Re: [Rd] R292 on AIX53 using gcc
Hello -- I haven't received any respones to my previous post on compiling R2.9.2 for AIX 5.3. Meanwhile, I have looked at the following post by Ei-ji Nakama [http://tolstoy.newcastle.edu.au/R/e4/devel/08/07/2171.html] and it appears that all the changes suggested in the patch are already in R2.9.2 Makefiles. I have also looked at the documentation under R-Forge/AIX page [http://r-forge.r-project.org/projects/aix/]. That does not seem to help either. Bottomline, I am trying to compile R2.9.2 on a AIX 5.3 Power5 box with gcc 4.3 and get the following error: gcc -maix64 -pthread -std=gnu99 -Wl,-brtl -Wl,-bexpall -Wl,-bpT:0x1 -Wl,-bpD:0x11000 -lc -L/usr/local/lib -o R.bin Rmain.o -L../../lib -lR -lRblas ld: 0711-224 WARNING: Duplicate symbol: .memcpy, memcpy, .bcopy, bcopy, .memmove, .memset, memset, .fres, fres ld: 0711-345 Use the -bloadmap or -bnoquiet option to obtain more information. ld: 0711-317 ERROR: Undefined symbol: R_running_as_main_program Command used: ./configure --enable-R-shlib --enable-BLAS-shlib --without-iconv ; make make.log 21 I would really appreciate any help. Thanks in advance. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] R292 on AIX53 using gcc
Hello -- after my previous post, I tried to compile R 2.9.2 using xlc. The config.site changes are: == OBJECT_MODE=64 AR=ar -X64 R_SHELL=/usr/bin/bash CONFIG_SHELL=/usr/bin/bash CC=xlc_r -q64 CFLAGS=-O -qstrict CPPFLAGS=-I/usr/include -I/usr/local/include -I/opt/freeware/include -I/usr/X11R6/include CXX=xlC_r -q64 CXXFLAGS=-O -qstrict LDFLAGS=-L/opt/freeware/lib64 -L/opt/freeware/64/lib -L/opt/freeware/lib -L/usr/local/lib -L/usr/lib F77=xlf_r -q64 FFLAGS=-O -qstrict FC=xlf95 -q64 FCFLAGS=-O -qstrict MAKE=/opt/freeware/bin/make == Error -- mkdir ../../../../library/grDevices/libs Warning in solve.default(rgb) : unable to load shared library '/usr/local/R-2.9.2/modules//lapack.so': rtld: 0712-001 Symbol idamax was referenced from module /usr/local/R-2.9.2/lib/libRlapack.so(), but a runtime definition of the symbol was not found. rtld: 0712-001 Symbol dger was referenced from module /usr/local/R-2.9.2/lib/libRlapack.so(), but a runtime definition of the symbol was not found. .. Error in solve.default(rgb) : lapack routines cannot be loaded Error: unable to load R code in package 'grDevices' Execution halted make: The error code from the last command is 1. Thanks in advance. I would really appreciate any help. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
[Rd] R292 on AIX53 using gcc
I apologize for cross posting this message in the R-help group as well. Having posted it there a couple of hours ago, I felt this may be a more appropriate forum for a question of this type. Hello -- I am unable to build R 2.9.2 on IBM PowerPC AIX5.3. I would appreciate any help in this matter. ===details== Machine: IBM PowerPC_POWER5 / 4 proc, 1499 MHz 64-bit / AIX 5.3.0.0 Building R 2.9.2 using gcc/g++/gfortran 4.2.4 Config.site changes are: OBJECT_MODE=64 CONFIG_SHELL=/usr/bin/bash LIBICONV=/opt/freeware/lib AR=ar -X64 CC=gcc -maix64 F77=gfortran -maix64 LDFLAGS=-L/opt/freeware/lib64 -L/opt/freeware/64/lib -L/opt/freeware/lib -L/usr/local/lib CXX=g++ -maix64 FC=gfortran -maix64 R_BROWSER=/opt/freeware/bin/firefox MAKE=/opt/freeware/bin/make Command for configure: ./configure --enable-R-shlib Looks like I have to set OBJECT_MODE explicitly on the command line. So, I enter: set OBJECT_MODE=64. It does not seem to help that I have it in config.site. make stops with the following error: gcc -maix64 -std=gnu99 -Wl,-brtl -Wl,-bexpall -Wl,-bpT:0x1 -Wl,-bpD:0x11000 -lc -L/opt/freeware/lib64 -L/opt/freeware/64/lib -L/opt/freeware/lib -L/usr/local/lib -o R.bin Rmain.o -L../../lib -lR ld: 0711-224 WARNING: Duplicate symbol: .memcpy ...duplicate symbol warning for: memcpy,bcopy,memset,fres ld: 0711-317 ERROR: Undefined symbol: R_running_as_main_program collect2: ld returned 8 exit status make: The error code from the last command is 1. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
