Re: [PERFORM] PostgreSQL disk fragmentation causes performance problems on Windows

2015-04-29 Thread Andres Freund
On 2015-04-29 10:06:39 +0200, Andres Freund wrote:
 Hi,
 
 On 2015-04-23 19:47:06 +, Jan Gunnar Dyrset wrote:
  I am using PostgreSQL to log data in my application. A number of rows
  are added periodically, but there are no updates or deletes. There are
  several applications that log to different databases.
  
  This causes terrible disk fragmentation which again causes performance
  degradation when retrieving data from the databases. The table files
  are getting more than 5 fragments over time (max table size about
  1 GB).
  
  The problem seems to be that PostgreSQL grows the database with only
  the room it need for the new data each time it is added. Because
  several applications are adding data to different databases, the
  additions are never contiguous.
 
 Which OS and filesystem is this done on? Because many halfway modern
 systems, like e.g ext4 and xfs, implement this in the background as
 'delayed allocation'.

Oh, it's in the subject. Stupid me, sorry for that. I'd consider testing
how much better this behaves under a different operating system, as a
shorter term relief.

Greetings,

Andres Freund


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Re: [PERFORM] PostgreSQL disk fragmentation causes performance problems on Windows

2015-04-29 Thread Andres Freund
Hi,

On 2015-04-23 19:47:06 +, Jan Gunnar Dyrset wrote:
 I am using PostgreSQL to log data in my application. A number of rows
 are added periodically, but there are no updates or deletes. There are
 several applications that log to different databases.
 
 This causes terrible disk fragmentation which again causes performance
 degradation when retrieving data from the databases. The table files
 are getting more than 5 fragments over time (max table size about
 1 GB).
 
 The problem seems to be that PostgreSQL grows the database with only
 the room it need for the new data each time it is added. Because
 several applications are adding data to different databases, the
 additions are never contiguous.

Which OS and filesystem is this done on? Because many halfway modern
systems, like e.g ext4 and xfs, implement this in the background as
'delayed allocation'.

Is it possible that e.g. you're checkpointing very frequently - which
includes fsyncing dirty files - and that that causes delayed allocation
not to work? How often did you checkpoint?

How did you measure the fragmentation? Using filefrag? If so, could you
perhaps send its output?

 I think that preallocating lumps of a given, configurable size, say 4
 MB, for the tables would remove this problem. The max number of
 fragments on a 1 GB file would then be 250, which is no problem. Is
 this possible to configure in PostgreSQL? If not, how difficult is it
 to implement in the database?

It's not impossible, but there are complexities because a) extension
happens under a sometimes contended lock, and doing more there will have
possible negative scalability implications. we need to restructure the
logging first to make that more realistic. b) postgres also tries to
truncate files, and we need to make sure that happens only in the right
cirumstances.

Greetings,

Andres Freund


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Re: [PERFORM] PostgreSQL disk fragmentation causes performance problems on Windows

2015-04-29 Thread Joshua D. Drake


On 04/29/2015 01:08 AM, Andres Freund wrote:


Which OS and filesystem is this done on? Because many halfway modern
systems, like e.g ext4 and xfs, implement this in the background as
'delayed allocation'.


Oh, it's in the subject. Stupid me, sorry for that. I'd consider testing
how much better this behaves under a different operating system, as a
shorter term relief.


This is a known issue on the Windows platform. It is part of the 
limitations of that environment. Linux/Solaris/FreeBSD do not suffer 
from this issue in nearly the same manner.


jD




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Re: [PERFORM] PostgreSQL disk fragmentation causes performance problems on Windows

2015-04-29 Thread k...@rice.edu
On Wed, Apr 29, 2015 at 07:07:04AM -0700, Joshua D. Drake wrote:
 
 On 04/29/2015 01:08 AM, Andres Freund wrote:
 
 Which OS and filesystem is this done on? Because many halfway modern
 systems, like e.g ext4 and xfs, implement this in the background as
 'delayed allocation'.
 
 Oh, it's in the subject. Stupid me, sorry for that. I'd consider testing
 how much better this behaves under a different operating system, as a
 shorter term relief.
 
 This is a known issue on the Windows platform. It is part of the
 limitations of that environment. Linux/Solaris/FreeBSD do not suffer
 from this issue in nearly the same manner.
 
 jD
 

You might consider a CLUSTER or VACUUM FULL to re-write the table with
less fragmentation.

Regards,
Ken


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Re: [PERFORM] PostgreSQL disk fragmentation causes performance problems on Windows

2015-04-29 Thread Andrew Dunstan


On 04/29/2015 10:35 AM, k...@rice.edu wrote:

On Wed, Apr 29, 2015 at 07:07:04AM -0700, Joshua D. Drake wrote:

On 04/29/2015 01:08 AM, Andres Freund wrote:


Which OS and filesystem is this done on? Because many halfway modern
systems, like e.g ext4 and xfs, implement this in the background as
'delayed allocation'.

Oh, it's in the subject. Stupid me, sorry for that. I'd consider testing
how much better this behaves under a different operating system, as a
shorter term relief.

This is a known issue on the Windows platform. It is part of the
limitations of that environment. Linux/Solaris/FreeBSD do not suffer
from this issue in nearly the same manner.

jD


You might consider a CLUSTER or VACUUM FULL to re-write the table with
less fragmentation.



Or pg_repack if you can't handle the lockup time that these involve.

cheers

andrew


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