Re: [R] Histogram plot help
Thanks, Rui and David! -- View this message in context: http://r.789695.n4.nabble.com/Histogram-plot-help-tp4651958p4652065.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Histogram plot help
Dear All: I plotted a histogram with Abline, clipping with color codes but i run into some problems. The abline' does not show up at all, and when i request the 'prob=True' (to obtain the freqs), my clipped region colors the section of the graph instead of the plot only. Is there any way i can get the y-axis figures to be in whole numbers rather than decimals? Many thanks for your help. YA Here are the working codes i am tweaking. Everything worked fine before i trying adding stuffs (prob=T, etc). x - rnorm(1000) hist(x, xlim=c(-4,4),ylab=Prevalence,prob=T,lwd=3,las=1) lines(density(x),col=black,lwd=2) usr - par(usr) clip(usr[1], -2, usr[3], usr[4]) hist(x, col = 'red', add = TRUE) clip(2, usr[2], usr[3], usr[4]) hist(x, col = 'blue', add = TRUE) abline(v=c(-1),lty=1,lwd=3,col=black) do.call(clip, as.list(usr)) # reset to plot region -- View this message in context: http://r.789695.n4.nabble.com/Histogram-plot-help-tp4651958.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Plot(x,y) help
Dear All:
I would any appreciate any help with this plot I am struggling with.
I have 4 estimates (95% CIs) I want to plot. I want the CI lines to be
horizontal on each plotted point. I was trying to tweak some old codes (was
for a vertical CI lines) into horizontal but not much dice.
Many thanks in advance for your help.
YA
My working codes:
x=c(1,1,1,1.1,1.1,1.1,2,2,2,2.1,2.1,2.1)
y=c(1.73,1.30,2.30, 1.83,1.36,2.45,1.46,1.07,2.00,1.58,1.15,2.17)
ptidx = seq(1,12,by=3)
lciidx = seq(2,12,by=3)
uciidx = seq(3,12,by=3)
plot(x,y, type=n,axes=F, xlab=PR(95% CI),ylab= )
points(x[ptidx],y[ptidx],pch=19,cex=4.5)
points(x[lciidx],y[lciidx],pch=_,cex=4.5)
points(x[uciidx],y[uciidx],pch=_,cex=4.5)
box()
for(i in 1:4)
{
lines(c(x[lciidx[i]],x[uciidx[i]]),c(y[lciidx[i]],y[uciidx[i]],lwd=4,cex=4.5))
}
--
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and provide commented, minimal, self-contained, reproducible code.
Re: [R] Plot(x,y) help
Thanks Jim and Rui. -- View this message in context: http://r.789695.n4.nabble.com/Plot-x-y-help-tp4650874p4650906.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Centering labels on X-axis
Thanks Jim and Rui. My apologies, i did not give enough info on my plot. I am using : plot(x,y) for a line plot. I want to center the labels on the x-axis for each tick. Thanks. -- View this message in context: http://r.789695.n4.nabble.com/Centering-labels-on-X-axis-tp4646761p4646888.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Centering labels on X-axis
Dear all: I am trying to center labels on my plot with not much success. I have tried text(), mtext() but it's not working. I think I am using the wrong function for my task. Any help will be appreciated. My working codes. axis(1, at=c(1,2,3,4,5),font.lab=2,cex.axis=1.5,cex.lab=3,label=c(W0,CWH2,CWHmc,CH2,CHmc) ,text=c(1.5,2.5,3.5,4.5,5.5)) Many thanks in advance YA -- View this message in context: http://r.789695.n4.nabble.com/Centering-labels-on-X-axis-tp4646761.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Conditional Logistic regression with random effects / 2 random effects logit models
Dear All: I am stuck on this problem and I could use some help from folks out there. I want to build a conditional logistic model with random effects or logistic regression with 2 random effects. I have data on mothers and their kids. I want to condition 1 mom predictor(0/1) and also for sibling clustering (multiple kids per mom). I would appreciate any info on a package to use, and a help on writing the codes. Variables : MomID as random 1 , momcondpredictor(0/1) as random 2 , mommainpredictor + covariate kidoutcome(0/1) regressed mompredictor1 + covariates + the 2 random effects. Many thanks for your help. YA -- View this message in context: http://r.789695.n4.nabble.com/Conditional-Logistic-regression-with-random-effects-2-random-effects-logit-models-tp4635528.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] calc.relimp pmvd for US R-user
Dear All: I am calculating the relative importance of a regressor in a linear model. Does anyone know how I can obtain/install the 'pmvd' computation type? I am a US user. Regards, Y -- View this message in context: http://r.789695.n4.nabble.com/calc-relimp-pmvd-for-US-R-user-tp3808752p3808752.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Clearing Console; of weeks of codes!
Dear All: I do see I have weeks of codes in my console when I check with my arrow up keys. I have been clearing them with Control L but it seems to clear it clear the screen temporally. I do see the previous codes again when I open R the next day, after quitting the session! Q: How do I clear this? Thanks; YA -- View this message in context: http://r.789695.n4.nabble.com/Clearing-Console-of-weeks-of-codes-tp3447506p3447506.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Clearing Console- rm(list=ls(all=TRUE)) not working for me
Dear all again: I have been trying to clear weeks of codes in my R console, even after quitting and coming back another day!. One of you out there graciously suggested this rm(list=ls(all=TRUE)). I tried this but no dice. Codes tried. Ctrl +L , clears for the time... and the the latest i used ... rm(list=ls(all=TRUE)) Does anybody has another option of clearing the console of old codes?. Thanks, YA -- View this message in context: http://r.789695.n4.nabble.com/Clearing-Console-rm-list-ls-all-TRUE-not-working-for-me-tp3448681p3448681.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Clearing Console; of weeks of codes!
Yep... Hitting the up arrow key upon the next initialization shows all the previous codes. I.e. after q() --- Y and re opening R console the next time. -- View this message in context: http://r.789695.n4.nabble.com/Clearing-Console-of-weeks-of-codes-tp3447506p3450541.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] GAMLSS Question
Dear All: I have succeeded in fitting a GAMLSS.dist model to growth data I am working with it. My aim is to create a matrix of predicted percentiles and the corresponding the fitted model's sigma mu nu by agebins. Q: How do it generate these parameters as in L M S per Cole and Green 1992? Here are my working codes. Name of fitted model is gamlssfit Agebin-seq(6,36,6) centmatx -centiles.pred(gamlssfit,xname=agemos,xvalues=Agebin,cent=c(10,25,50,75,90)) Although I got matrix of the percentiles by agebins, I want to obtain the L M S/sigma mu nu corresponding to the same agebins. Any help here will be appreciated. Thanks, Y Addo -- View this message in context: http://r.789695.n4.nabble.com/GAMLSS-Question-tp3389986p3389986.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Help on 'object(s) are masked from 'package:base
Dear All: I am a newbie to R. I am trying to use the lmsqreg.fit pack, although I have installed(I think) it I am not able to invoke it when write the code for it. Here's what I got when I installed it. package 'lmsqreg' successfully unpacked and MD5 sums checked And here is what I got with library(lmsqreg): Attaching package: 'lmsqreg' The following object(s) are masked from 'package:base': Version Qs: Has anybody encountered this problem before? How do I resolve this? Thank you. -Y Addo -- View this message in context: http://r.789695.n4.nabble.com/Help-on-object-s-are-masked-from-package-base-tp3357163p3357163.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
