[PyMOL] multi-chain pdb (+ clipping)

2002-11-29 Thread Luca Fenu
dear Pymolers,

can anyone suggest me a way to select in pymol the different chains
inside a given pdb file?
e.g: 1a07 has 4 different chain, two long ones belonging to the protein,
and two small ones belonging to the ligands.
It is possible to create an object for every one of them? 
thanks in advance

luca

ps: also: how can I set the z-plane clipping in such a way that when I
load a new molecule the previous object are kept in view? is there any
way of doing that?



Re: [PyMOL] multi-chain pdb (+ clipping)

2002-11-29 Thread Jules Jacobsen
Hi Luca,

To create new objects of chains try this:

select R= chain R

this will create an object named R from the atoms of chain R. Where chain
R is specified in the PDB file.

Sorry, i can't help with the Z-plane clipping thing.

Jules

On Fri, 29 Nov 2002, Luca Fenu wrote:

 dear Pymolers,

 can anyone suggest me a way to select in pymol the different chains
 inside a given pdb file?
 e.g: 1a07 has 4 different chain, two long ones belonging to the protein,
 and two small ones belonging to the ligands.
 It is possible to create an object for every one of them?
 thanks in advance

   luca

 ps: also: how can I set the z-plane clipping in such a way that when I
 load a new molecule the previous object are kept in view? is there any
 way of doing that?


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