Re: [PyMOL] different colours for isomeshes in version 1.7.4.0
There was the problem - resetting mesh_color to default did the trick. I had not been aware of the overriding property of the global setting. Thanks for your help! /Gerhard -- Gerhard Fischer, PhD Postdoctoral Research Associate University of Cambridge Department of Biochemistry 80 Tennis Court Road CB2 1GA Cambridge United Kingdom --- This e-mail message (including any attachments) is for the sole use of the intended recipient(s) and may contain confidential and privileged information. If the reader of this message is not the intended recipient, you are hereby notified that any dissemination, distribution or copying of this message (including any attachments) is strictly prohibited. If you have received this message in error, please contact the sender by reply e-mail message and destroy all copies of the original message (including attachments). On 21 January 2015 at 13:39, Thomas Holder wrote: > Hi Gerhard, > > works for me. Note that the "mesh_color" setting will take priority over > the object color, so once you set the global setting, the "color" command > will have no effect anymore on the mesh. > > Try to restore the default: > > # "default" will take object color > set mesh_color, default > # clear object settings > unset mesh_color, * > > # test > fetch 1ubq, map, type=2fofc, async=0 > isomesh m1, map, 1 > isomesh m2, map, 2 > color blue, m1 > color red, m2 > > Cheers, > Thomas > > On 19 Jan 2015, at 08:58, Gerhard Fischer wrote: > > > Hi, > > > > since upgrading to 1.7.4.0 (both when compiling manually and installing > the package through Yast on openSUSE 13.2), I can no longer give different > isomeshes (of electron density maps) separate colours. > > The only way to change the colour seems to be through changing the > global "mesh_color"-setting, but not through the GUI or the "color"-command. > > > > Is this a bug, a feature or maybe just something specific to my system? > Any ideas? > > > > > > Best regards, > > > > Gerhard > > > > -- > > Gerhard Fischer, PhD > > Postdoctoral Research Associate > > > > University of Cambridge > > Department of Biochemistry > > 80 Tennis Court Road > > CB2 1GA Cambridge > > United Kingdom > > -- > Thomas Holder > PyMOL Principal Developer > Schrödinger, Inc. > > -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] different colours for isomeshes in version 1.7.4.0
Hi Gerhard, works for me. Note that the "mesh_color" setting will take priority over the object color, so once you set the global setting, the "color" command will have no effect anymore on the mesh. Try to restore the default: # "default" will take object color set mesh_color, default # clear object settings unset mesh_color, * # test fetch 1ubq, map, type=2fofc, async=0 isomesh m1, map, 1 isomesh m2, map, 2 color blue, m1 color red, m2 Cheers, Thomas On 19 Jan 2015, at 08:58, Gerhard Fischer wrote: > Hi, > > since upgrading to 1.7.4.0 (both when compiling manually and installing the > package through Yast on openSUSE 13.2), I can no longer give different > isomeshes (of electron density maps) separate colours. > The only way to change the colour seems to be through changing the global > "mesh_color"-setting, but not through the GUI or the "color"-command. > > Is this a bug, a feature or maybe just something specific to my system? Any > ideas? > > > Best regards, > > Gerhard > > -- > Gerhard Fischer, PhD > Postdoctoral Research Associate > > University of Cambridge > Department of Biochemistry > 80 Tennis Court Road > CB2 1GA Cambridge > United Kingdom -- Thomas Holder PyMOL Principal Developer Schrödinger, Inc. -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] different colours for isomeshes in version 1.7.4.0
Hi, since upgrading to 1.7.4.0 (both when compiling manually and installing the package through Yast on openSUSE 13.2), I can no longer give different isomeshes (of electron density maps) separate colours. The only way to change the colour seems to be through changing the global "mesh_color"-setting, but not through the GUI or the "color"-command. Is this a bug, a feature or maybe just something specific to my system? Any ideas? Best regards, Gerhard -- Gerhard Fischer, PhD Postdoctoral Research Associate University of Cambridge Department of Biochemistry 80 Tennis Court Road CB2 1GA Cambridge United Kingdom --- This e-mail message (including any attachments) is for the sole use of the intended recipient(s) and may contain confidential and privileged information. If the reader of this message is not the intended recipient, you are hereby notified that any dissemination, distribution or copying of this message (including any attachments) is strictly prohibited. If you have received this message in error, please contact the sender by reply e-mail message and destroy all copies of the original message (including attachments). -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
