Re: [Pytables-users] [ANN] PyTables 2.0 alpha1

2007-02-19 Thread Antonio Valentino
Il giorno Sat, 17 Feb 2007 19:01:09 +0100
Francesc Altet <[EMAIL PROTECTED]> ha scritto:

> Hi List,
> 
> After several months of hard work, Ivan and me are very proud to
> announce the public availability of the first alpha release of
> PyTables 2.0.
> 
> Despite it is labeled as alpha we think that's it is stable enough to
> deserve a look from people that is interested in developing modules
> for it or just for getting a taste of the shiny new PyTables :)
> 
> Below is the official announcement. Enjoy data!

Congratulation guys. I still have got no time to look it in depth but it
is a very impressive job! :)

> - Native HDF5 datasets with H5T_ARRAY datatypes are fully supported
> for reading now.

Could you explain this more in depth please.

> Share your experience
> =
> 
> Let us know of any bugs, suggestions, gripes, kudos, etc. you may
> have.

unfortunately I have got this error trying to run the test suite on a
fresh svn working copy:

[EMAIL PROTECTED]:~/projects/extern/pytables/tables/tests>
python test_all.py
*Warning*: NumPy version is lower than recommended: 1.0.1 < 1.0.2
***Python2.5 in 64-bit platform detected: disabling numarray/Numeric
tests***
Traceback (most recent call last): File "test_all.py", line
21, in  from tables.tests import common File
"/home/valentino/projects/extern/pytables/tables/tests/common.py", line
47, in  from tables import nra File
"/home/valentino/projects/extern/pytables/tables/nra/__init__.py", line
17, in  from tables.nra.nestedrecords import ( File
"/home/valentino/projects/extern/pytables/tables/nra/nestedrecords.py",
line 27, in  import numarray ImportError: No module named
numarray

ciao

-- 
Antonio Valentino <[EMAIL PROTECTED]>

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[Pytables-users] PyTables 2.0a1a released

2007-02-19 Thread Francesc Altet
Hi List,

I've just done a microrelease, tagged as 2.0a1a, in order to fix some
problems with the Numeric tests (the problems where only in test code).

As usual, you can find the new package in:
http://www.pytables.org/download/preliminary/

I've also put there the PDF and HTML versions of the manual for 2.0
alpha. Please have in mind that some sections in the manual can be
obsolete (specially the chapter "Optimization tips"), although the
reference chapter should be fairly up-to-date.

Enjoy!

-- 
Francesc Altet|  Be careful about using the following code --
Carabos Coop. V.  |  I've only proven that it works, 
www.carabos.com   |  I haven't tested it. -- Donald Knuth


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Re: [Pytables-users] PyTables 2.0a1a released

2007-02-19 Thread Antonio Valentino
Il giorno Mon, 19 Feb 2007 10:50:21 +0100
Francesc Altet <[EMAIL PROTECTED]> ha scritto:

> Hi List,
> 
> I've just done a microrelease, tagged as 2.0a1a, in order to fix some
> problems with the Numeric tests (the problems where only in test
> code).
> 
> As usual, you can find the new package in:
> http://www.pytables.org/download/preliminary/
> 
> I've also put there the PDF and HTML versions of the manual for 2.0
> alpha. Please have in mind that some sections in the manual can be
> obsolete (specially the chapter "Optimization tips"), although the
> reference chapter should be fairly up-to-date.
> 
> Enjoy!
> 

Hi Francesc,
unfortunately the error I signaled in the previous post keep rising
(svn rev:2396) :(

N.B. it seems to be related to numarray not Nuneric

ciao

-- 
Antonio Valentino <[EMAIL PROTECTED]>

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Re: [Pytables-users] PyTables 2.0a1a released

2007-02-19 Thread Francesc Altet
Hola Antonio,

Yes. I've no tested alpha1 with no numarray and/or Numeric installed.
Now, I've committed the patches (hopefully the correct ones) in trunk.
Please, can you confirm that your tests runs well in your platform?

If all goes well, I'll do a new micro-release later today.

Ciao,

El dl 19 de 02 del 2007 a les 11:29 +0100, en/na Antonio Valentino va
escriure:
> Il giorno Mon, 19 Feb 2007 10:50:21 +0100
> Francesc Altet <[EMAIL PROTECTED]> ha scritto:
> 
> > Hi List,
> > 
> > I've just done a microrelease, tagged as 2.0a1a, in order to fix some
> > problems with the Numeric tests (the problems where only in test
> > code).
> > 
> > As usual, you can find the new package in:
> > http://www.pytables.org/download/preliminary/
> > 
> > I've also put there the PDF and HTML versions of the manual for 2.0
> > alpha. Please have in mind that some sections in the manual can be
> > obsolete (specially the chapter "Optimization tips"), although the
> > reference chapter should be fairly up-to-date.
> > 
> > Enjoy!
> > 
> 
> Hi Francesc,
> unfortunately the error I signaled in the previous post keep rising
> (svn rev:2396) :(
> 
> N.B. it seems to be related to numarray not Nuneric
> 
> ciao
> 
-- 
Francesc Altet|  Be careful about using the following code --
Carabos Coop. V.  |  I've only proven that it works, 
www.carabos.com   |  I haven't tested it. -- Donald Knuth


