[PyMOL] APBS windows version

2005-12-29 Thread kmk
Hi, all

Recently, I obtained APBS windows version and than installed. It works well.

Is it possible use in Pymol windows version? 


I found one error message 
ObjectMapLoadDXFile-Error: Unable to open file!


Sincerely yours,

Kim, Mun-kyoung

Protein Structure and Function Laboratory
Department of Life Science
Gwangju Institute of Science and Technology (GIST)
1 Oryong - Dong, Puk-Gu, Gwangju, Korea, 500-712
Tel: +82-062-970-2549
Fax: +82-062-970-2484
Lab http://xray.gist.ac.kr 







[PyMOL] Saving Images

2005-12-29 Thread Michael Morbious
Hi everyone,
Each time I try to save images, Pymol writes 640x480
pixel image to the file. I wonder if there is a way to
save images (png format) other than 640X480 pixel that
is default.
Any help will be appreciated.
Thanks.




__ 
Yahoo! for Good - Make a difference this year. 
http://brand.yahoo.com/cybergivingweek2005/



Re: [PyMOL] Saving Images

2005-12-29 Thread Peter Adrian Meyer
 Hi everyone,
 Each time I try to save images, Pymol writes 640x480
 pixel image to the file. I wonder if there is a way to
 save images (png format) other than 640X480 pixel that
 is default.
 Any help will be appreciated.
 Thanks.

Images are saved as either the size of the viewer window, or the ray
traced size.  The easiest way to get a larger image is to maximize the
viewer window, and then save.  To get an arbritray size, use the
ray-tracer (ray 1024,768 ; png BigImage.png).

Pete



Pete Meyer
Fu Lab
BMCB grad student
Cornell University




[PyMOL] Lighting models b29 vs. b31

2005-12-29 Thread Mark A Saper
I know that the lighting model for ray tracing in beta 31 is  
different than beta 29.  But ray tracing of surfaces looks  
significantly better in beta 29.   Beta 29 is brighter and the  
specular highlights are more subtle (less contrast).  Any suggestions  
how to emulate beta29 appearance in beta31?


Thanks,
Mark

_
Mark A. Saper, Ph.D.
Associate Professor of Biological Chemistry
Biophysics Research Division, University of Michigan
Chemistry Building Room 3040
930 N University Ave
Ann Arbor MI 48109-1055 U.S.A.

sa...@umich.edu(734) 764-3353fax (734) 764-3323
http://www.biochem.med.umich.edu/biochem/research/profiles/saper.html