Re: [R] Changing the label name in the plot

[Jim Lemon]

It is good to see someone learning about how the code works, beyond just
getting the answer.

1) The header argument means, "is the first line of the file a header?". In
this case it should be TRUE. the stringsAsFactors argument means "should
character strings be converted to factors" (a combination of strings and
numbers). Unless you really want them, it is better not to convert.
2.1) pch is the Point CHaracter to use in plotting. Number 19 is a filled
circle.
2.2) Yes, I set the value to the range of both sets of values. You could
also do it like this - ylim=range(spdf[,c(2,4)])
2.3) The values of "cluster" in a kmeans object are sequential integers
from 1 to the number of clusters. That means that both k1 and k2 will have
cluster values of 1 and 2. By adding 2 to the cluster values in k2, they
become 3 and 4. Specifying colors by integers uses the values as indices
into the current color palette. The default palette is:
 1 = black
 2 = red
 3 = green
 4 = blue
and so on. If I had not added 2, both k1 and k2 would have the same colors.
3.1) You could have different numbers of points in the two cluster
analyses. Then you would have to add xlim=c(1,45) to the plot command so
that there was room for the second set of observations.
3.2) These values offset the text from the points so that the points
reflect the real values of the data, while the labels are positioned
adjacent to the points.
4.1) 10 and 1 are the X and Y positions of the upper left corner of the
legend in user units.
4.2) The legend explains the relationship of cluster memberships to colors.
pch=19 shows the same points as in the plot.

Jim

On Wed, Jun 12, 2019 at 6:08 PM Subhamitra Patra 
wrote:

> Sir, I have one more request that being a beginner, I would like to learn
> the logic behind your suggested code. Kindly help me to learn also.
>
> *1. "header = TRUE,stringsAsFactors=FALSE)", *here what is the logic
> behind the keeping header true, and strings Factors=FALSE?
>
> 2. "*plot(spdf[,2],col=k1$cluster,pch=19,ylim=c(0,2.1))*
> * points(spdf[,4],col=k2$cluster+2,pch=19*)", hence
> 2.1) what pch
> indicates? why you set pch values as 19 in both plots?
> 2.2) In y
> lim=c(0,2.1)), you have set the ylim values on the basis of the limits of
> the data, right?
> 2.3) In the
> 2nd line, "col=k2$cluster+2", what is the logic behind the adding of +2?
> I think it indicates the adding of 2nd
> figure in the same
> plot, right?
>
> 3. "*text(1:42+0.5,spdf[,2]+0.05,spdf[,1],col=k1$cluster)*
> * text(1:42-0.5,spdf[,4]-0.05,spdf[,3],col=k2$cluster+2)*",  hence,
>
>  3.1) 1:42 means, from 1 to 42 data points, right? So, I think there is
> no need for removing the extra 3 data points in column 2
>(i.e. in DMs
> columns) because hence k2 is being calculated separately. So, I can set
> differently as 1:45 for column 2 right?
>
>  3.2) What is the logic behind the addition, and subtraction of 0.5,
> and 0.05 in the 1st, and 2nd lines respectively?
>
> 4.
> *"legend(10,1,c("cluster 1 DM","cluster 2 DM","cluster 1 EM","cluster 2
> EM"),*
> *  col=1:4,pch=19)", *hence,
> 4.1. legend (10, 1) is for the
> setting of distance of the values in the X-axis, right?
> 4.2. The entire legend
> function is for the setting of the overall plot, right?
> 4.3. What pch=19 indicates in
> the legend function?
>
>
> Like before, kindly help me to learn this coding, Sir.
>
> Thank you very much for your kind, and encouraging support to the
> R-beginners.
>
>
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> 
>  Sender
> notified by
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> 
>  06/12/19,
> 1:33:30 PM
>
> On Wed, Jun 12, 2019 at 1:31 PM Subhamitra Patra <
> subhamitra.pa...@gmail.com> wrote:
>
>> Dear Sir,
>>
>> Thank you very much. The code which you suggested worked like awesome
>> magic which gave the expected result what I really wanted. For this help, I
>> shall be always grateful to you. Last time also, your intelligent help, and
>> encouraging support had solved my problem. I really appreciate your
>> kindness, patience and cooperative hands to the R beginners.
>>
>> About the crowding of the points, it will remain somehow because of less
>> distance between each data point, but the points corresponding to the
>> labels can be clearly accessible in the zoom mode.
>>
>> Thank you very much Sir.
>>
>>
>>
>>
>>
>> [image: Mailtrack]
>> 

Re: [R] Changing the label name in the plot

[Subhamitra Patra]

Dear Sir,

Thank you very much. The code which you suggested worked like awesome magic
which gave the expected result what I really wanted. For this help, I shall
be always grateful to you. Last time also, your intelligent help, and
encouraging support had solved my problem. I really appreciate your
kindness, patience and cooperative hands to the R beginners.

About the crowding of the points, it will remain somehow because of less
distance between each data point, but the points corresponding to the
labels can be clearly accessible in the zoom mode.

Thank you very much Sir.





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1:21:19 PM

On Wed, Jun 12, 2019 at 12:24 PM Jim Lemon  wrote:

> Hi Subhamitra,
> I may have a better understanding. I have made up the second set of top
> level domains as I have no idea what they may be. I hope that this is an
> improvement.
>
> spdf<-read.table(text="States1 DMs States2 EMs
> JP 2.071 YA 2.038
> CH 2.0548 YB 2.017
> AT 2.0544 YC 2.007
> CL 2.047 YD 1.963
> ES 2.033 YE 1.947
> PT 2.0327 YF 1.942
> PL 2.0321 YG 1.932
> FR 2.031 YH 1.924
> SE 2.0293 YI 1.913
> DE 2.0291 YJ 1.906
> DK 2.027 YK 1.892
> UK 2.022 YL 1.877
> TW 1.9934 YM 1.869
> NL 1.993 YN 1.849
> HK 1.989 YO 1.848
> LU 1.988 YP 1.836
> CA 1.987 YQ 1.835
> NZ 1.9849 YR 1.819
> US 1.9842 YS 1.798
> AU 1.981 YT 1.771
> MY 1.978 YU 1.762
> HU 1.968 YV 1.717
> LT 1.96 YW 1.707
> SG 1.958 YX 1.688
> FI 1.955 YZ 1.683
> CR 1.953 ZA 1.671
> BY 1.952 ZB 1.664
> IL 1.95 ZC 1.646
> EE 1.948 ZD 1.633
> NO 1.945 ZE 1.624
> IE 1.937 ZF 1.621
> SI 1.913 ZG 1.584
> LV 1.901 ZH 1.487
> SK 1.871 ZI 1.482
> BH 1.801 ZJ 1.23
> SK 1.761 ZK 1.129
> AE 1.751 ZL 1.168
> IS 1.699 ZM 0.941
> BM 1.687 ZN 0.591
> KW 1.668 ZO 0.387
> CY 1.633 ZP 0.16
> AP 1.56 ZQ 0.0002",
> header = TRUE,stringsAsFactors=FALSE)
> library(cluster)
> k1<-kmeans(spdf[,2],centers=2,nstart=25)
> k2<-kmeans(spdf[,4],centers=2,nstart=25)
> plot(spdf[,2],col=k1$cluster,pch=19,ylim=c(0,2.1))
> points(spdf[,4],col=k2$cluster+2,pch=19)
> text(1:42+0.5,spdf[,2]+0.05,spdf[,1],col=k1$cluster)
> text(1:42-0.5,spdf[,4]-0.05,spdf[,3],col=k2$cluster+2)
> legend(10,1,c("cluster 1 DM","cluster 2 DM","cluster 1 EM","cluster 2 EM"),
>  col=1:4,pch=19)
>
> The crowding of points and labels remains.
>
> Jim
>
> On Wed, Jun 12, 2019 at 2:37 PM Subhamitra Patra <
> subhamitra.pa...@gmail.com> wrote:
>
>> Hello Sir,
>>
>> Thank you very much for your help for which I shall be always grateful to
>> you.
>>
>> Concerning your questions,
>> "*1) Are the states in column 3 the same as those in column 1? As
>> you initially named the data frame "ts", perhaps the values in columns 2
>> and are taken at different times. If not, perhaps they are measured in
>> another set of countries, as yet unknown. Perhaps "DMs" and "EMs" are codes
>> that will resolve this.", *
>> I would like to answer that
>> the states in column 3 are not the same as in column 1. The data points
>> in column 2, and 4 are the values measured for different sets of countries.
>> Thus, they are a different set of values for a different set of countries,
>> and will not require one label for both the points in column 2 and 4 (i.e.
>> data columns). In particular, column 2 consists of the 45 data points that
>> measured for 45 countries (state names in column 1) whereas column 4
>> contains the 42 data points that measured for 42 another set of countries
>> (state name mentioned in column 3).  I tried both the column 2, and 4
>> separately along with their respective name columns, but unable to do
>> because K-mean test clusters only the numeric data points and is not
>> considering any non-numeric columns (i.e. state names). Thus, I considered
>> both the data points simultaneously, and after removing NAs from the data
>> table, both columns consist of the 42 data points. Hence, the number of
>> observations rather than the states name is coming in the clustered plot.
>> In this case, I stuck with the problem of setting a different label
>> (mentioned in column 1, and 3) for the different data points of column 2,
>> and 4.
>>
>> Hope I successfully answered your question.
>>
>> Thank you.
>>
>>
>>
>> [image: Mailtrack]
>> 
>>  Sender
>> notified by
>> Mailtrack
>> 
>>  06/12/19,
>> 9:47:04 AM
>>
>> On Wed, Jun 12, 2019 at 6:04 AM Jim Lemon  wrote:
>>
>>> Hi Subhamitra,
>>> It is time to admit that I had the wrong idea about what you wanted to
>>> do, due to the combination of trying to solve two problems at once
>>> while I was very tired. I appreciate your patience.
>>>
>>> From your last email, you have a data frame with four columns. The
>>> first and third are 

