Re: [PyMOL] pair_fit crashes Pymol 2.5.2 (incentive, OSX) ?

[Jarrett Johnson]

Hi James,

This is a known issue. Try disabling undo before using the command.

Best,

Jarrett Johnson

On Mon, Feb 14, 2022 at 10:37 AM James Procter (Staff) <
j.proc...@dundee.ac.uk> wrote:

> Dear pymol-users
>
> Could anyone confirm that the following test of the pair_fit command
> causes a crash in the latest Pymol incentive release (2.5.2, 21st August
> 2021) ?
>
> fetch 1uwh 1z5m
> pair_fit 1uwh//A/563-582/CA, 1z5m///193-212/CA
>
> I've found this crashes 2.5.2-incentive on OSX but works fine on 2.5.0-ce
> (via homebrew).
>
>
> Thanks in advance !
> Jim Procter.
>
> Jalview Coordinator | Barton Group | University of Dundee
> www.jalview.org | www.compbio.dundee.ac.uk
>
> The University of Dundee is a registered Scottish Charity, No: SC015096
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*Jarrett Johnson* | Senior Developer, PyMOL
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Re: [PyMOL] pair_fit crashes Pymol 2.5.2 (incentive, OSX) ?

[James Procter (Staff)]

Thanks Jarret - works perfectly.

From: Jarrett Johnson 
Sent: 16 February 2022 18:10
To: James Procter (Staff) 
Cc: pymol-users@lists.sourceforge.net 
Subject: Re: [PyMOL] pair_fit crashes Pymol 2.5.2 (incentive, OSX) ?




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Hi James,

This is a known issue. Try disabling undo before using the command.

Best,

Jarrett Johnson

On Mon, Feb 14, 2022 at 10:37 AM James Procter (Staff) 
mailto:j.proc...@dundee.ac.uk>> wrote:
Dear pymol-users

Could anyone confirm that the following test of the pair_fit command causes a 
crash in the latest Pymol incentive release (2.5.2, 21st August 2021) ?

fetch 1uwh 1z5m
pair_fit 1uwh//A/563-582/CA, 1z5m///193-212/CA

I've found this crashes 2.5.2-incentive on OSX but works fine on 2.5.0-ce (via 
homebrew).


Thanks in advance !
Jim Procter.

Jalview Coordinator | Barton Group | University of Dundee
www.jalview.org<http://www.jalview.org> | 
www.compbio.dundee.ac.uk<http://www.compbio.dundee.ac.uk>

The University of Dundee is a registered Scottish Charity, No: SC015096
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--

Jarrett Johnson | Senior Developer, PyMOL

[https://drive.google.com/uc?id=1zOlB9fluGZyuInRUQgKsdjtjpR5L9z6R&export=download]

The University of Dundee is a registered Scottish Charity, No: SC015096
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[PyMOL] pair_fit crashes Pymol 2.5.2 (incentive, OSX) ?

[James Procter (Staff)]

Dear pymol-users

Could anyone confirm that the following test of the pair_fit command causes a 
crash in the latest Pymol incentive release (2.5.2, 21st August 2021) ?

fetch 1uwh 1z5m
pair_fit 1uwh//A/563-582/CA, 1z5m///193-212/CA

I've found this crashes 2.5.2-incentive on OSX but works fine on 2.5.0-ce (via 
homebrew).


Thanks in advance !
Jim Procter.

Jalview Coordinator | Barton Group | University of Dundee
www.jalview.org | www.compbio.dundee.ac.uk

The University of Dundee is a registered Scottish Charity, No: SC015096
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