[PyMOL] Font size with cyl_text
Hi, I'm trying to add some labels to a diagram using the cyl_text method, but I can't find any way to change the font size. In the only example I've found: # draw text using cgo from pymol import cmd from pymol.cgo import * from pymol.vfont import plain cgo = [] axes = [[2.0,0.0,0.0],[0.0,2.0,0.0],[0.0,0.0,2.0]] pos = [0.0,-3.0,0.0] cyl_text(cgo,plain,pos,'Hello Universe',0.10,axes=axes) cmd.load_cgo(cgo,'txt') cmd.zoom(all,2.0) Changing the '0.10' parameter only alters the thickness of the text, not the font size. Is there a way of altering font size here? Alex Gutteridge European Bioinformatics Institute Cambridge CB10 1SD UK Tel: 01223 492550 Email: al...@ebi.ac.uk
Re: [PyMOL] Cavity display?
On Friday 23 July 2004 13:41, Dirk Kostrewa wrote: I wanted to have a program that can easily calculate cavities in proteins to be displayed with pymol (see e-mails below for details). Thanks to Gareth and Lari I've got two pointers to such programs: I've tried PASS, recommended by Lari and got a surface picture of my cavities within literally a few minutes, as Lari already wrote. The rTools (http://www.rubor.de/bioinf/pymol_rubor.html) also contain a fucntion to interface PASS with PyMOL. -- Lieven Buts Department of Ultrastructure Vrije Universiteit Brussel
[PyMOL] color individual residues on a surface?
Hi PyMOL'ers I'm trying to figure out how to do something that looks like the following figure: http://www.uvm.edu/~mbovee/structures/surface.png It seems any individual residues I color always map onto the cartoon ribbon representation rather than onto the surface representation. Is this currently possible in PyMOL to do what is pictured in the link above? Thanks, --Michael Bovee, Ph.D. Dept. of Biochemistry University of Vermont
