Re: [R] Problem with predict.lm()
Hi, It seems to be working in my R. Although it is throwing the warning message Warning message:'newdata' had 200 rows but variables found have 100 rows y [1] -1.071307580 0.102414204 -0.965046207 1.386057875 0.726835339 [6] -0.186549950 -0.777144258 1.137210314 -1.069446945 -0.696084338 [11] -0.467686285 0.997316781 0.776265490 -1.385720997 -0.007438381 [16] 0.302821728 0.024075173 -0.590401970 0.877104292 0.652724314 [21] 2.142135078 2.023051454 -0.547221960 0.342600702 0.080848203 [26] 0.074609232 0.255946197 -0.191242759 1.036445108 0.895068954 [31] 0.589477883 0.123230750 1.467210735 -1.636657283 -0.131504288 [36] -0.665000122 0.390977868 0.546802014 0.445498091 1.063872749 [41] 1.406788635 -0.037147550 -1.047190960 -0.189105987 0.069617165 [46] -0.049760285 -1.454279226 0.358351554 0.246587937 -0.060735329 [51] 1.664530111 -0.475931484 0.405480604 1.560446941 -0.030537155 [56] -1.060319583 -1.828624216 -0.429391165 0.301697744 -0.029593593 [61] -1.696307754 0.342678986 -0.433965195 -0.947338037 0.318186677 [66] 0.539630789 -1.354555193 0.086168702 0.002950100 1.783486665 [71] -1.182419158 -0.930524123 0.376579158 -1.085035387 1.186125702 [76] 0.719738391 -0.486692820 -2.105396602 0.531238276 1.302812739 [81] 0.347851244 0.016452693 0.417535566 0.277705766 2.286275977 [86] 1.610183518 2.032037030 1.319074179 1.129375593 0.176684807 [91] -0.630517144 1.302785450 0.994275267 -0.060116993 -0.655966924 [96] 1.628197169 1.935532651 -1.635783346 -1.172511179 1.238336597> ynew 1 2 3 4 5 6 -0.270916637 0.169149841 0.191348061 -0.009541999 0.112027155 0.016242323 7 8 9 10 11 12 -0.062178365 0.275322344 0.397030485 0.565078468 0.301230303 0.305405674 13 14 15 16 17 18 0.552136794 -0.151275710 0.470280882 0.349631748 0.022005869 0.181384646 19 20 21 22 23 24 0.143719339 0.478791323 0.518731127 0.229860133 -0.199433324 0.310576455 25 26 27 28 29 30 0.127612633 -0.157347145 0.413807523 0.007961485 -0.288867750 0.208759771 31 32 33 34 35 36 0.286165027 0.299492579 0.197312294 0.135601904 0.452828662 0.187191405 37 38 39 40 41 42 0.335596502 -0.109960231 -0.303770506 -0.276385255 0.429700474 0.003930969 43 44 45 46 47 48 0.184186301 0.140858190 0.479882236 0.182523553 -0.133845870 0.443940376 49 50 51 52 53 54 0.070571673 -0.383780163 0.362153269 0.202527841 0.164299813 0.327998904 55 56 57 58 59 60 0.047612361 -0.032167295 0.060976285 0.231929803 -0.449532973 0.109925656 61 62 63 64 65 66 0.468842330 0.108507841 0.158697337 -0.125813680 0.501159861 0.101646132 67 68 69 70 71 72 0.194383106 -0.006185569 0.354467348 0.340013811 0.088757961 0.439984356 73 74 75 76 77 78 0.330976669 0.449337326 0.081841142 -0.190123754 0.337794560 -0.111895039 79 80 81 82 83 84 0.598231564 0.444399789 0.388313945 0.244270482 0.200026237 0.009025077 85 86 87 88 89 90 0.341093767 -0.164196034 0.825849472 0.325975911 0.494473323 0.270037159 91 92 93 94 95 96 0.369787280 0.247455471 0.282701738 -0.541688411 -0.145796547 0.073172268 97 98 99 100 0.685833173 -0.079174316 -0.193161949 -0.137517175 Arnab Kumar Maity Graduate Teaching Assistant Division of Statistics Northern Illinois University DeKalb, Illinois 60115 U.S.A From: Martin Spindler To: r-help@r-project.org Sent: Wednesday, April 29, 2015 9:21 AM Subject: [R] Problem with predict.lm() Dear all, the following example somehow uses the "old data" (X) to make the predictions, but not the new data Xnew as intended. y <- rnorm(100) X <- matrix(rnorm(100*10), ncol=10) lm <- lm(y~X) Xnew <- matrix(rnorm(100*20), ncol=10) ynew <- predict(lm, newdata=as.data.frame(Xnew)) #prediction in not made for Xnew How can I foce predict.lm to use use the new data? Thank you very much for your efforts in advance! Best, Martin __ R-help@r-project.org mai
Re: [R] problem in search function
