Re: [R] ROCR package not installing
try: install.packages(ROCR,dep=T) M.O On to., 2012-11-22 at 16:02 +1000, Philip Robinson wrote: I have tried installing the package (ROCR) with this command: Install.packages(ROCR) And with this command on the command line R CMD INSTALL ROCR_1.0-4.tar.gz But both times I get exactly the same error shown below, I don't understand what is wrong, is this an error in the package code? Thank you Philip probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL ROCR_1.0-4.tar.gz * installing to library '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10' * installing *source* package 'ROCR' ... ** R ** data ** demo ** preparing package for lazy loading Loading required package: gtools Loading required package: gdata gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attaching package: 'gdata' The following object(s) are masked from package:utils : object.size Loading required package: caTools Loading required package: bitops Loading required package: grid Loading required package: KernSmooth KernSmooth 2.23 loaded Copyright M. P. Wand 1997-2009 Attaching package: 'gplots' The following object(s) are masked from package:stats : lowess Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package 'ROCR' * removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR' probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] ROCR package not installing
My version is: Linux bioinform08 2.6.32-33-generic #70-Ubuntu SMP Thu Jul 7 21:13:52 UTC 2011 x86_64 GNU/Linux Ubuntu 10.04.3 LTS R version 2.10.1 (2009-12-14) Philip -Original Message- From: Pascal Oettli [mailto:kri...@ymail.com] Sent: Thursday, 22 November 2012 4:20 PM To: Philip Robinson Cc: r-help@r-project.org Subject: Re: [R] ROCR package not installing Hello, What is the version of R you use ? Regards, Pascal Le 22/11/2012 15:02, Philip Robinson a écrit : I have tried installing the package (ROCR) with this command: Install.packages(ROCR) And with this command on the command line R CMD INSTALL ROCR_1.0-4.tar.gz But both times I get exactly the same error shown below, I don't understand what is wrong, is this an error in the package code? Thank you Philip probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL ROCR_1.0-4.tar.gz * installing to library '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10' * installing *source* package 'ROCR' ... ** R ** data ** demo ** preparing package for lazy loading Loading required package: gtools Loading required package: gdata gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attaching package: 'gdata' The following object(s) are masked from package:utils : object.size Loading required package: caTools Loading required package: bitops Loading required package: grid Loading required package: KernSmooth KernSmooth 2.23 loaded Copyright M. P. Wand 1997-2009 Attaching package: 'gplots' The following object(s) are masked from package:stats : lowess Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package 'ROCR' * removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR' probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] ROCR package not installing
Hi Mohammed, This didn't work either: Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package ‘ROCR’ * removing ‘/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR’ The downloaded packages are in ‘/tmp/Rtmpn1DjHt/downloaded_packages’ Warning message: In install.packages(ROCR, dep = T) : installation of package 'ROCR' had non-zero exit status thanks Philip -Original Message- From: Mohammed Ouassou [mailto:mohammed.ouas...@statkart.no] Sent: Thursday, 22 November 2012 6:02 PM To: Philip Robinson Cc: r-help@r-project.org Subject: Re: [R] ROCR package not installing try: install.packages(ROCR,dep=T) M.O On to., 2012-11-22 at 16:02 +1000, Philip Robinson wrote: I have tried installing the package (ROCR) with this command: Install.packages(ROCR) And with this command on the command line R CMD INSTALL ROCR_1.0-4.tar.gz But both times I get exactly the same error shown below, I don't understand what is wrong, is this an error in the package code? Thank you Philip probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL ROCR_1.0-4.tar.gz * installing to library '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10' * installing *source* package 'ROCR' ... ** R ** data ** demo ** preparing package for lazy loading Loading required package: gtools Loading required package: gdata gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attaching package: 'gdata' The following object(s) are masked from package:utils : object.size Loading required package: caTools Loading required package: bitops Loading required package: grid Loading required package: KernSmooth KernSmooth 2.23 loaded Copyright M. P. Wand 1997-2009 Attaching package: 'gplots' The following object(s) are masked from package:stats : lowess Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package 'ROCR' * removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR' probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] ROCR package not installing
