[PyMOL] Problem With Dynamic_Gromacs Plugin

[Stephen P. Molnar]

I just downloaded, compiled and installed gromacs-2020 without any 
warnings or errors.  However when I attempt opening the Dynamic_Gromacs 
2.2.1 plugin I get the error:


'module' object has no attribute 'showerror' and everything stops.

Now, the plugin has been working with the Debian Stretch default 
gromacs-2019.1. Further, with the gromacs 2020 installation gmx command 
executes correctly at the command line.


I may be wrong, but, might this be a PyMOL  error?

Thanks in advance.

--
Stephen P. Molnar, Ph.D.
www.molecular-modeling.net
614.312.7528 (c)
Skype:  smolnar1



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Re: [PyMOL] Ray tracing transparent sticks

[Jarrett Johnson]

Hello,

Which version are you using? We had this regression in 2.3.0 but was fixed
in the 2.3.2 patch update.

On Thu, Jan 30, 2020 at 9:34 AM Ioannis Riziotis  wrote:

> Hello!
>
> I have been trying to ray trace stick representations with transparency
> (i.e. stick_transparency = 0.5). Although surface transparency is visible
> in ray tracing, transparent sticks always appear opaque in the rendered
> image.
>
> Is there a way to resolve this? Note that in OpenGL, stick transparency
> appears normal; the problem is only in ray tracing.
>
> Thank you very much.
>
> All the best,
> Yannis
>
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-- 

*Jarrett Johnson* | Senior Developer
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