Re: [PyMOL] Mouse start-up setting
Jorge, You can create a .pymolrc file in your home directory to do this. From the MacOSX terminal window, issue: echo config_mouse one_button ~/.pymolrc Cheers, Warren -- DeLano Scientific LLC Subscriber Support Services mailto:del...@delsci.info -Original Message- From: pymol-users-boun...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of jzuniga Sent: Friday, February 22, 2008 11:11 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] Mouse start-up setting Can MacPymol start-up settings be edited so that it starts in the One- Button mouse mode? What file needs to be edited? Please, advise. Jorge -- --- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
Re: [PyMOL] mouse middle button
Thank-you, that worked beautifully. Before the crash the MouseWorks software can't have been working properly. Bronwyn On 18/08/2005, at 10:01 AM, Xavier Deupi wrote: Hi Bronwyn, I had the same problem (using a Logitech MX310 under OS X 10.4.2). As somebody previously suggested, I just uninstalled the Logitech software, so the os treats the mouse as 'generic'. And now the middle button behaves as expected. hope this helps, Xavier Bronwyn Carlisle wrote: Hi, A couple of things: a) I've just installed the latest MacPymol (after having a major crash and having to re-install EVERYTHING), and my middle mouse button doesn't seem to work. I can't move things around on the screen. The other buttons work fine, and the middle one scrolls OK, so I can slab - but I want to move things!! I have played with the MouseWorks thing in System Prefs, and can change the middle button clicking to do what any of the other button clicks do, but there is no option for middle button. Is there a key combination I can put in that will let it move things? b)I'm trying to make a surface and a cartoon of a CA-only structure. A search of my email archive tells me that by now Pymol should be able to create at least a ribbon from this sort of file, but I can't figure out how to do it. Can someone please instruct me? Ta Bronwyn Bronwyn Carlisle Biochemistry Department University of Otago PO Box 56 710 Cumberland St Dunedin email: bronwyn.carli...@stonebow.otago.ac.nz tel: +64 (0)3 4797704 --- SF.Net email is Sponsored by the Better Software Conference EXPO September 19-22, 2005 * San Francisco, CA * Development Lifecycle Practices Agile Plan-Driven Development * Managing Projects Teams * Testing QA Security * Process Improvement Measurement * http://www.sqe.com/ bsce5sf ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users -- Xavier Deupi, Ph.D. Department of Molecular and Cellular Physiology Beckman Center for Molecular and Genetic Medicine (B161) 279 Campus Drive, Stanford University School of Medicine Stanford, CA 94305 (USA) E-mail: xavier.de...@stanford.edu Phone: +1 (650) 725-6497 Fax : +1 (650) 725-8021 Bronwyn Carlisle Biochemistry Department University of Otago PO Box 56 710 Cumberland St Dunedin email: bronwyn.carli...@stonebow.otago.ac.nz tel: +64 (0)3 4797704
RE: [PyMOL] mouse
Thierry, This behavior could be the symptom of either malfunctioning OpenGL, or a screen with two few colors to support color-encoded picking (which is what PyMOL uses behind the scenes). Please confirm that your display is running in 24 or 32 bit color. If that is the case and picking still fails, then please try saving a png file of what you see on the screen (png filename.png). If that PNG file exhibits any distortion or artifacts, then that's the cause of the problems. Otherwise, PyMOL may have a bug... Cheers, Warren -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D. Principal Scientist DeLano Scientific LLC Voice (650)-346-1154 Fax (650)-593-4020 -Original Message- From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users- ad...@lists.sourceforge.net] On Behalf Of Thierry Granier Sent: Friday, January 16, 2004 12:52 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] mouse Good morning, I am trying to use pymol on a PC linux RedHat 9.0 using the software summit 2.2 of Xig, and I run into the following problem: after loading a molecule, when I try to click on an atom, for selection, using CTRL shif lb or CTRL shift lb, I get the message no atom found nearby I have tried all the mouse settings from the gui with no success. Any help will be appreciated, thank you Thierry Granier. --- The SF.Net email is sponsored by EclipseCon 2004 Premiere Conference on Open Tools Development and Integration See the breadth of Eclipse activity. February 3-5 in Anaheim, CA. http://www.eclipsecon.org/osdn ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