Very old version. Maybe you should try again after upgrading your version of R (current is 2.15.2). Pascal Le 22/11/2012 18:11, Philip Robinson a écrit : My version is: Linux bioinform08 2.6.32-33-generic #70-Ubuntu SMP Thu Jul 7 21:13:52 UTC 2011 x86_64 GNU/Linux Ubuntu 10.04.3 LTS R version 2.10.1 (2009-12-14) Philip -Original Message- From: Pascal Oettli [mailto:kri...@ymail.com] Sent: Thursday, 22 November 2012 4:20 PM To: Philip Robinson Cc: r-help@r-project.org Subject: Re: [R] ROCR package not installing Hello, What is the version of R you use ? Regards, Pascal Le 22/11/2012 15:02, Philip Robinson a écrit : I have tried installing the package (ROCR) with this command: Install.packages(ROCR) And with this command on the command line R CMD INSTALL ROCR_1.0-4.tar.gz But both times I get exactly the same error shown below, I don't understand what is wrong, is this an error in the package code? Thank you Philip probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL ROCR_1.0-4.tar.gz * installing to library '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10' * installing *source* package 'ROCR' ... ** R ** data ** demo ** preparing package for lazy loading Loading required package: gtools Loading required package: gdata gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attaching package: 'gdata' The following object(s) are masked from package:utils : object.size Loading required package: caTools Loading required package: bitops Loading required package: grid Loading required package: KernSmooth KernSmooth 2.23 loaded Copyright M. P. Wand 1997-2009 Attaching package: 'gplots' The following object(s) are masked from package:stats : lowess Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package 'ROCR' * removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR' probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] ROCR package not installing
I have tried installing the package (ROCR) with this command: Install.packages(ROCR) And with this command on the command line R CMD INSTALL ROCR_1.0-4.tar.gz But both times I get exactly the same error shown below, I don't understand what is wrong, is this an error in the package code? Thank you Philip probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL ROCR_1.0-4.tar.gz * installing to library '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10' * installing *source* package 'ROCR' ... ** R ** data ** demo ** preparing package for lazy loading Loading required package: gtools Loading required package: gdata gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attaching package: 'gdata' The following object(s) are masked from package:utils : object.size Loading required package: caTools Loading required package: bitops Loading required package: grid Loading required package: KernSmooth KernSmooth 2.23 loaded Copyright M. P. Wand 1997-2009 Attaching package: 'gplots' The following object(s) are masked from package:stats : lowess Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package 'ROCR' * removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR' probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] ROCR package not installing
Hello, What is the version of R you use ? Regards, Pascal Le 22/11/2012 15:02, Philip Robinson a écrit : I have tried installing the package (ROCR) with this command: Install.packages(ROCR) And with this command on the command line R CMD INSTALL ROCR_1.0-4.tar.gz But both times I get exactly the same error shown below, I don't understand what is wrong, is this an error in the package code? Thank you Philip probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL ROCR_1.0-4.tar.gz * installing to library '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10' * installing *source* package 'ROCR' ... ** R ** data ** demo ** preparing package for lazy loading Loading required package: gtools Loading required package: gdata gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED. gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED. Attaching package: 'gdata' The following object(s) are masked from package:utils : object.size Loading required package: caTools Loading required package: bitops Loading required package: grid Loading required package: KernSmooth KernSmooth 2.23 loaded Copyright M. P. Wand 1997-2009 Attaching package: 'gplots' The following object(s) are masked from package:stats : lowess Error in setMethod(plot, signature(x = performance, y = missing), : no existing definition for function plot Error : unable to load R code in package 'ROCR' ERROR: lazy loading failed for package 'ROCR' * removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR' probinson@bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
