What is initialCuratedDF? I'm not seeing it in any standard location
so there's no way to debug it...
Also see inline.
Michael
On Tue, Feb 28, 2012 at 2:41 PM, Ben Ganzfried ben.ganzfr...@gmail.com wrote:
Hey,
I just googled my error and many things came up. I followed the leads and
read the ?read.delim page; I tried changing header = TRUE, and row.names =
TRUE-- but I've still been having trouble fixing it, so I would greatly
appreciate any help you can provide. Here is my code:
PLEASE don't ever do this -- it's potentially very destructive to
anyone who tries to copy your script to help you.
David also mentioned this when you posted the same code ~ 6 months ago.
## rm(list=ls()) ## ALWAYS WRAP IN COMMENTS IF YOU ARE GOING TO INSIST ON
INCLUDING IT
source(../../functions.R)
uncurated - read.csv(../uncurated/GSE3141_full_pdata.csv, as.is
=TRUE,row.names=1)
celfile.dir - ../../../DATA/GSE3141/RAW
##initial creation of curated dataframe
curated - initialCuratedDF(rownames(uncurated),
template.filename=template.csv)
The error occurs when I run this line:
curated - initialCuratedDF(rownames(uncurated),
template.filename=template.csv)
Error in read.table(file = file, header = header, sep = sep, quote = quote,
:
more columns than column name
I would greatly appreciate any help.
Thanks!
Ben
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