Re: [R] Changing the label name in the plot

[Jim Lemon]

Hi Subhamitra,
I may have a better understanding. I have made up the second set of top
level domains as I have no idea what they may be. I hope that this is an
improvement.

spdf<-read.table(text="States1 DMs States2 EMs
JP 2.071 YA 2.038
CH 2.0548 YB 2.017
AT 2.0544 YC 2.007
CL 2.047 YD 1.963
ES 2.033 YE 1.947
PT 2.0327 YF 1.942
PL 2.0321 YG 1.932
FR 2.031 YH 1.924
SE 2.0293 YI 1.913
DE 2.0291 YJ 1.906
DK 2.027 YK 1.892
UK 2.022 YL 1.877
TW 1.9934 YM 1.869
NL 1.993 YN 1.849
HK 1.989 YO 1.848
LU 1.988 YP 1.836
CA 1.987 YQ 1.835
NZ 1.9849 YR 1.819
US 1.9842 YS 1.798
AU 1.981 YT 1.771
MY 1.978 YU 1.762
HU 1.968 YV 1.717
LT 1.96 YW 1.707
SG 1.958 YX 1.688
FI 1.955 YZ 1.683
CR 1.953 ZA 1.671
BY 1.952 ZB 1.664
IL 1.95 ZC 1.646
EE 1.948 ZD 1.633
NO 1.945 ZE 1.624
IE 1.937 ZF 1.621
SI 1.913 ZG 1.584
LV 1.901 ZH 1.487
SK 1.871 ZI 1.482
BH 1.801 ZJ 1.23
SK 1.761 ZK 1.129
AE 1.751 ZL 1.168
IS 1.699 ZM 0.941
BM 1.687 ZN 0.591
KW 1.668 ZO 0.387
CY 1.633 ZP 0.16
AP 1.56 ZQ 0.0002",
header = TRUE,stringsAsFactors=FALSE)
library(cluster)
k1<-kmeans(spdf[,2],centers=2,nstart=25)
k2<-kmeans(spdf[,4],centers=2,nstart=25)
plot(spdf[,2],col=k1$cluster,pch=19,ylim=c(0,2.1))
points(spdf[,4],col=k2$cluster+2,pch=19)
text(1:42+0.5,spdf[,2]+0.05,spdf[,1],col=k1$cluster)
text(1:42-0.5,spdf[,4]-0.05,spdf[,3],col=k2$cluster+2)
legend(10,1,c("cluster 1 DM","cluster 2 DM","cluster 1 EM","cluster 2 EM"),
 col=1:4,pch=19)

The crowding of points and labels remains.

Jim

On Wed, Jun 12, 2019 at 2:37 PM Subhamitra Patra 
wrote:

> Hello Sir,
>
> Thank you very much for your help for which I shall be always grateful to
> you.
>
> Concerning your questions,
> "*1) Are the states in column 3 the same as those in column 1? As
> you initially named the data frame "ts", perhaps the values in columns 2
> and are taken at different times. If not, perhaps they are measured in
> another set of countries, as yet unknown. Perhaps "DMs" and "EMs" are codes
> that will resolve this.", *
> I would like to answer that
> the states in column 3 are not the same as in column 1. The data points in
> column 2, and 4 are the values measured for different sets of countries.
> Thus, they are a different set of values for a different set of countries,
> and will not require one label for both the points in column 2 and 4 (i.e.
> data columns). In particular, column 2 consists of the 45 data points that
> measured for 45 countries (state names in column 1) whereas column 4
> contains the 42 data points that measured for 42 another set of countries
> (state name mentioned in column 3).  I tried both the column 2, and 4
> separately along with their respective name columns, but unable to do
> because K-mean test clusters only the numeric data points and is not
> considering any non-numeric columns (i.e. state names). Thus, I considered
> both the data points simultaneously, and after removing NAs from the data
> table, both columns consist of the 42 data points. Hence, the number of
> observations rather than the states name is coming in the clustered plot.
> In this case, I stuck with the problem of setting a different label
> (mentioned in column 1, and 3) for the different data points of column 2,
> and 4.
>
> Hope I successfully answered your question.
>
> Thank you.
>
>
>
> [image: Mailtrack]
> 
>  Sender
> notified by
> Mailtrack
> 
>  06/12/19,
> 9:47:04 AM
>
> On Wed, Jun 12, 2019 at 6:04 AM Jim Lemon  wrote:
>
>> Hi Subhamitra,
>> It is time to admit that I had the wrong idea about what you wanted to
>> do, due to the combination of trying to solve two problems at once
>> while I was very tired. I appreciate your patience.
>>
>> From your last email, you have a data frame with four columns. The
>> first and third are cryptic names for political states and the second
>> and fourth are values that I assume are measured in those states.
>> 1) Are the states in column 3 the same as those in column 1? As you
>> initially named the data frame "ts", perhaps the values in columns 2
>> and 4 are taken at different times. If not, perhaps they are measured
>> in another set of countries, as yet unknown. Perhaps "DMs" and "EMs"
>> are codes that will resolve this.
>>
>> I assumed that "DMs" and "EMs" should be used as the X and Y values on
>> a scatterplot, as your initial example seemed to indicate. If so, they
>> are different values for the same country and only require one label
>> for each point. Proceeding from this, you can do something like this:
>>
>> spdf<-read.table(text="State DMs EMs
>> JP 2.071 2.038
>> CH 2.0548 2.017
>> AT 2.0544 2.007
>> CL 2.047 1.963
>> ES 2.033 1.947
>> PT 2.0327 1.942
>> PL 2.0321 1.932
>> FR 2.031 1.924
>> SE 2.0293 1.913
>> DE 2.0291 1.906
>> DK 2.027 1.892
>> UK 2.022 1.877
>> TW 1.9934 1.869
>> NL 1.993 1.849
>> HK 1.989 1.848
>> LU 1.988 1.836
>> CA 1.987 

Re: [R] Changing the label name in the plot

[Subhamitra Patra]

Hello Sir,

Thank you very much for your help for which I shall be always grateful to
you.

Concerning your questions,
"*1) Are the states in column 3 the same as those in column 1? As
you initially named the data frame "ts", perhaps the values in columns 2
and are taken at different times. If not, perhaps they are measured in
another set of countries, as yet unknown. Perhaps "DMs" and "EMs" are codes
that will resolve this.", *
I would like to answer that
the states in column 3 are not the same as in column 1. The data points in
column 2, and 4 are the values measured for different sets of countries.
Thus, they are a different set of values for a different set of countries,
and will not require one label for both the points in column 2 and 4 (i.e.
data columns). In particular, column 2 consists of the 45 data points that
measured for 45 countries (state names in column 1) whereas column 4
contains the 42 data points that measured for 42 another set of countries
(state name mentioned in column 3).  I tried both the column 2, and 4
separately along with their respective name columns, but unable to do
because K-mean test clusters only the numeric data points and is not
considering any non-numeric columns (i.e. state names). Thus, I considered
both the data points simultaneously, and after removing NAs from the data
table, both columns consist of the 42 data points. Hence, the number of
observations rather than the states name is coming in the clustered plot.
In this case, I stuck with the problem of setting a different label
(mentioned in column 1, and 3) for the different data points of column 2,
and 4.

