Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on Windows
- Original Message - From: Henrik Bengtsson h...@biostat.ucsf.edu To: John Fox j...@mcmaster.ca Cc: R-devel r-devel@r-project.org Sent: Tuesday, January 27, 2015 10:15:36 AM Subject: Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on Windows It works again using: % R --version R Under development (unstable) (2015-01-26 r67627) -- Unsuffered Consequences Copyright (C) 2015 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 (64-bit) Indeed. I've closed PR#16172. Dan /Henrik On Mon, Jan 26, 2015 at 9:54 AM, John Fox j...@mcmaster.ca wrote: Dear all, I've noticed the following problem for the past several days: snip update.packages(ask=FALSE) . . . trying URL 'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip' Error in download.file(url, destfile, method, mode = wb, ...) : cannot open URL 'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip' In addition: Warning message: In download.file(url, destfile, method, mode = wb, ...) : cannot open: HTTP status was '404 Not Found' Warning in download.packages(pkgs, destdir = tmpd, available = available, : download of package 'zoo' failed snip Apparently, the subdirectory for the version number (/3.2) is missing from the URL. OTOH, install.packages() works fine: snip install.packages(zoo) trying URL 'http://cran.utstat.utoronto.ca/bin/windows/contrib/3.2/zoo_1.7-11.zip' Content type 'application/zip' length 878614 bytes (858 KB) opened URL downloaded 858 KB package 'zoo' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\John Fox\AppData\Local\Temp\RtmpuKqvB0\downloaded_packages snip Session info: snip sessionInfo() R Under development (unstable) (2015-01-25 r67615) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 locale: [1] LC_COLLATE=English_Canada.1252 LC_CTYPE=English_Canada.1252 [3] LC_MONETARY=English_Canada.1252 LC_NUMERIC=C [5] LC_TIME=English_Canada.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] tools_3.2.0 snip Best, John --- John Fox, Professor McMaster University Hamilton, Ontario, Canada http://socserv.mcmaster.ca/jfox/ --- This email has been checked for viruses by Avast antivirus software. http://www.avast.com __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on Windows
Dear Dan and Henrik,
Yes -- thanks. I discovered that earlier today.
Best,
John
-Original Message-
From: R-devel [mailto:r-devel-boun...@r-project.org] On Behalf Of Dan
Tenenbaum
Sent: January-27-15 1:25 PM
To: Henrik Bengtsson
Cc: John Fox; R-devel
Subject: Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on
Windows
- Original Message -
From: Henrik Bengtsson h...@biostat.ucsf.edu
To: John Fox j...@mcmaster.ca
Cc: R-devel r-devel@r-project.org
Sent: Tuesday, January 27, 2015 10:15:36 AM
Subject: Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on
Windows
It works again using:
% R --version
R Under development (unstable) (2015-01-26 r67627) -- Unsuffered
Consequences
Copyright (C) 2015 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
Indeed. I've closed PR#16172.
Dan
/Henrik
On Mon, Jan 26, 2015 at 9:54 AM, John Fox j...@mcmaster.ca wrote:
Dear all,
I've noticed the following problem for the past several days:
snip
update.packages(ask=FALSE)
. . .
trying URL
'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip'
Error in download.file(url, destfile, method, mode = wb, ...) :
cannot open URL
'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip'
In addition: Warning message:
In download.file(url, destfile, method, mode = wb, ...) :
cannot open: HTTP status was '404 Not Found'
Warning in download.packages(pkgs, destdir = tmpd, available =
available,
:
download of package 'zoo' failed
snip
Apparently, the subdirectory for the version number (/3.2) is
missing from the URL. OTOH, install.packages() works fine:
snip
install.packages(zoo)
trying URL
'http://cran.utstat.utoronto.ca/bin/windows/contrib/3.2/zoo_1.7-11.zip'
Content type 'application/zip' length 878614 bytes (858 KB) opened
URL downloaded 858 KB
package 'zoo' successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\John
Fox\AppData\Local\Temp\RtmpuKqvB0\downloaded_packages
snip
Session info:
snip
sessionInfo()
R Under development (unstable) (2015-01-25 r67615)
Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7
x64 (build 7601) Service Pack 1
locale:
[1] LC_COLLATE=English_Canada.1252 LC_CTYPE=English_Canada.1252
[3]
LC_MONETARY=English_Canada.1252 LC_NUMERIC=C [5]
LC_TIME=English_Canada.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods
base
loaded via a namespace (and not attached):
[1] tools_3.2.0
snip
Best,
John
---
John Fox, Professor
McMaster University
Hamilton, Ontario, Canada
http://socserv.mcmaster.ca/jfox/
---
This email has been checked for viruses by Avast antivirus software.
http://www.avast.com
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
[[alternative HTML version deleted]]
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
---
This email has been checked for viruses by Avast antivirus software.
