ID:               47582
 Updated by:       j...@php.net
 Reported By:      liangc dot mu at gmail dot com
-Status:           Open
+Status:           Bogus
 Bug Type:         *General Issues
 Operating System: RedHat Enterprise 5.2
 PHP Version:      5.2.9
 New Comment:

Sorry, but your problem does not imply a bug in PHP itself.  For a
list of more appropriate places to ask for help using PHP, please
visit http://www.php.net/support.php as this bug system is not the
appropriate forum for asking support questions.  Due to the volume
of reports we can not explain in detail here why your report is not
a bug.  The support channels will be able to provide an explanation
for you.

Thank you for your interest in PHP.




Previous Comments:
------------------------------------------------------------------------

[2009-03-05 22:34:40] liangc dot mu at gmail dot com

Description:
------------
Basically, my test.php contains:

<?php

#$cmd="/usr/local/genome/gmap/gmap-2009-02-04/bin/gmap -v";
$cmd="/usr/local/genome/gmap/gmap-2009-02-04/bin/gmap -d 
oryza_sativa_rap_4 -n 1000 -k 2000 -A -B 2 sample_chlamy.fasta.valid 
>out";
system($cmd,$exeReturn);
#exec($cmd);

echo $cmd."<br/>";
echo $exeReturn."<br/>";

?>

(1) In command line, when I type "php test.php", I met success in 
executing the gmap program and get the out result.
(2) However, through the web server, the system command is always not 
executed.

I have another server that have the identical settings (such as the 
same httpd.conf, php.ini), the test.php code can be executed
through the Internet and the command line. 







Reproduce code:
---------------
<?php

#$cmd="/usr/local/genome/gmap/gmap-2009-02-04/bin/gmap -v";
$cmd="/usr/local/genome/gmap/gmap-2009-02-04/bin/gmap -d
oryza_sativa_rap_4 -n 1000 -k 2000 -A -B 2 sample_chlamy.fasta.valid
>out";
system($cmd,$exeReturn);
#exec($cmd);

echo $cmd."<br/>";
echo $exeReturn."<br/>";

?>



------------------------------------------------------------------------


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