Hope I successfully answered your question.

Thank you.



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notified by
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06/12/19,
9:47:04 AM

On Wed, Jun 12, 2019 at 6:04 AM Jim Lemon  wrote:

> Hi Subhamitra,
> It is time to admit that I had the wrong idea about what you wanted to
> do, due to the combination of trying to solve two problems at once
> while I was very tired. I appreciate your patience.
>
> From your last email, you have a data frame with four columns. The
> first and third are cryptic names for political states and the second
> and fourth are values that I assume are measured in those states.
> 1) Are the states in column 3 the same as those in column 1? As you
> initially named the data frame "ts", perhaps the values in columns 2
> and 4 are taken at different times. If not, perhaps they are measured
> in another set of countries, as yet unknown. Perhaps "DMs" and "EMs"
> are codes that will resolve this.
>
> I assumed that "DMs" and "EMs" should be used as the X and Y values on
> a scatterplot, as your initial example seemed to indicate. If so, they
> are different values for the same country and only require one label
> for each point. Proceeding from this, you can do something like this:
>
> spdf<-read.table(text="State DMs EMs
> JP 2.071 2.038
> CH 2.0548 2.017
> AT 2.0544 2.007
> CL 2.047 1.963
> ES 2.033 1.947
> PT 2.0327 1.942
> PL 2.0321 1.932
> FR 2.031 1.924
> SE 2.0293 1.913
> DE 2.0291 1.906
> DK 2.027 1.892
> UK 2.022 1.877
> TW 1.9934 1.869
> NL 1.993 1.849
> HK 1.989 1.848
> LU 1.988 1.836
> CA 1.987 1.835
> NZ 1.9849 1.819
> US 1.9842 1.798
> AU 1.981 1.771
> MY 1.978 1.762
> HU 1.968 1.717
> LT 1.96 1.707
> SG 1.958 1.688
> FI 1.955 1.683
> CR 1.953 1.671
> BY 1.952 1.664
> IL 1.95 1.646
> EE 1.948 1.633
> NO 1.945 1.624
> IE 1.937 1.621
> SI 1.913 1.584
> LV 1.901 1.487
> SK 1.871 1.482
> BH 1.801 1.23
> SK 1.761 1.129
> AE 1.751 1.168
> IS 1.699 0.941
> BM 1.687 0.591
> KW 1.668 0.387
> CY 1.633 0.16
> AP 1.56 0.0002",
> header = TRUE,stringsAsFactors=FALSE)
> library(cluster)
> k2 <- kmeans(spdf[,c(2,3)], centers = 2, nstart = 25)
> plot(spdf[,c(2,3)],col=k2$cluster,pch=19,xlim=c(1.55,2.1))
> text(spdf[,2]+rep(c(0.02,-0.02),42),
>  spdf[,3]+rep(c(-0.05,0.05),42),spdf[,1],col=k2$cluster)
> segments(spdf[,2],spdf[,3],spdf[,2]+rep(c(0.02,-0.02),42),
>  spdf[,3]+rep(c(-0.05,0.05),42),col=k2$cluster)
>
> I took the liberty of replacing your abbreviations with internet top
> level domains. As I hope you can see, you have a problem with crowded
> points and labels, even with the trick of spreading the labels out.
> You could modify the X and Y offsets by hand and get a much more
> readable plot.
>
> If this is not what you want, a bit more explanation of what you do
> want may get you there.
>
> Jim
>


-- 
*Best Regards,*
*Subhamitra Patra*
*Phd. Research Scholar*
*Department of Humanities and Social Sciences*
*Indian Institute of Technology, Kharagpur*
*INDIA*

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Re: [R] Changing the label name in the plot

[Jim Lemon]

Hi Subhamitra,
It is time to admit that I had the wrong idea about what you wanted to
do, due to the combination of trying to solve two problems at once
while I was very tired. I appreciate your patience.

>From your last email, you have a data frame with four columns. The
first and third are cryptic names for political states and the second
and fourth are values that I assume are measured in those states.
1) Are the states in column 3 the same as those in column 1? As you
initially named the data frame "ts", perhaps the values in columns 2
and 4 are taken at different times. If not, perhaps they are measured
in another set of countries, as yet unknown. Perhaps "DMs" and "EMs"
are codes that will resolve this.

I assumed that "DMs" and "EMs" should be used as the X and Y values on
a scatterplot, as your initial example seemed to indicate. If so, they
are different values for the same country and only require one label
for each point. Proceeding from this, you can do something like this:

spdf<-read.table(text="State DMs EMs
JP 2.071 2.038
CH 2.0548 2.017
AT 2.0544 2.007
CL 2.047 1.963
ES 2.033 1.947
PT 2.0327 1.942
PL 2.0321 1.932
FR 2.031 1.924
SE 2.0293 1.913
DE 2.0291 1.906
DK 2.027 1.892
UK 2.022 1.877
TW 1.9934 1.869
NL 1.993 1.849
HK 1.989 1.848
LU 1.988 1.836
CA 1.987 1.835
NZ 1.9849 1.819
US 1.9842 1.798
AU 1.981 1.771
MY 1.978 1.762
HU 1.968 1.717
LT 1.96 1.707
SG 1.958 1.688
FI 1.955 1.683
CR 1.953 1.671
BY 1.952 1.664
IL 1.95 1.646
EE 1.948 1.633
NO 1.945 1.624
IE 1.937 1.621
SI 1.913 1.584
LV 1.901 1.487
SK 1.871 1.482
BH 1.801 1.23
SK 1.761 1.129
AE 1.751 1.168
IS 1.699 0.941
BM 1.687 0.591
KW 1.668 0.387
CY 1.633 0.16
AP 1.56 0.0002",
header = TRUE,stringsAsFactors=FALSE)
library(cluster)
k2 <- kmeans(spdf[,c(2,3)], centers = 2, nstart = 25)
plot(spdf[,c(2,3)],col=k2$cluster,pch=19,xlim=c(1.55,2.1))
text(spdf[,2]+rep(c(0.02,-0.02),42),
 spdf[,3]+rep(c(-0.05,0.05),42),spdf[,1],col=k2$cluster)
segments(spdf[,2],spdf[,3],spdf[,2]+rep(c(0.02,-0.02),42),
 spdf[,3]+rep(c(-0.05,0.05),42),col=k2$cluster)

I took the liberty of replacing your abbreviations with internet top
level domains. As I hope you can see, you have a problem with crowded
points and labels, even with the trick of spreading the labels out.
You could modify the X and Y offsets by hand and get a much more
readable plot.

If this is not what you want, a bit more explanation of what you do
want may get you there.

Jim

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and provide commented, minimal, self-contained, reproducible code.

Re: [R] Changing the label name in the plot

[Bert Gunter]

OK. Thanks, Petr.

Bert Gunter

"The trouble with having an open mind is that people keep coming along and
sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )


On Tue, Jun 11, 2019 at 7:22 AM PIKAL Petr  wrote:

> Hi Bert
>
> names(ts)
> [1] "Name"   "DMs""Name.1" "EMs"
> >
> R is clever enough not to end with same name.
>
> My error comes from ts not to be all numeric. However OP error is
> different therefore it is something weird with original data.
>
> Cheers.
> Petr
>
> From: Bert Gunter 
> Sent: Tuesday, June 11, 2019 3:15 PM
> To: PIKAL Petr 
> Cc: Subhamitra Patra ; Jim Lemon <
> drjimle...@gmail.com>; r-help mailing list 
> Subject: Re: [R] Changing the label name in the plot
>
> There appear to be two columns with the same name. Surely this will cause
> problems.
>
> Bert Gunter
>
> "The trouble with having an open mind is that people keep coming along and
> sticking things into it."
> -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
>
>
> On Tue, Jun 11, 2019 at 3:19 AM PIKAL Petr <mailto:petr.pi...@precheza.cz>
> wrote:
> Hi
>
> Ts should be numeric matrix if I read the help page correctly. However I
> get different error message
>
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)
> In addition: Warning message:
> In storage.mode(x) <- "double" : NAs introduced by coercion
>
> So there must be another issue with your data.
>
> Cheers
> Petr
>
> -----Original Message-
> From: R-help <mailto:r-help-boun...@r-project.org> On Behalf Of
> Subhamitra Patra
> Sent: Tuesday, June 11, 2019 10:49 AM
> To: Jim Lemon <mailto:drjimle...@gmail.com>; r-help mailing list  r-help@r-project.org>
> Subject: Re: [R] Changing the label name in the plot
>
> Hello Sir,
>
> Thank you very much for your help. I tried your suggestion but got some
> error, which I am pasting below.
>
>
> Error: unexpected symbol in:
> "
>   header"
> > library(cluster)
> Warning message:
> package ‘cluster’ was built under R version 3.5.3
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> Error in as.vector(x, mode) :
>   cannot coerce type 'closure' to vector of type 'any'
> >plot(ts[c(2,4)],col=k2$cluster,type="n")
> Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
> >text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
> Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>
>
> Please help me.
>
> Thank you.
>
> [image: Mailtrack]
> <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> Sender
> notified by
> Mailtrack
> <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> 06/11/19,
> 3:17:19 PM
>
> On Tue, Jun 11, 2019 at 3:00 PM Jim Lemon <mailto:drjimle...@gmail.com>
> wrote:
>
> > Hi Subhamitra,
> > I don't have the factoextra package, but this may give you what you want:
> >
> > ts<-read.table(text="Name DMs Name EMs A 2.071 a 2.038 B 2.0548 b
> > 2.017 C 2.0544 c 2.007 D 2.047 d 1.963 E 2.033 f 1.947 F 2.0327 g
> > 1.942 G 2.0321 h 1.932 H 2.031 i 1.924 I 2.0293 j 1.913 J 2.0291 k
> > 1.906 K 2.027 l 1.892 L 2.022 m 1.877 M 1.9934 n 1.869 N 1.993 o 1.849
> > O 1.989 p 1.848 P 1.988 q 1.836 Q 1.987 r 1.835 R 1.9849 s 1.819 S
> > 1.9842 t 1.798 T 1.981 u 1.771 U 1.978 v 1.762 V 1.968 w 1.717 W 1.96
> > x 1.707 X 1.958 y 1.688 Y 1.955 z 1.683 Z 1.953 aa 1.671 AA 1.952 ab
> > 1.664 AB 1.95 ac 1.646 AC 1.948 ad 1.633 AD 1.945 ae 1.624 AE 1.937 af
> > 1.621 AF 1.913 ag 1.584 AG 1.901 ah 1.487 AH 1.871 ai 1.482 AI 1.801
> > aj 1.23 AJ 1.761 ak 1.129 AK 1.751 al 1.168 AL 1.699 am 0.941 AM 1.687
> > an 0.591 AN 1.668 ao 0.387 AO 1.633 ap 0.16 AP 1.56 aq 0.0002",
> > header=TRUE,stringsAsFactors=FALSE)
> > library(cluster)
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> > plot(ts[c(2,4)],col=k2$cluster,type="n")
> > text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
> >
> > Jim
> >
> > On Tue, Jun 11, 2019 at 2:44 PM Subhamitra Patra
> > <mailto:subhamitra.pa...@gmail.com> wrote:
> > >
> > > Dear R-users,
> > >
> > > I am doing cluster analysis, but when I am plotting the results, the
> no.
> > of
> > > observation is coming as the level. Hence, I have a different level
> > 

Re: [R] Changing the label name in the plot

[Subhamitra Patra]

Hello Sir,

No, two data columns don't have the same names. 1st columns contain the
data from the developed markets, whereas the 2nd columns from the emerging
markets, but I provided the same header name as name, and name.1.

But, whatever clustering method I got from the R bloggers that they are
using the same name column for the multi-data column. So, easily they are
getting plotted along with the clustered values.

But, in my case, 2 data columns have different name columns, so while
plotting, one is suppressing upon others, and thus making the plot unclear.
I tried to do clustering separately for DMs, and EMs, as they have
different name columns. But, somehow it is not working.

Ok, considering your suggestion, I will check by changing the header name
for both data column and will let you know the result.

Thank you.



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06/11/19,
7:52:59 PM

On Tue, Jun 11, 2019 at 7:44 PM Bert Gunter  wrote:

> There appear to be two columns with the same name. Surely this will cause
> problems.
>
> Bert Gunter
>
> "The trouble with having an open mind is that people keep coming along and
> sticking things into it."
> -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
>
>
> On Tue, Jun 11, 2019 at 3:19 AM PIKAL Petr  wrote:
>
>> Hi
>>
>> Ts should be numeric matrix if I read the help page correctly. However I
>> get different error message
>>
>> > k2 <- kmeans(ts, centers = 2, nstart = 25)
>> Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)
>> In addition: Warning message:
>> In storage.mode(x) <- "double" : NAs introduced by coercion
>>
>> So there must be another issue with your data.
>>
>> Cheers
>> Petr
>>
>> -Original Message-
>> From: R-help  On Behalf Of Subhamitra Patra
>> Sent: Tuesday, June 11, 2019 10:49 AM
>> To: Jim Lemon ; r-help mailing list <
>> r-help@r-project.org>
>> Subject: Re: [R] Changing the label name in the plot
>>
>> Hello Sir,
>>
>> Thank you very much for your help. I tried your suggestion but got some
>> error, which I am pasting below.
>>
>>
>> Error: unexpected symbol in:
>> "
>>   header"
>> > library(cluster)
>> Warning message:
>> package ‘cluster’ was built under R version 3.5.3
>> > k2 <- kmeans(ts, centers = 2, nstart = 25)
>> Error in as.vector(x, mode) :
>>   cannot coerce type 'closure' to vector of type 'any'
>> >plot(ts[c(2,4)],col=k2$cluster,type="n")
>> Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>> >text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
>> Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>>
>>
>> Please help me.
>>
>> Thank you.
>>
>> [image: Mailtrack]
>> <
>> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
>> >
>> Sender
>> notified by
>> Mailtrack
>> <
>> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
>> >
>> 06/11/19,
>> 3:17:19 PM
>>
>> On Tue, Jun 11, 2019 at 3:00 PM Jim Lemon  wrote:
>>
>> > Hi Subhamitra,
>> > I don't have the factoextra package, but this may give you what you
>> want:
>> >
>> > ts<-read.table(text="Name DMs Name EMs A 2.071 a 2.038 B 2.0548 b
>> > 2.017 C 2.0544 c 2.007 D 2.047 d 1.963 E 2.033 f 1.947 F 2.0327 g
>> > 1.942 G 2.0321 h 1.932 H 2.031 i 1.924 I 2.0293 j 1.913 J 2.0291 k
>> > 1.906 K 2.027 l 1.892 L 2.022 m 1.877 M 1.9934 n 1.869 N 1.993 o 1.849
>> > O 1.989 p 1.848 P 1.988 q 1.836 Q 1.987 r 1.835 R 1.9849 s 1.819 S
>> > 1.9842 t 1.798 T 1.981 u 1.771 U 1.978 v 1.762 V 1.968 w 1.717 W 1.96
>> > x 1.707 X 1.958 y 1.688 Y 1.955 z 1.683 Z 1.953 aa 1.671 AA 1.952 ab
>> > 1.664 AB 1.95 ac 1.646 AC 1.948 ad 1.633 AD 1.945 ae 1.624 AE 1.937 af
>> > 1.621 AF 1.913 ag 1.584 AG 1.901 ah 1.487 AH 1.871 ai 1.482 AI 1.801
>> > aj 1.23 AJ 1.761 ak 1.129 AK 1.751 al 1.168 AL 1.699 am 0.941 AM 1.687
>> > an 0.591 AN 1.668 ao 0.387 AO 1.633 ap 0.16 AP 1.56 aq 0.0002",
>> > header=TRUE,stringsAsFactors=FALSE)
>> > library(cluster)
>> > k2 <- kmeans(ts, centers = 2, nstart = 25)
>> > plot(ts[c(2,4)],col=k2$cluster,type="n")
>&g

Re: [R] Changing the label name in the plot

[PIKAL Petr]

Hi Bert

names(ts)
[1] "Name"   "DMs""Name.1" "EMs"   
>
R is clever enough not to end with same name.

My error comes from ts not to be all numeric. However OP error is different 
therefore it is something weird with original data.

Cheers.
Petr

From: Bert Gunter  
Sent: Tuesday, June 11, 2019 3:15 PM
To: PIKAL Petr 
Cc: Subhamitra Patra ; Jim Lemon 
; r-help mailing list 
Subject: Re: [R] Changing the label name in the plot

There appear to be two columns with the same name. Surely this will cause 
problems.

