Re: [PyMOL] Dynoplot : Interactive plot

2011-09-20 Thread Thomas Holder
Hi,

I reworked the broken DynoPlot script.

Changes and improvements include:

  * much faster calculation of Phi/Psi angles
  * can open multiple plot windows
  * center on residue with right-mouse-click
  * different plot symbols for GLY and PRO

http://pymolwiki.org/index.php/DynoPlot

Cheers,
   Thomas

Thomas Holder wrote, On 08/16/11 15:51:
 On 08/16/2011 03:16 PM, Joseph André wrote:
 Hi everybody,

 I want to build an interactive plot I tried to use and tweak dynoplot
 but DynoPlot doesn't work properly : I can display the Tk window but
 points aren't plotted. However the dihedrals angles are computed
 correctly. There isn't any traceback or error reported on the console.

 Do you have experienced similar problems ?
 
 I can confirm that DynoPlot does not work. This needs to be fixed.
 
 Cheers,
   Thomas

-- 
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen

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[PyMOL] NUmber

2011-09-20 Thread Suda Ravindran
Hi,

I would like to know if there is any option in PyMol to count the number of
helices and sheets present in the structure.

Please help me out..

-Suda
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definitive record of customers, application performance, security
threats, fraudulent activity and more. Splunk takes this data and makes
sense of it. Business sense. IT sense. Common sense.
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