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on Windows
It works again using: % R --version R Under development (unstable) (2015-01-26 r67627) -- Unsuffered Consequences Copyright (C) 2015 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 (64-bit) /Henrik On Mon, Jan 26, 2015 at 9:54 AM, John Fox j...@mcmaster.ca wrote: Dear all, I've noticed the following problem for the past several days: snip update.packages(ask=FALSE) . . . trying URL 'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip' Error in download.file(url, destfile, method, mode = wb, ...) : cannot open URL 'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip' In addition: Warning message: In download.file(url, destfile, method, mode = wb, ...) : cannot open: HTTP status was '404 Not Found' Warning in download.packages(pkgs, destdir = tmpd, available = available, : download of package 'zoo' failed snip Apparently, the subdirectory for the version number (/3.2) is missing from the URL. OTOH, install.packages() works fine: snip install.packages(zoo) trying URL 'http://cran.utstat.utoronto.ca/bin/windows/contrib/3.2/zoo_1.7-11.zip' Content type 'application/zip' length 878614 bytes (858 KB) opened URL downloaded 858 KB package 'zoo' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\John Fox\AppData\Local\Temp\RtmpuKqvB0\downloaded_packages snip Session info: snip sessionInfo() R Under development (unstable) (2015-01-25 r67615) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 locale: [1] LC_COLLATE=English_Canada.1252 LC_CTYPE=English_Canada.1252 [3] LC_MONETARY=English_Canada.1252 LC_NUMERIC=C [5] LC_TIME=English_Canada.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] tools_3.2.0 snip Best, John --- John Fox, Professor McMaster University Hamilton, Ontario, Canada http://socserv.mcmaster.ca/jfox/ --- This email has been checked for viruses by Avast antivirus software. http://www.avast.com __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on Windows
- Original Message - From: Henrik Bengtsson h...@biostat.ucsf.edu To: John Fox j...@mcmaster.ca Cc: R-devel r-devel@r-project.org Sent: Monday, January 26, 2015 11:12:39 AM Subject: Re: [Rd] problem with update.packages() in R-Devel (3.2.0) on Windows We are several seeing this one. It's a known bug, cf. https://stat.ethz.ch/pipermail/r-devel/2015-January/070513.html See also https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=16172 Henrik On Mon, Jan 26, 2015 at 9:54 AM, John Fox j...@mcmaster.ca wrote: Dear all, I've noticed the following problem for the past several days: snip update.packages(ask=FALSE) . . . trying URL 'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip' Error in download.file(url, destfile, method, mode = wb, ...) : cannot open URL 'http://cran.utstat.utoronto.ca/src/contrib/zoo_1.7-11.zip' In addition: Warning message: In download.file(url, destfile, method, mode = wb, ...) : cannot open: HTTP status was '404 Not Found' Warning in download.packages(pkgs, destdir = tmpd, available = available, : download of package 'zoo' failed snip Apparently, the subdirectory for the version number (/3.2) is missing from the URL. It's not that the version number is missing, it's that it's looking in the src/contrib section of the repository (which doesn't have a version number). Dan OTOH, install.packages() works fine: snip install.packages(zoo) trying URL 'http://cran.utstat.utoronto.ca/bin/windows/contrib/3.2/zoo_1.7-11.zip' Content type 'application/zip' length 878614 bytes (858 KB) opened URL downloaded 858 KB package 'zoo' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\John Fox\AppData\Local\Temp\RtmpuKqvB0\downloaded_packages snip Session info: snip sessionInfo() R Under development (unstable) (2015-01-25 r67615) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 locale: [1] LC_COLLATE=English_Canada.1252 LC_CTYPE=English_Canada.1252 [3] LC_MONETARY=English_Canada.1252 LC_NUMERIC=C [5] LC_TIME=English_Canada.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] tools_3.2.0 snip Best, John --- John Fox, Professor McMaster University Hamilton, Ontario, Canada http://socserv.mcmaster.ca/jfox/ --- This email has been checked for viruses by Avast antivirus software. http://www.avast.com __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