Bert Gunter

"The trouble with having an open mind is that people keep coming along and 
sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )


On Tue, Jun 11, 2019 at 3:19 AM PIKAL Petr <mailto:petr.pi...@precheza.cz> 
wrote:
Hi

Ts should be numeric matrix if I read the help page correctly. However I get 
different error message

> k2 <- kmeans(ts, centers = 2, nstart = 25)
Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)
In addition: Warning message:
In storage.mode(x) <- "double" : NAs introduced by coercion

So there must be another issue with your data.

Cheers
Petr

-Original Message-
From: R-help <mailto:r-help-boun...@r-project.org> On Behalf Of Subhamitra Patra
Sent: Tuesday, June 11, 2019 10:49 AM
To: Jim Lemon <mailto:drjimle...@gmail.com>; r-help mailing list 
<mailto:r-help@r-project.org>
Subject: Re: [R] Changing the label name in the plot

Hello Sir,

Thank you very much for your help. I tried your suggestion but got some error, 
which I am pasting below.


Error: unexpected symbol in:
"
              header"
> library(cluster)
Warning message:
package ‘cluster’ was built under R version 3.5.3
> k2 <- kmeans(ts, centers = 2, nstart = 25)
Error in as.vector(x, mode) :
  cannot coerce type 'closure' to vector of type 'any'
>                plot(ts[c(2,4)],col=k2$cluster,type="n")
Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>                text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
Error in ts[c(2, 4)] : object of type 'closure' is not subsettable


Please help me.

Thank you.

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06/11/19,
3:17:19 PM

On Tue, Jun 11, 2019 at 3:00 PM Jim Lemon <mailto:drjimle...@gmail.com> wrote:

> Hi Subhamitra,
> I don't have the factoextra package, but this may give you what you want:
>
> ts<-read.table(text="Name DMs Name EMs A 2.071 a 2.038 B 2.0548 b
> 2.017 C 2.0544 c 2.007 D 2.047 d 1.963 E 2.033 f 1.947 F 2.0327 g
> 1.942 G 2.0321 h 1.932 H 2.031 i 1.924 I 2.0293 j 1.913 J 2.0291 k
> 1.906 K 2.027 l 1.892 L 2.022 m 1.877 M 1.9934 n 1.869 N 1.993 o 1.849
> O 1.989 p 1.848 P 1.988 q 1.836 Q 1.987 r 1.835 R 1.9849 s 1.819 S
> 1.9842 t 1.798 T 1.981 u 1.771 U 1.978 v 1.762 V 1.968 w 1.717 W 1.96
> x 1.707 X 1.958 y 1.688 Y 1.955 z 1.683 Z 1.953 aa 1.671 AA 1.952 ab
> 1.664 AB 1.95 ac 1.646 AC 1.948 ad 1.633 AD 1.945 ae 1.624 AE 1.937 af
> 1.621 AF 1.913 ag 1.584 AG 1.901 ah 1.487 AH 1.871 ai 1.482 AI 1.801
> aj 1.23 AJ 1.761 ak 1.129 AK 1.751 al 1.168 AL 1.699 am 0.941 AM 1.687
> an 0.591 AN 1.668 ao 0.387 AO 1.633 ap 0.16 AP 1.56 aq 0.0002",
> header=TRUE,stringsAsFactors=FALSE)
> library(cluster)
> k2 <- kmeans(ts, centers = 2, nstart = 25)
> plot(ts[c(2,4)],col=k2$cluster,type="n")
> text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
>
> Jim
>
> On Tue, Jun 11, 2019 at 2:44 PM Subhamitra Patra
> <mailto:subhamitra.pa...@gmail.com> wrote:
> >
> > Dear R-users,
> >
> > I am doing cluster analysis, but when I am plotting the results, the no.
> of
> > observation is coming as the level. Hence, I have a different level
> > name for each observation differently for each column. I have 2
> > columns,
> namely
> > DMs, and EMs, which will be clustered, but I am unable to label each
> > dot
> in
> > the cluster as per their different name. In other words, the dots in
> > the cluster are being labeled as per their number of observation
> > which I want to rename as per their different name in the data. But,
> > sometimes in
> code,
> > both the columns indicating the cluster names are not supporting due
> > to their non-numerical texts.
> >
> > Hence, my query is how to rename or change the label of each dot in
> > a cluster. Here is my code.
> >
> > library(tidyverse)
> > library(cluster)
> > library(factoextra)
> > k2 <- kmeans(ts, centers = 2, nstart = 25) fviz_cluster(k2, data =
> 

Re: [R] Changing the label name in the plot

[Bert Gunter]

There appear to be two columns with the same name. Surely this will cause
problems.

Bert Gunter

"The trouble with having an open mind is that people keep coming along and
sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )


On Tue, Jun 11, 2019 at 3:19 AM PIKAL Petr  wrote:

> Hi
>
> Ts should be numeric matrix if I read the help page correctly. However I
> get different error message
>
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)
> In addition: Warning message:
> In storage.mode(x) <- "double" : NAs introduced by coercion
>
> So there must be another issue with your data.
>
> Cheers
> Petr
>
> -Original Message-
> From: R-help  On Behalf Of Subhamitra Patra
> Sent: Tuesday, June 11, 2019 10:49 AM
> To: Jim Lemon ; r-help mailing list <
> r-help@r-project.org>
> Subject: Re: [R] Changing the label name in the plot
>
> Hello Sir,
>
> Thank you very much for your help. I tried your suggestion but got some
> error, which I am pasting below.
>
>
> Error: unexpected symbol in:
> "
>   header"
> > library(cluster)
> Warning message:
> package ‘cluster’ was built under R version 3.5.3
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> Error in as.vector(x, mode) :
>   cannot coerce type 'closure' to vector of type 'any'
> >plot(ts[c(2,4)],col=k2$cluster,type="n")
> Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
> >text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
> Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>
>
> Please help me.
>
> Thank you.
>
> [image: Mailtrack]
> <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> Sender
> notified by
> Mailtrack
> <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> 06/11/19,
> 3:17:19 PM
>
> On Tue, Jun 11, 2019 at 3:00 PM Jim Lemon  wrote:
>
> > Hi Subhamitra,
> > I don't have the factoextra package, but this may give you what you want:
> >
> > ts<-read.table(text="Name DMs Name EMs A 2.071 a 2.038 B 2.0548 b
> > 2.017 C 2.0544 c 2.007 D 2.047 d 1.963 E 2.033 f 1.947 F 2.0327 g
> > 1.942 G 2.0321 h 1.932 H 2.031 i 1.924 I 2.0293 j 1.913 J 2.0291 k
> > 1.906 K 2.027 l 1.892 L 2.022 m 1.877 M 1.9934 n 1.869 N 1.993 o 1.849
> > O 1.989 p 1.848 P 1.988 q 1.836 Q 1.987 r 1.835 R 1.9849 s 1.819 S
> > 1.9842 t 1.798 T 1.981 u 1.771 U 1.978 v 1.762 V 1.968 w 1.717 W 1.96
> > x 1.707 X 1.958 y 1.688 Y 1.955 z 1.683 Z 1.953 aa 1.671 AA 1.952 ab
> > 1.664 AB 1.95 ac 1.646 AC 1.948 ad 1.633 AD 1.945 ae 1.624 AE 1.937 af
> > 1.621 AF 1.913 ag 1.584 AG 1.901 ah 1.487 AH 1.871 ai 1.482 AI 1.801
> > aj 1.23 AJ 1.761 ak 1.129 AK 1.751 al 1.168 AL 1.699 am 0.941 AM 1.687
> > an 0.591 AN 1.668 ao 0.387 AO 1.633 ap 0.16 AP 1.56 aq 0.0002",
> > header=TRUE,stringsAsFactors=FALSE)
> > library(cluster)
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> > plot(ts[c(2,4)],col=k2$cluster,type="n")
> > text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
> >
> > Jim
> >
> > On Tue, Jun 11, 2019 at 2:44 PM Subhamitra Patra
> >  wrote:
> > >
> > > Dear R-users,
> > >
> > > I am doing cluster analysis, but when I am plotting the results, the
> no.
> > of
> > > observation is coming as the level. Hence, I have a different level
> > > name for each observation differently for each column. I have 2
> > > columns,
> > namely
> > > DMs, and EMs, which will be clustered, but I am unable to label each
> > > dot
> > in
> > > the cluster as per their different name. In other words, the dots in
> > > the cluster are being labeled as per their number of observation
> > > which I want to rename as per their different name in the data. But,
> > > sometimes in
> > code,
> > > both the columns indicating the cluster names are not supporting due
> > > to their non-numerical texts.
> > >
> > > Hence, my query is how to rename or change the label of each dot in
> > > a cluster. Here is my code.
> > >
> > > library(tidyverse)
> > > library(cluster)
> > > library(factoextra)
> > > k2 <- kmeans(ts, centers = 2, nstart = 25) fviz_cluster(k2, data =
> > > ts)
> > >
> > > Here, I have 2 columns i.e. DMs, and EMs with their different label

Re: [R] Changing the label name in the plot

[PIKAL Petr]

Hi

Ts should be numeric matrix if I read the help page correctly. However I get 
different error message

> k2 <- kmeans(ts, centers = 2, nstart = 25)
Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)
In addition: Warning message:
In storage.mode(x) <- "double" : NAs introduced by coercion

So there must be another issue with your data.

