
>
> I have started a new research position at the Flatiron Institute and
> stopped my Argonne Associate position. The new position will allow me to
> continue to work on PETSc as well as work with new groups of people.
>
>   Barry
>
>

-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener

https://www.cse.buffalo.edu/~knepley/

Re: [petsc-dev] I have started a new position

2021-09-13 Thread Zhang, Hong via petsc-dev 
Barry,
https://en.wikipedia.org/wiki/Flatiron_Institute
Flatiron Institute - Wikipedia
The Flatiron Institute is an internal research division of the Simons 
Foundation, launched in 2016. It comprises five centers for computational 
science: the Center for Computational Astrophysics (CCA); the Center for 
Computational Biology (CCB); the Center for Computational Quantum Physics 
(CCQ); the Center for Computational Mathematics (CCM); and the Center for 
Computational Neuroscience (CCN).
en.wikipedia.org
Which center you'll be working with?
Hong

From: petsc-dev  on behalf of Barry Smith 

Sent: Monday, September 13, 2021 9:24 AM
To: For users of the development version of PETSc 
Subject: [petsc-dev] I have started a new position


I have started a new research position at the Flatiron Institute and stopped my 
Argonne Associate position. The new position will allow me to continue to work 
on PETSc as well as work with new groups of people.

  Barry

[petsc-dev] I have started a new position

2021-09-13 Thread Barry Smith 


I have started a new research position at the Flatiron Institute and stopped my 
Argonne Associate position. The new position will allow me to continue to work 
on PETSc as well as work with new groups of people. 

  Barry