Hi Cyril,
obviously the Numeric package is not installed.
This package is somewhat out of date and replaced by the numpy package.
You could try to replace the line
"from Numeric import *"
by
"from numpy.oldnumeric import *"
Good luck,
Daniel
On Friday 13 June 2008 12:50:08 cyril gaudin wrote:
> Dear Pymol Users,
>
>
> I am trying to use the Pynmr plugin within Pymol on a Mac OS 10.4
> intel machine either with the X11Hybrid or the fink version. But I am
> not able to make it run when I launch Pymol.
>
> What I have done is just downloaded the pynmr_0.37f_OSX.tar.gz file,
> untared it in my /modules/pmg-tk/startup directory and installed it
> entering 'install' in the new created pynmr directory.
>
> The result of that is 2 new plug_nmr.py(c) files in the /modules/pmg-
> tk/startup directory. But when starting Pymol, here are the error
> messages I have :
>
> This PyMOL Executable Build incorporates Open-Source PyMOL 0.99rc6.
> Detected 4 CPUs. Enabled multithreaded rendering.
> Exception in plugin 'pynmr' -- Traceback follows...
> Traceback (most recent call last):
>File "/Applications/PyMOLX11Hybrid.app/pymol/modules/pmg_tk/
> PMGApp.py", line 159, in initialize_plugins
> mod.__init__(self)
> TypeError: argument 1 must be string, not instance
> Error: unable to initialize plugin 'pynmr'.
> Exception in plugin 'plug_nmr' -- Traceback follows...
> Traceback (most recent call last):
>File "/Applications/PyMOLX11Hybrid.app/pymol/modules/pmg_tk/
> PMGApp.py", line 156, in initialize_plugins
> __builtin__.__import__(mod_name)
>File "/Applications/PyMOLX11Hybrid.app/pymol/modules/pmg_tk/
> startup/plug_nmr.py", line 47, in ?
> from pynmr.pynmr import *
>File "/Applications/PyMOLX11Hybrid.app/pymol/modules/pmg_tk/
> startup/pynmr/pynmr.py", line 67, in ?
> from superimp import *
>File "/Applications/PyMOLX11Hybrid.app/pymol/modules/pmg_tk/
> startup/pynmr/superimp.py", line 35, in ?
> from rmsd import *
>File "/Applications/PyMOLX11Hybrid.app/pymol/modules/pmg_tk/
> startup/pynmr/rmsd.py", line 34, in ?
> from Numeric import *
> ImportError: No module named Numeric
> Error: unable to initialize plugin 'plug_nmr'.
>
> Does anybody have ever met this problem? Or can advice me some new
> things to test as I have no more ideas to use the plugin?
>
> Thanks.
>
> Best Regards,
> Cyril Gaudin.
--
Dr. Daniel Seeliger
Computational Biomolecular Dynamics Group
Max-Planck-Institute for Biophysical Chemistry
Am Fassberg 11
37077 Goettingen, Germany
Tel: +49 551 201 2310
Fax: +49 551 201 2302
email: dsee...@gwdg.de
www.mpibpc.mpg.de/groups/de_groot/dseelig/index.html