Cheers
Petr

-Original Message-
From: R-help  On Behalf Of Subhamitra Patra
Sent: Tuesday, June 11, 2019 10:49 AM
To: Jim Lemon ; r-help mailing list 
Subject: Re: [R] Changing the label name in the plot

Hello Sir,

Thank you very much for your help. I tried your suggestion but got some error, 
which I am pasting below.


Error: unexpected symbol in:
"
  header"
> library(cluster)
Warning message:
package ‘cluster’ was built under R version 3.5.3
> k2 <- kmeans(ts, centers = 2, nstart = 25)
Error in as.vector(x, mode) :
  cannot coerce type 'closure' to vector of type 'any'
>plot(ts[c(2,4)],col=k2$cluster,type="n")
Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
Error in ts[c(2, 4)] : object of type 'closure' is not subsettable


Please help me.

Thank you.

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06/11/19,
3:17:19 PM

On Tue, Jun 11, 2019 at 3:00 PM Jim Lemon  wrote:

> Hi Subhamitra,
> I don't have the factoextra package, but this may give you what you want:
>
> ts<-read.table(text="Name DMs Name EMs A 2.071 a 2.038 B 2.0548 b
> 2.017 C 2.0544 c 2.007 D 2.047 d 1.963 E 2.033 f 1.947 F 2.0327 g
> 1.942 G 2.0321 h 1.932 H 2.031 i 1.924 I 2.0293 j 1.913 J 2.0291 k
> 1.906 K 2.027 l 1.892 L 2.022 m 1.877 M 1.9934 n 1.869 N 1.993 o 1.849
> O 1.989 p 1.848 P 1.988 q 1.836 Q 1.987 r 1.835 R 1.9849 s 1.819 S
> 1.9842 t 1.798 T 1.981 u 1.771 U 1.978 v 1.762 V 1.968 w 1.717 W 1.96
> x 1.707 X 1.958 y 1.688 Y 1.955 z 1.683 Z 1.953 aa 1.671 AA 1.952 ab
> 1.664 AB 1.95 ac 1.646 AC 1.948 ad 1.633 AD 1.945 ae 1.624 AE 1.937 af
> 1.621 AF 1.913 ag 1.584 AG 1.901 ah 1.487 AH 1.871 ai 1.482 AI 1.801
> aj 1.23 AJ 1.761 ak 1.129 AK 1.751 al 1.168 AL 1.699 am 0.941 AM 1.687
> an 0.591 AN 1.668 ao 0.387 AO 1.633 ap 0.16 AP 1.56 aq 0.0002",
> header=TRUE,stringsAsFactors=FALSE)
> library(cluster)
> k2 <- kmeans(ts, centers = 2, nstart = 25)
> plot(ts[c(2,4)],col=k2$cluster,type="n")
> text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
>
> Jim
>
> On Tue, Jun 11, 2019 at 2:44 PM Subhamitra Patra
>  wrote:
> >
> > Dear R-users,
> >
> > I am doing cluster analysis, but when I am plotting the results, the no.
> of
> > observation is coming as the level. Hence, I have a different level
> > name for each observation differently for each column. I have 2
> > columns,
> namely
> > DMs, and EMs, which will be clustered, but I am unable to label each
> > dot
> in
> > the cluster as per their different name. In other words, the dots in
> > the cluster are being labeled as per their number of observation
> > which I want to rename as per their different name in the data. But,
> > sometimes in
> code,
> > both the columns indicating the cluster names are not supporting due
> > to their non-numerical texts.
> >
> > Hence, my query is how to rename or change the label of each dot in
> > a cluster. Here is my code.
> >
> > library(tidyverse)
> > library(cluster)
> > library(factoextra)
> > k2 <- kmeans(ts, centers = 2, nstart = 25) fviz_cluster(k2, data =
> > ts)
> >
> > Here, I have 2 columns i.e. DMs, and EMs with their different label
> > name (i.e. the different name for different observation differently
> > for 2 columns), and want to plot such label name in the cluster
> > graph rather
> than
> > the no. of observation.
> >
> > For your convenience, I am attaching my data.
> >
> > Please find the attached data, and kindly help me in this regard.
> >
> > Thank you.
> >
> >
> >
> > --
> > *Best Regards,*
> > *Subhamitra Patra*
> > *Phd. Research Scholar*
> > *Department of Humanities and Social Sciences* *Indian Institute of
> > Technology, Kharagpur*
> > *INDIA*
> >
> > [image: Mailtrack]
> > <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaig
> n=signaturevirality5&
> >
> > Sender
> > notified by
> > Mailtrack
> > <
> https://mailtrack.io?utm_source=gmail_medium=sign

Re: [R] Changing the label name in the plot

[Subhamitra Patra]

Hello Sir,

Thank you very much for your help. I tried your suggestion but got some
error, which I am pasting below.


Error: unexpected symbol in:
"
  header"
> library(cluster)
Warning message:
package ‘cluster’ was built under R version 3.5.3
> k2 <- kmeans(ts, centers = 2, nstart = 25)
Error in as.vector(x, mode) :
  cannot coerce type 'closure' to vector of type 'any'
>plot(ts[c(2,4)],col=k2$cluster,type="n")
Error in ts[c(2, 4)] : object of type 'closure' is not subsettable
>text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
Error in ts[c(2, 4)] : object of type 'closure' is not subsettable


Please help me.

Thank you.

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06/11/19,
3:17:19 PM

On Tue, Jun 11, 2019 at 3:00 PM Jim Lemon  wrote:

> Hi Subhamitra,
> I don't have the factoextra package, but this may give you what you want:
>
> ts<-read.table(text="Name DMs Name EMs
> A 2.071 a 2.038
> B 2.0548 b 2.017
> C 2.0544 c 2.007
> D 2.047 d 1.963
> E 2.033 f 1.947
> F 2.0327 g 1.942
> G 2.0321 h 1.932
> H 2.031 i 1.924
> I 2.0293 j 1.913
> J 2.0291 k 1.906
> K 2.027 l 1.892
> L 2.022 m 1.877
> M 1.9934 n 1.869
> N 1.993 o 1.849
> O 1.989 p 1.848
> P 1.988 q 1.836
> Q 1.987 r 1.835
> R 1.9849 s 1.819
> S 1.9842 t 1.798
> T 1.981 u 1.771
> U 1.978 v 1.762
> V 1.968 w 1.717
> W 1.96 x 1.707
> X 1.958 y 1.688
> Y 1.955 z 1.683
> Z 1.953 aa 1.671
> AA 1.952 ab 1.664
> AB 1.95 ac 1.646
> AC 1.948 ad 1.633
> AD 1.945 ae 1.624
> AE 1.937 af 1.621
> AF 1.913 ag 1.584
> AG 1.901 ah 1.487
> AH 1.871 ai 1.482
> AI 1.801 aj 1.23
> AJ 1.761 ak 1.129
> AK 1.751 al 1.168
> AL 1.699 am 0.941
> AM 1.687 an 0.591
> AN 1.668 ao 0.387
> AO 1.633 ap 0.16
> AP 1.56 aq 0.0002",
> header=TRUE,stringsAsFactors=FALSE)
> library(cluster)
> k2 <- kmeans(ts, centers = 2, nstart = 25)
> plot(ts[c(2,4)],col=k2$cluster,type="n")
> text(ts[c(2,4)],ts$Name.1,col=k2$cluster)
>
> Jim
>
> On Tue, Jun 11, 2019 at 2:44 PM Subhamitra Patra
>  wrote:
> >
> > Dear R-users,
> >
> > I am doing cluster analysis, but when I am plotting the results, the no.
> of
> > observation is coming as the level. Hence, I have a different level name
> > for each observation differently for each column. I have 2 columns,
> namely
> > DMs, and EMs, which will be clustered, but I am unable to label each dot
> in
> > the cluster as per their different name. In other words, the dots in the
> > cluster are being labeled as per their number of observation which I want
> > to rename as per their different name in the data. But, sometimes in
> code,
> > both the columns indicating the cluster names are not supporting due to
> > their non-numerical texts.
> >
> > Hence, my query is how to rename or change the label of each dot in a
> > cluster. Here is my code.
> >
> > library(tidyverse)
> > library(cluster)
> > library(factoextra)
> > k2 <- kmeans(ts, centers = 2, nstart = 25)
> > fviz_cluster(k2, data = ts)
> >
> > Here, I have 2 columns i.e. DMs, and EMs with their different label name
> > (i.e. the different name for different observation differently for 2
> > columns), and want to plot such label name in the cluster graph rather
> than
> > the no. of observation.
> >
> > For your convenience, I am attaching my data.
> >
> > Please find the attached data, and kindly help me in this regard.
> >
> > Thank you.
> >
> >
> >
> > --
> > *Best Regards,*
> > *Subhamitra Patra*
> > *Phd. Research Scholar*
> > *Department of Humanities and Social Sciences*
> > *Indian Institute of Technology, Kharagpur*
> > *INDIA*
> >
> > [image: Mailtrack]
> > <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> > Sender
> > notified by
> > Mailtrack
> > <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> > 06/11/19,
> > 9:54:45 AM
> > __
> > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
>