Please try help(rnorm) Thanks & Regards,Arnab Arnab Kumar Maity Graduate Teaching Assistant Division of Statistics Northern Illinois University DeKalb, Illinois 60115 U.S.A From: Debojyoti Samadder To: r-help@r-project.org Sent: Monday, April 6, 2015 7:50 AM Subject: [R] problem in search function Dear sir, I tried "help.search("rnorm")" in R version 3.1.2 . It gave a error "Error in `[<-`(`*tmp*`, , "name", value = sub("\\.[^.]*$", "", basename(vDB$File))) : subscript out of bounds". Can you tell me the reason.It may be silly. Regards Debojyoti Samadder [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] help please >>metro_hastings function
Hi, I have used this function before successfully. I could help you if you could provide your code. Thanks & Regards,Arnab From: hms Dreams To: "r-help@r-project.org" Sent: Saturday, February 14, 2015 6:27 AM Subject: [R] help please >>metro_hastings function Hi :)anybody can help me please I'm trying to use Metro_Hastings ( MHadaptive package)the proplem is: How can I know the covariance matrix( prop_sigma ) to enter it in Metro_Hastings: mcmc_r=Metro_Hastings(li_func=baysianlog, pars=c(1,1,1), prop_sigma =NULL,par_names=c('alpha','gamma','delta'),data=x ) its gave me an error , I must enter the cov matrix but I don't know how to calculate it, somebody told me to wrote the function without prop_sigma but its also gave me an error what can I do?? Thank you,Sara [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to get the error and error variance after HB using bayesm
Hello Michael, I have a question here. Does Bayesian paradigm deal with MSE kind of stuff? Thanks & Regards, Arnab Arnab Kumar Maity Graduate Teaching Assistant Division of Statistics Northern Illinois University DeKalb, IL 60115 Email: ma...@math.niu.edu Ph: 779-777-3428 On Fri, Feb 13, 2015 at 4:45 AM, Michael Langmaack < michael.langma...@the-klu.org> wrote: > Hello all, > > I have a question concerning bayesian regression in R using the package > bayesm (version 2.2-5) by Peter Rossi. I have binary choice data and > estimated individual coefficients using the command > rhierBinLogit(Data=Data,Mcmc=Mcmc). That worked out properly, conversion > plots, histograms, parameter are fine. No a have to compute the errors and > the error variance or something like the MSE. But I do not know how to do. > I did not find a hint so far. I would be more than happy if anybody can > help me. Thanks in advance! > > Best regards, > Michael > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Installing RStudio
Dear John, I think you have to specify the directory of R in the R-studio installation process. Somehow the installation wizard is unable to find the address of R in your system. Thanks & Regards, Arnab Arnab Kumar Maity Graduate Teaching Assistant Division of Statistics Northern Illinois University DeKalb, IL 60115 Email: ma...@math.niu.edu Ph: 779-777-3428 On Thu, Feb 12, 2015 at 10:22 AM, John Sorkin wrote: > Windows 7, 64-bit. > > I am trying to install RStudio. Before installing RStudio, I installed R > 3.1.2. During the installation or R, I installled (as per the default) 32- > and 64-bit packages. When I tried to install RStudio, I received the message > R does not appear to be installed. Please install R before using RStudio. > I know R is installed, beacuse I am able to run R. > Can anyone suggest what I can do to get RStudio installed? > Thank you > John > > John David Sorkin M.D., Ph.D. > Professor of Medicine > Chief, Biostatistics and Informatics > University of Maryland School of Medicine Division of Gerontology and > Geriatric Medicine > Baltimore VA Medical Center > 10 North Greene Street > GRECC (BT/18/GR) > Baltimore, MD 21201-1524 > (Phone) 410-605-7119 > (Fax) 410-605-7913 (Please call phone number above prior to faxing) > > Confidentiality Statement: > This email message, including any attachments, is for ...{{dropped:16}} __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.