On Tue, 17 Feb 2009, Nathan S. Watson-Haigh wrote:
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I'm trying to add some Fortran 90 code to an existing package.
When I compile and load the file manually like:
SHELL R CMD SHLIB file.f90
R dyn.load(file.so)
I can use the .Fortran() fine. However, when I try to build, install and load
the library I seem to be missing something.
I do a:
SHELL R CMD build dir
SHELL R CMD INSTALL pkg_version.tar.gz
Things seem to progress smoothly. However, in R when I try to load the package I
get an error like:
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library
'/cs/home/cslsi/wat410/R/ia64-unknown-linux-gnu-library/2.7/pkg/libs/pkg.so':
/cs/home/cslsi/wat410/R/ia64-unknown-linux-gnu-library/2.7/pkg/libs/pkg.so:
undefined symbol: _ZTVN10__cxxabiv117__class_type_infoE
Error: package/namespace load failed for 'pkg'
Can anyone suggest what I might do to solve this?
See the posting guide! This is a question about compiled code, hence
for the R-devel list.
You are apparently using an obsolete R, and it rather looks as if you
are using C++ with Fortran 90, something that is not supported (since
in general it does not work, and you need to tell us the compilers you
are using).
So please post a much more complete description on R-devel, and
perhaps make the failing package available for potential helpers to
look at.
Cheers,
Nathan
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Dr. Nathan S. Watson-Haigh
OCE Post Doctoral Fellow
CSIRO Livestock Industries
Queensland Bioscience Precinct
St Lucia, QLD 4067
Australia
Tel: +61 (0)7 3214 2922
Fax: +61 (0)7 3214 2900
Web: http://www.csiro.au/people/Nathan.Watson-Haigh.html
--
Brian D. Ripley, rip...@stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax: +44 1865 272595
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