[PyMOL] mouse

2004-01-16 Thread Thierry Granier 

Good morning,

I am trying to use pymol on a PC linux RedHat 9.0 using
the software summit 2.2 of Xig, and I run into the following
problem:
after loading a molecule, when I try to click on an atom, for selection, 
using

CTRL shif lb or CTRL shift lb, I get the message
"no atom found nearby"

I have tried all the mouse settings from the gui with no success.

Any help will be appreciated,
thank you

Thierry Granier.

RE: [PyMOL] mouse

2004-01-16 Thread Warren L. DeLano 
Thierry,

This behavior could be the symptom of either malfunctioning OpenGL, or a
screen with two few colors to support color-encoded picking (which is
what PyMOL uses behind the scenes).

Please confirm that your display is running in 24 or 32 bit color.  If
that is the case and picking still fails, then please try saving a png
file of what you see on the screen ("png filename.png").  If that PNG
file exhibits any distortion or artifacts, then that's the cause of the
problems.  Otherwise, PyMOL may have a bug...

Cheers,
Warren


--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154 
Fax   (650)-593-4020

> -Original Message-
> From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users-
> ad...@lists.sourceforge.net] On Behalf Of Thierry Granier
> Sent: Friday, January 16, 2004 12:52 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] mouse
> 
> Good morning,
> 
> I am trying to use pymol on a PC linux RedHat 9.0 using
> the software summit 2.2 of Xig, and I run into the following
> problem:
> after loading a molecule, when I try to click on an atom, for
selection,
> using
> CTRL shif lb or CTRL shift lb, I get the message
> "no atom found nearby"
> 
> I have tried all the mouse settings from the gui with no success.
> 
> Any help will be appreciated,
> thank you
> 
> Thierry Granier.
> 
> 
> 
> 
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[PyMOL] hardware stereo using pymol

2004-01-16 Thread Dr. S. Frank Yan 
I'm using stereographics crystaleye with e-2 emitter
and Quadro2 Pro graphics card, which does support the
emitter.  I am able to set the stereo on, and the
screen starts to flick a little; however, the emitter
is not turned on by the program and therefore no
stereo.  Stereographics claims that the emitter has to
be turned on/off by application program when the
stereo is enabled/disabled.  I was wondering if anyone
has experience with that.  Thanks a lot, Frank


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