Re: [R] Conduct Network Analysis
I don’t know anything about network analysis, but I really guess that more information is needed to give an answer. Cheers, Rainer > On 14 Jul 2017, at 05:08, SEB140004 Studentwrote: > > Greeting. > > Dear Mr/Mrs/Miss, > > I want to create a network by using R but I only have a table that contain > OTU ID and the abundance value of two samples ONLY. > > Isn't possible? If can, which package can be used? > Greatly appreciated to any suggestions and helps. > > Thank you. > > Best regards, > Kang Chin Yi > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Conduct Network Analysis
Have a look at the functions available in the igraph package. B. > On Jul 13, 2017, at 11:08 PM, SEB140004 Student> wrote: > > Greeting. > > Dear Mr/Mrs/Miss, > > I want to create a network by using R but I only have a table that contain > OTU ID and the abundance value of two samples ONLY. > > Isn't possible? If can, which package can be used? > Greatly appreciated to any suggestions and helps. > > Thank you. > > Best regards, > Kang Chin Yi > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Conduct Network Analysis
I don’t know anything about network analysis, but I really guess that more information is needed to give an answer. Cheers, Rainer > On 14 Jul 2017, at 05:08, SEB140004 Studentwrote: > > Greeting. > > Dear Mr/Mrs/Miss, > > I want to create a network by using R but I only have a table that contain > OTU ID and the abundance value of two samples ONLY. > > Isn't possible? If can, which package can be used? > Greatly appreciated to any suggestions and helps. > > Thank you. > > Best regards, > Kang Chin Yi > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) University of Zürich Cell: +41 (0)78 630 66 57 Fax (D):+49 - (0)3 21 21 25 22 44 email: rai...@krugs.de Skype: RMkrug signature.asc Description: Message signed with OpenPGP __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Conduct Network Analysis
Greeting. Dear Mr/Mrs/Miss, I want to create a network by using R but I only have a table that contain OTU ID and the abundance value of two samples ONLY. Isn't possible? If can, which package can be used? Greatly appreciated to any suggestions and helps. Thank you. Best regards, Kang Chin Yi [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.