Scott,
> I have had this problem for the past few weeks, and it has been
> difficult to diagnose the cause. The problem is that in the X11 version
of pymol run on my mactel osx laptop does not interpret my three button
mouse click properly. When I click on a given atom in the UI, it
selects something else, often far away from the the
> intended selection. This is more of an annoyance, since I can
> visualize molecule, but the wizards and click menus are basically non-
functional.
I've sees slightly similar problems (mouse selection with stereo enabled
using the fglrx driver for ati firegl cards doesn't work; same selection
with stereo off works fine).
>
> If anyone out there has any suggestions I would love to hear them.
>
I don't have any solutions for you, but the graphics card driver (or X11
configuration) might be a good place to start poking around for
troubleshooting.
Good luck,
Pete
Pete Meyer
Fu Lab
BMCB grad student
Cornell University