-- 
*Best Regards,*
*Subhamitra Patra*
*Phd. Research Scholar*
*Department of Humanities and Social Sciences*
*Indian Institute of Technology, Kharagpur*
*INDIA*

[[alternative HTML version deleted]]

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Re: [R] Changing the label name in the plot

[Jim Lemon]

Hi Subhamitra,
I don't have the factoextra package, but this may give you what you want:

ts<-read.table(text="Name DMs Name EMs
A 2.071 a 2.038
B 2.0548 b 2.017
C 2.0544 c 2.007
D 2.047 d 1.963
E 2.033 f 1.947
F 2.0327 g 1.942
G 2.0321 h 1.932
H 2.031 i 1.924
I 2.0293 j 1.913
J 2.0291 k 1.906
K 2.027 l 1.892
L 2.022 m 1.877
M 1.9934 n 1.869
N 1.993 o 1.849
O 1.989 p 1.848
P 1.988 q 1.836
Q 1.987 r 1.835
R 1.9849 s 1.819
S 1.9842 t 1.798
T 1.981 u 1.771
U 1.978 v 1.762
V 1.968 w 1.717
W 1.96 x 1.707
X 1.958 y 1.688
Y 1.955 z 1.683
Z 1.953 aa 1.671
AA 1.952 ab 1.664
AB 1.95 ac 1.646
AC 1.948 ad 1.633
AD 1.945 ae 1.624
AE 1.937 af 1.621
AF 1.913 ag 1.584
AG 1.901 ah 1.487
AH 1.871 ai 1.482
AI 1.801 aj 1.23
AJ 1.761 ak 1.129
AK 1.751 al 1.168
AL 1.699 am 0.941
AM 1.687 an 0.591
AN 1.668 ao 0.387
AO 1.633 ap 0.16
AP 1.56 aq 0.0002",
header=TRUE,stringsAsFactors=FALSE)
library(cluster)
k2 <- kmeans(ts, centers = 2, nstart = 25)
plot(ts[c(2,4)],col=k2$cluster,type="n")
text(ts[c(2,4)],ts$Name.1,col=k2$cluster)

Jim

On Tue, Jun 11, 2019 at 2:44 PM Subhamitra Patra
 wrote:
>
> Dear R-users,
>
> I am doing cluster analysis, but when I am plotting the results, the no. of
> observation is coming as the level. Hence, I have a different level name
> for each observation differently for each column. I have 2 columns, namely
> DMs, and EMs, which will be clustered, but I am unable to label each dot in
> the cluster as per their different name. In other words, the dots in the
> cluster are being labeled as per their number of observation which I want
> to rename as per their different name in the data. But, sometimes in code,
> both the columns indicating the cluster names are not supporting due to
> their non-numerical texts.
>
> Hence, my query is how to rename or change the label of each dot in a
> cluster. Here is my code.
>
> library(tidyverse)
> library(cluster)
> library(factoextra)
> k2 <- kmeans(ts, centers = 2, nstart = 25)
> fviz_cluster(k2, data = ts)
>
> Here, I have 2 columns i.e. DMs, and EMs with their different label name
> (i.e. the different name for different observation differently for 2
> columns), and want to plot such label name in the cluster graph rather than
> the no. of observation.
>
> For your convenience, I am attaching my data.
>
> Please find the attached data, and kindly help me in this regard.
>
> Thank you.
>
>
>
> --
> *Best Regards,*
> *Subhamitra Patra*
> *Phd. Research Scholar*
> *Department of Humanities and Social Sciences*
> *Indian Institute of Technology, Kharagpur*
> *INDIA*
>
> [image: Mailtrack]
> 
> Sender
> notified by
> Mailtrack
> 
> 06/11/19,
> 9:54:45 AM
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

__
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] Changing the label name in the plot

[Subhamitra Patra]

Ok Sir. I am sorry that I was not knowing this thing.

So, now I am pasting my data below.

Name DMs Name EMs
A 2.071 a 2.038
B 2.0548 b 2.017
C 2.0544 c 2.007
D 2.047 d 1.963
E 2.033 f 1.947
F 2.0327 g 1.942
G 2.0321 h 1.932
H 2.031 i 1.924
I 2.0293 j 1.913
J 2.0291 k 1.906
K 2.027 l 1.892
L 2.022 m 1.877
M 1.9934 n 1.869
N 1.993 o 1.849
O 1.989 p 1.848
P 1.988 q 1.836
Q 1.987 r 1.835
R 1.9849 s 1.819
S 1.9842 t 1.798
T 1.981 u 1.771
U 1.978 v 1.762
V 1.968 w 1.717
W 1.96 x 1.707
X 1.958 y 1.688
Y 1.955 z 1.683
Z 1.953 aa 1.671
AA 1.952 ab 1.664
AB 1.95 ac 1.646
AC 1.948 ad 1.633
AD 1.945 ae 1.624
AE 1.937 af 1.621
AF 1.913 ag 1.584
AG 1.901 ah 1.487
AH 1.871 ai 1.482
AI 1.801 aj 1.23
AJ 1.761 ak 1.129
AK 1.751 al 1.168
AL 1.699 am 0.941
AM 1.687 an 0.591
AN 1.668 ao 0.387
AO 1.633 ap 0.16
AP 1.56 aq 0.0002

Here, I have clustered the values of DMs, and EMs, and plotted by using the
code mentioned in my previous email, but in plot, the dots in the cluster
are represented with the number of observation which I want to rename with
the corresponding names of the 2 data columns (DMs, and EMs).

Please help me in this regard.

Thanks.


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06/11/19,
1:22:47 PM

On Tue, Jun 11, 2019 at 1:05 PM PIKAL Petr  wrote:

> Attachments are not alowed (mostly) on this list.
>
> Use ?dput to show your data or at least part of your data illustrating the
> problém.
>
> Cheers
> Petr
>
> -Original Message-
> From: R-help  On Behalf Of Subhamitra Patra
> Sent: Tuesday, June 11, 2019 8:05 AM
> To: ঋষি ( ऋषि / rIsHi ) 
> Cc: r-help mailing list 
> Subject: Re: [R] Changing the label name in the plot
>
> Please find the attached data.
>
> [image: Mailtrack]
> <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> Sender
> notified by
> Mailtrack
> <
> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
> >
> 06/11/19,
> 12:32:48 PM
>
> On Tue, Jun 11, 2019 at 12:09 PM ঋষি ( ऋषि / rIsHi ) <
> rishi.das...@gmail.com>
> wrote:
>
> > I can not see the attached data
> >
> > On Tue, 11 Jun 2019, 10:14 Subhamitra Patra,
> > 
> > wrote:
> >
> >> Dear R-users,
> >>
> >> I am doing cluster analysis, but when I am plotting the results, the no.
> >> of
> >> observation is coming as the level. Hence, I have a different level
> >> name for each observation differently for each column. I have 2
> >> columns, namely DMs, and EMs, which will be clustered, but I am
> >> unable to label each dot in the cluster as per their different name.
> >> In other words, the dots in the cluster are being labeled as per
> >> their number of observation which I want to rename as per their
> >> different name in the data. But, sometimes in code, both the columns
> >> indicating the cluster names are not supporting due to their
> >> non-numerical texts.
> >>
> >> Hence, my query is how to rename or change the label of each dot in a
> >> cluster. Here is my code.
> >>
> >> library(tidyverse)
> >> library(cluster)
> >> library(factoextra)
> >> k2 <- kmeans(ts, centers = 2, nstart = 25) fviz_cluster(k2, data =
> >> ts)
> >>
> >> Here, I have 2 columns i.e. DMs, and EMs with their different label
> >> name (i.e. the different name for different observation differently
> >> for 2 columns), and want to plot such label name in the cluster graph
> >> rather than the no. of observation.
> >>
> >> For your convenience, I am attaching my data.
> >>
> >> Please find the attached data, and kindly help me in this regard.
> >>
> >> Thank you.
> >>
> >>
> >>
> >> --
> >> *Best Regards,*
> >> *Subhamitra Patra*
> >> *Phd. Research Scholar*
> >> *Department of Humanities and Social Sciences* *Indian Institute of
> >> Technology, Kharagpur*
> >> *INDIA*
> >>
> >> [image: Mailtrack]
> >> <
> >> https://mailtrack.io?utm_source=gmail_medium=signature_campai
> >> gn=signaturevirality5&
> >> >
> >> Sender
> >> notified by
> >> Mailtrack
> >> <
> >> https://mailtrack.io?utm_source=gmail_medium=signature_campai
> >> gn=signaturevirality5&
> >> >
> >> 06/11/19,
> >> 9:54:45 AM
> >> 

Re: [R] Changing the label name in the plot

[PIKAL Petr]

Attachments are not alowed (mostly) on this list.

Use ?dput to show your data or at least part of your data illustrating the 
problém.

Cheers
Petr

-Original Message-
From: R-help  On Behalf Of Subhamitra Patra
Sent: Tuesday, June 11, 2019 8:05 AM
To: ঋষি ( ऋषि / rIsHi ) 
Cc: r-help mailing list 
Subject: Re: [R] Changing the label name in the plot

Please find the attached data.

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06/11/19,
12:32:48 PM

On Tue, Jun 11, 2019 at 12:09 PM ঋষি ( ऋषि / rIsHi ) 
wrote:

> I can not see the attached data
>
> On Tue, 11 Jun 2019, 10:14 Subhamitra Patra,
> 
> wrote:
>
>> Dear R-users,
>>
>> I am doing cluster analysis, but when I am plotting the results, the no.
>> of
>> observation is coming as the level. Hence, I have a different level
>> name for each observation differently for each column. I have 2
>> columns, namely DMs, and EMs, which will be clustered, but I am
>> unable to label each dot in the cluster as per their different name.
>> In other words, the dots in the cluster are being labeled as per
>> their number of observation which I want to rename as per their
>> different name in the data. But, sometimes in code, both the columns
>> indicating the cluster names are not supporting due to their
>> non-numerical texts.
>>
>> Hence, my query is how to rename or change the label of each dot in a
>> cluster. Here is my code.
>>
>> library(tidyverse)
>> library(cluster)
>> library(factoextra)
>> k2 <- kmeans(ts, centers = 2, nstart = 25) fviz_cluster(k2, data =
>> ts)
>>
>> Here, I have 2 columns i.e. DMs, and EMs with their different label
>> name (i.e. the different name for different observation differently
>> for 2 columns), and want to plot such label name in the cluster graph
>> rather than the no. of observation.
>>
>> For your convenience, I am attaching my data.
>>
>> Please find the attached data, and kindly help me in this regard.
>>
>> Thank you.
>>
>>
>>
>> --
>> *Best Regards,*
>> *Subhamitra Patra*
>> *Phd. Research Scholar*
>> *Department of Humanities and Social Sciences* *Indian Institute of
>> Technology, Kharagpur*
>> *INDIA*
>>
>> [image: Mailtrack]
>> <
>> https://mailtrack.io?utm_source=gmail_medium=signature_campai
>> gn=signaturevirality5&
>> >
>> Sender
>> notified by
>> Mailtrack
>> <
>> https://mailtrack.io?utm_source=gmail_medium=signature_campai
>> gn=signaturevirality5&
>> >
>> 06/11/19,
>> 9:54:45 AM
>> __
>> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
>

--
*Best Regards,*
*Subhamitra Patra*
*Phd. Research Scholar*
*Department of Humanities and Social Sciences* *Indian Institute of Technology, 
Kharagpur*
*INDIA*
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Re: [R] Changing the label name in the plot

[Subhamitra Patra]

Please find the attached data.

[image: Mailtrack]

Sender
notified by
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06/11/19,
12:32:48 PM

On Tue, Jun 11, 2019 at 12:09 PM ঋষি ( ऋषि / rIsHi ) 
wrote:

> I can not see the attached data
>
> On Tue, 11 Jun 2019, 10:14 Subhamitra Patra, 
> wrote:
>
>> Dear R-users,
>>
>> I am doing cluster analysis, but when I am plotting the results, the no.
>> of
>> observation is coming as the level. Hence, I have a different level name
>> for each observation differently for each column. I have 2 columns, namely
>> DMs, and EMs, which will be clustered, but I am unable to label each dot
>> in
>> the cluster as per their different name. In other words, the dots in the
>> cluster are being labeled as per their number of observation which I want
>> to rename as per their different name in the data. But, sometimes in code,
>> both the columns indicating the cluster names are not supporting due to
>> their non-numerical texts.
>>
>> Hence, my query is how to rename or change the label of each dot in a
>> cluster. Here is my code.
>>
>> library(tidyverse)
>> library(cluster)
>> library(factoextra)
>> k2 <- kmeans(ts, centers = 2, nstart = 25)
>> fviz_cluster(k2, data = ts)
>>
>> Here, I have 2 columns i.e. DMs, and EMs with their different label name
>> (i.e. the different name for different observation differently for 2
>> columns), and want to plot such label name in the cluster graph rather
>> than
>> the no. of observation.
>>
>> For your convenience, I am attaching my data.
>>
>> Please find the attached data, and kindly help me in this regard.
>>
>> Thank you.
>>
>>
>>
>> --
>> *Best Regards,*
>> *Subhamitra Patra*
>> *Phd. Research Scholar*
>> *Department of Humanities and Social Sciences*
>> *Indian Institute of Technology, Kharagpur*
>> *INDIA*
>>
>> [image: Mailtrack]
>> <
>> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
>> >
>> Sender
>> notified by
>> Mailtrack
>> <
>> https://mailtrack.io?utm_source=gmail_medium=signature_campaign=signaturevirality5;
>> >
>> 06/11/19,
>> 9:54:45 AM
>> __
>> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
>

-- 
*Best Regards,*
*Subhamitra Patra*
*Phd. Research Scholar*
*Department of Humanities and Social Sciences*
*Indian Institute of Technology, Kharagpur*
*INDIA*
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

[R] Changing the label name in the plot

[Subhamitra Patra]

Dear R-users,

I am doing cluster analysis, but when I am plotting the results, the no. of
observation is coming as the level. Hence, I have a different level name
for each observation differently for each column. I have 2 columns, namely
DMs, and EMs, which will be clustered, but I am unable to label each dot in
the cluster as per their different name. In other words, the dots in the
cluster are being labeled as per their number of observation which I want
to rename as per their different name in the data. But, sometimes in code,
both the columns indicating the cluster names are not supporting due to
their non-numerical texts.

Hence, my query is how to rename or change the label of each dot in a
cluster. Here is my code.

library(tidyverse)
library(cluster)
library(factoextra)
k2 <- kmeans(ts, centers = 2, nstart = 25)
fviz_cluster(k2, data = ts)

Here, I have 2 columns i.e. DMs, and EMs with their different label name
(i.e. the different name for different observation differently for 2
columns), and want to plot such label name in the cluster graph rather than
the no. of observation.

For your convenience, I am attaching my data.

Please find the attached data, and kindly help me in this regard.

Thank you.



-- 
*Best Regards,*
*Subhamitra Patra*
*Phd. Research Scholar*
*Department of Humanities and Social Sciences*
*Indian Institute of Technology, Kharagpur*
*INDIA*

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