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Re: [Pytables-users] PyTables 2.0a1a released

2007-02-19 Thread Antonio Valentino
Alle 14:18, lunedì 19 febbraio 2007, Francesc Altet ha scritto:
> Hola Antonio,
>
> Yes. I've no tested alpha1 with no numarray and/or Numeric installed.
> Now, I've committed the patches (hopefully the correct ones) in trunk.
> Please, can you confirm that your tests runs well in your platform?
>
> If all goes well, I'll do a new micro-release later today.
>
> Ciao,

OK, the test suite runs for rev:2401.
There are some failures (see the attached file) but I don't know if they are 
due to the numpy version (1.0.1).

ciao

-- 
Antonio Valentino
Consorzio Innova
Contrada Chiatamura lotto 188
Zona Industriale La Martella
75100 Matera (MT) Italy


tables20_testlog.txt.bz2
Description: BZip2 compressed data
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Re: [Pytables-users] PyTables 2.0a1a released

2007-02-19 Thread Francesc Altet
El dl 19 de 02 del 2007 a les 14:43 +0100, en/na Antonio Valentino va
escriure:
> Alle 14:18, lunedì 19 febbraio 2007, Francesc Altet ha scritto:
> > Hola Antonio,
> >
> > Yes. I've no tested alpha1 with no numarray and/or Numeric installed.
> > Now, I've committed the patches (hopefully the correct ones) in trunk.
> > Please, can you confirm that your tests runs well in your platform?
> >
> > If all goes well, I'll do a new micro-release later today.
> >
> > Ciao,
> 
> OK, the test suite runs for rev:2401.
> There are some failures (see the attached file) but I don't know if they are 
> due to the numpy version (1.0.1).

Nope. These should be due to your Pyrex version. Please upgrade Pyrex to
at least 0.9.5, *regenerate* all .c files and rerun again.

Ciao,

-- 
Francesc Altet|  Be careful about using the following code --
Carabos Coop. V.  |  I've only proven that it works, 
www.carabos.com   |  I haven't tested it. -- Donald Knuth


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Re: [Pytables-users] PyTables 2.0a1a released

2007-02-19 Thread Antonio Valentino
Alle 14:51, lunedì 19 febbraio 2007, Francesc Altet ha scritto:
> El dl 19 de 02 del 2007 a les 14:43 +0100, en/na Antonio Valentino va
>
> escriure:
> > Alle 14:18, lunedì 19 febbraio 2007, Francesc Altet ha scritto:
> > > Hola Antonio,
> > >
> > > Yes. I've no tested alpha1 with no numarray and/or Numeric installed.
> > > Now, I've committed the patches (hopefully the correct ones) in trunk.
> > > Please, can you confirm that your tests runs well in your platform?
> > >
> > > If all goes well, I'll do a new micro-release later today.
> > >
> > > Ciao,
> >
> > OK, the test suite runs for rev:2401.
> > There are some failures (see the attached file) but I don't know if they
> > are due to the numpy version (1.0.1).
>
> Nope. These should be due to your Pyrex version. Please upgrade Pyrex to
> at least 0.9.5, *regenerate* all .c files and rerun again.
>
> Ciao,

you are right :)

python test_all.py --heavy 2>&1 |tee ~/tables20_testlog.txt
/home/valentino/projects/extern/pytables/tables/leaf.py:149: UserWarning: lzo 
compression library is not available. Using zlib instead!.
  "%s compression library is not available. Using zlib instead!." %(complib))

[cut]

Ran 2167 tests in 93.669s

OK
*Warning*: NumPy version is lower than recommended: 1.0.1 < 1.0.2
***Python2.5 in 64-bit platform detected: disabling numarray/Numeric tests***
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
PyTables version:  2.0a1
HDF5 version:  1.6.5
NumPy version: 1.0.1
Zlib version:  1.2.3
BZIP2 version: 1.0.3 (15-Feb-2005)
Python version:2.5 (r25:51908, Jan  9 2007, 17:00:50)
[GCC 4.1.2 20061115 (prerelease) (SUSE Linux)]
Platform:  linux2-x86_64
Byte-ordering: little
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing the complete test suite!
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Skipping Numeric test suite.
Skipping numarray test suite.
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=

-- 
Antonio Valentino
Consorzio Innova
Contrada Chiatamura lotto 188
Zona Industriale La Martella
75100 Matera (MT) Italy

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[Pytables-users] [ANN] PyTables 2.0a1b new micro-release is out

2007-02-19 Thread Francesc Altet
Hi List,

After fixing some problems with installation and some other minor
issues, another micro-release (the second of the day), dubbed as 2.0a1b,
is available. You can download this from the SVN repository:
http://pytables.org/svn/pytables/trunk/ or from:
http://www.pytables.org/download/preliminary/ [docs are available here].

There are still some small issues that persist in the FileNode module.
They appear only when you *install* PyTables and run the test suite from
the installation directory. More details here:
http://www.pytables.org/trac/ticket/34

This is not grave at all (it only affects the *installed* tests, not
real code), and will be hopefully addressed in another alpha release.

Well, hopefully this will be the last release for today ;)

-- 
Francesc Altet|  Be careful about using the following code --
Carabos Coop. V.  |  I've only proven that it works, 
www.carabos.com   |  I haven't tested it. -- Donald Knuth


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