Re: [PyMOL] pymol plugins Problem

[Thomas Holder]

Hi Rituraj,

To get a meaningful stack trace, import a plugin's module, e.g.:

PyMOL> import pmg_tk.startup.align_all

Not all plugins will add an entry to the "Plugin" menu, some just register new 
commands.

Hope that helps.

Cheers,
  Thomas

On 19 May 2016, at 02:28, Rituraj Purohit  wrote:

> Hello,
> 
> I am using pymol (1.6.x) in ubuntu 14.04, I install few plugins (Autodock, 
> tconcoord and align_all) but none of them are displaying in plugin list. I am 
> getting  following error in pymol command screen. Please help me to rectify 
> this error.
> 
> .
> 
> .
> 
> convert given font files to the PIL raster font format.
> 
> This version of pilfont supports X BDF and PCF fonts.
> 
> Unable to initialize plugin 'pilfont' (pmg_tk.startup.pilfont).
> 
> Unable to initialize plugin 'tconcoord' (pmg_tk.startup.tconcoord).
> 
> Unable to initialize plugin 'align_all' (pmg_tk.startup.align_all).
> 
> Regards
> 
> RP

-- 
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.


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Re: [PyMOL] a special phenomenon on using pymol

[Tsjerk Wassenaar]

Hi Smith,

You probably hit the  key. Or you clicked the down triangle in the
lower right menu.

Cheers,

Tsjerk

On Fri, May 20, 2016 at 7:56 AM, Smith Liu  wrote:

> Dear All,
>
> Today as every day I do, I align 2 pdb files by pymol. After a moment, I
> find the aligned 2 molecules start to rock back and forth continuously in
> the pymol window (from about 45 degree to -45 degree). Today I never used
> the rotate or rock command.
>
> Will you please explain why this phenomenon can occur?
>
> Smith
>
>
> --
> Mobile security can be enabling, not merely restricting. Employees who
> bring their own devices (BYOD) to work are irked by the imposition of MDM
> restrictions. Mobile Device Manager Plus allows you to control only the
> apps on BYO-devices by containerizing them, leaving personal data
> untouched!
> https://ad.doubleclick.net/ddm/clk/304595813;131938128;j
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>



-- 
Tsjerk A. Wassenaar, Ph.D.
--
Mobile security can be enabling, not merely restricting. Employees who
bring their own devices (BYOD) to work are irked by the imposition of MDM
restrictions. Mobile Device Manager Plus allows you to control only the
apps on BYO-devices by containerizing them, leaving personal data untouched!
https://ad.doubleclick.net/ddm/clk/304595813;131938128;j___
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
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