Re: [PyMOL] ray command

[Tsjerk Wassenaar]

Hi Mohsen,

So raytracing is indeed not available in the educational version. I find
this a bit strange, as I regarded the educational version the
least-changed-with-respect-to-the-original (say 0.99), which did have
raytracing available. Also, I like students to give me reports with pretty
pictures, and would argue that 'educational' should also allow some basic
raytracing.

Alternatives are:

- getting an academic license
- compile from source (or get from a repository)
- export the scene and ray trace in a different program.

Hope it helps,

Tsjerk

On Tue, Jul 12, 2016 at 10:16 AM, Mohsen Chitsaz <
mohsen.chit...@flinders.edu.au> wrote:

> Hi Pymol users,
>
>
>
> The “ray command” is not working in my Educational version of Pymol. It
> seems that educational version does not allow to use this command.
>
>
>
> Does anyone have a solution for this please?
>
>
>
> Your reply is very much appreciated.
>
>
>
> Cheers
>
> Mohsen
>
>
> --
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> traffic
> patterns at an interface-level. Reveals which users, apps, and protocols
> are
> consuming the most bandwidth. Provides multi-vendor support for NetFlow,
> J-Flow, sFlow and other flows. Make informed decisions using capacity
> planning
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>



-- 
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Re: [PyMOL] ray command

[Tsjerk Wassenaar]

Hi Mohsen,

What happens? What error do you get?

Best,

Tsjerk
On Jul 12, 2016 10:46 AM, "Mohsen Chitsaz" 
wrote:

Hi Pymol users,



The “ray command” is not working in my Educational version of Pymol. It
seems that educational version does not allow to use this command.



Does anyone have a solution for this please?



Your reply is very much appreciated.



Cheers

Mohsen

--
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are
consuming the most bandwidth. Provides multi-vendor support for NetFlow,
J-Flow, sFlow and other flows. Make informed decisions using capacity
planning
reports.http://sdm.link/zohodev2dev
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patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
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[PyMOL] ray command

[Mohsen Chitsaz]

Hi Pymol users,

The "ray command" is not working in my Educational version of Pymol. It seems 
that educational version does not allow to use this command.

Does anyone have a solution for this please?

Your reply is very much appreciated.

Cheers
Mohsen
--
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
J-Flow, sFlow and other flows. Make informed decisions using capacity planning
reports.http://sdm.link/zohodev2dev___
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net

RE: [PyMOL] ray command

[David A. Horita]

Hi,
Regarding the use of the ray command, is there a way to automatically set 
either the x or y value to maintain the same aspect ratio as displayed in the 
window?  For that matter, how do you determine the number of x and y points 
displayed (other than making a bitmap and loading that into another program)?

-David Horita
 
 
 Mohammed,
 
   ray width, height
   png filename.png
 
 for example, for a 5x4 figure at 300 dpi:
 
   ray 1600,1200
   
   png hires.png
  (or use Save image... from the File menu after the ray command)
 
 Cheers,
 Warren

 

RE: [PyMOL] ray command

[Warren DeLano]

David,

There isn't currently a programmatic way of doing this, but it wouldn't be
too hard to make one.  I'll put onto the todo list support for commands
like: ray 1024; ray width=800; height=600; where the second axis is
calculated.

Note that we're currently missing an API function for getting the viewer
size (we'll need to add that), but you can rip it out of a session
dictionary constructed on-the-fly (which is grossly inefficient, but it
works):

print cmd.get_session()['main'][0:2]
[640,480]

Cheers,
Warren


 -Original Message-
 From: pymol-users-ad...@lists.sourceforge.net 
 [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of 
 David A. Horita
 Sent: Monday, April 05, 2004 11:30 AM
 To: pymol-users@lists.sourceforge.net
 Subject: RE: [PyMOL] ray command
 
 Hi,
 Regarding the use of the ray command, is there a way to 
 automatically set either the x or y value to maintain the 
 same aspect ratio as displayed in the window?  For that 
 matter, how do you determine the number of x and y points 
 displayed (other than making a bitmap and loading that into 
 another program)?
 
 -David Horita
  
  
  Mohammed,
  
  ray width, height
png filename.png
  
  for example, for a 5x4 figure at 300 dpi:
  
  ray 1600,1200

png hires.png
   (or use Save image... from the File menu after the ray command)
  
  Cheers,
  Warren
 
  
 
 
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