Hi Jim,
There is a beta version of Incentive PyMOL available for download from
http://pymol.org/download/1811/ (version 1.8.1.1 BETA).
Cheers,
Thomas
On 29 Mar 2016, at 23:30, James Kress wrote:
> Does that mean it is in the pay version now? If yes, how do I get it,
> through the normal download link?
>
> Jim
>
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> -Original Message-
> From: Thomas Holder [mailto:thomas.hol...@schrodinger.com]
> Sent: Sunday, March 27, 2016 4:10 PM
> To: pymol-users
> Subject: Re: [PyMOL] The Wiki appears outdated or in error
>
> Hi Jared,
>
> Thanks a lot for the patch. Applied to SVN rev 4154.
>
> Cheers,
> Thomas
>
> On 25 Mar 2016, at 20:03, Sampson, Jared M.
> wrote:
>
>> Hi Jim -
>>
>> Here's a patch for Open Source PyMOL (rev4153) that adds the
> "collada_background_box" setting (default=0). If you're using Open Source
> PyMOL and are up to applying it and rebuilding, feel free to use it.
> Otherwise, I already sent it to Thomas, so hopefully it will be incorporated
> into SVN and Incentive PyMOL soon.
>>
>> Cheers,
>> Jared
>>
>> --
>> Jared Sampson
>> Columbia University
>>
>>> On Mar 24, 2016, at 2:26 PM, Sampson, Jared M.
> wrote:
>>>
>>> Hi Jim -
>>>
When I
set geometry_export_mode, 1
in PyMOL, then save myfile.dae, then import into MeshLab, MeshLab hangs.
>>>
>>> I can confirm that this happens for me, too. I guess maybe Meshlab
> requires the camera?
>>>
>>> As a workaround, you can go back to the previous version with
> collada_geometry_mode=1 and simply delete the box. You can do this within
> Meshlab by using the "Select Connected Components in a region" tool to
> select a corner the box, then clicking the "Delete the current set of
> selected faces and all the vertices surrounded by that faces" button (see
> attached screenshot). Then, if you zoom in (the box is 100x larger than the
> largest dimension of the scene), your scene will be there.
>>>
>>> I'm working on a patch right now to exclude the bounding background box
> from default COLLADA output and make it optional via a new
> `collada_background_box` setting.
>>>
>>> Sorry for the confusion, hope this clears it up.
>>>
>>> Cheers,
>>> Jared
>>>
>>> --
>>> Jared Sampson
>>> Columbia University
>>>
>>
>>
> -
--
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.
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