[R] CSPADE error: system invocation error
Hi Sue Michael, I'm running into the same situation, i first tried everything with my own data and it didn't work, and then i tried with zaki.txt and i got the same error Here is my sessioninfo: sessionInfo() R version 3.0.1 (2013-05-16) Platform: i386-w64-mingw32/i386 (32-bit) locale: [1] LC_COLLATE=French_France.1252 LC_CTYPE=French_France.1252 LC_MONETARY=French_France.1252 LC_NUMERIC=C [5] LC_TIME=French_France.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] arulesSequences_0.2-4 arules_1.0-14 Matrix_1.0-12 lattice_0.20-15 loaded via a namespace (and not attached): [1] grid_3.0.1 tools_3.0.1 Have you guys resolved the problem? Do you know where does it come from? Thank you in advance, Cen -- Privileged/Confidential Information may be contained in this message. If you are not the addressee indicated in this message, you should destroy this message. For more information on WPP's business ethical standards and corporate responsibility policies, please refer to WPP's website. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] CSPADE error: system invocation error
Hi, I am trying to use the CSPADE function as part of the ArulesSequences package. When running with my own data I get a system invocation error, and also get the same when running the built in example with the zaki data: example(cspade) And get the following error: preprocessing ...Error in cspade(zaki, parameter = list(support = 0.4), control = list(verbose = TRUE)) : system invocation failed I read on a site saying that this error comes up when the support specified is too high, however I don't think this should happen with the example? Tried with support = 1e-10 anyway and the same error pops up. I am running R 2.14.2 32-bit in Windows 7... but also downloaded 64-bit and the same error comes up. Have checked the package requirements and all seem to be okay. I have used the read_baskets function and it works fine. Any help would be greatly appreciated Regards Sue This e-mail, including attachments, is intended for the person(s) or company named and may contain confidential and/or legally privileged information. Unauthorised disclosure, copying or use of this information may be unlawful and is prohibited. If you are not the intended recipient, please delete this message and notify the sender. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] CSPADE error: system invocation error
It works fine for me: can you give sessionInfo()? Michael On Tue, Apr 3, 2012 at 9:27 PM, Sue Xu sue...@hollard.com.au wrote: Hi, I am trying to use the CSPADE function as part of the ArulesSequences package. When running with my own data I get a system invocation error, and also get the same when running the built in example with the zaki data: example(cspade) And get the following error: preprocessing ...Error in cspade(zaki, parameter = list(support = 0.4), control = list(verbose = TRUE)) : system invocation failed I read on a site saying that this error comes up when the support specified is too high, however I don't think this should happen with the example? Tried with support = 1e-10 anyway and the same error pops up. I am running R 2.14.2 32-bit in Windows 7... but also downloaded 64-bit and the same error comes up. Have checked the package requirements and all seem to be okay. I have used the read_baskets function and it works fine. Any help would be greatly appreciated Regards Sue This e-mail, including attachments, is intended for the person(s) or company named and may contain confidential and/or legally privileged information. Unauthorised disclosure, copying or use of this information may be unlawful and is prohibited. If you are not the intended recipient, please delete this message and notify the sender. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] CSPADE error: system invocation error
I'm heading to bed now but will try to get a look at this in the morning - forwarding this to R-help so others have a chance of getting to it before me. (Particularly those who know the package better than me) Michael On Apr 4, 2012, at 12:44 AM, Sue Xu sue...@hollard.com.au wrote: Hi Michael, sessionInfo below Cheers Sue sessionInfo() R version 2.14.2 (2012-02-29) Platform: i386-pc-mingw32/i386 (32-bit) locale: [1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252 [3] LC_MONETARY=English_Australia.1252 LC_NUMERIC=C [5] LC_TIME=English_Australia.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] arulesSequences_0.2-1 arules_1.0-7 Matrix_1.0-4 [4] lattice_0.20-0 loaded via a namespace (and not attached): [1] grid_2.14.2 tools_2.14.2 -Original Message- From: R. Michael Weylandt [mailto:michael.weyla...@gmail.com] Sent: Wednesday, 4 April 2012 2:35 PM To: Sue Xu Cc: r-help@r-project.org Subject: Re: [R] CSPADE error: system invocation error It works fine for me: can you give sessionInfo()? Michael On Tue, Apr 3, 2012 at 9:27 PM, Sue Xu sue...@hollard.com.au wrote: Hi, I am trying to use the CSPADE function as part of the ArulesSequences package. When running with my own data I get a system invocation error, and also get the same when running the built in example with the zaki data: example(cspade) And get the following error: preprocessing ...Error in cspade(zaki, parameter = list(support = 0.4), control = list(verbose = TRUE)) : system invocation failed I read on a site saying that this error comes up when the support specified is too high, however I don't think this should happen with the example? Tried with support = 1e-10 anyway and the same error pops up. I am running R 2.14.2 32-bit in Windows 7... but also downloaded 64-bit and the same error comes up. Have checked the package requirements and all seem to be okay. I have used the read_baskets function and it works fine. Any help would be greatly appreciated Regards Sue This e-mail, including attachments, is intended for the person(s) or company named and may contain confidential and/or legally privileged information. Unauthorised disclosure, copying or use of this information may be unlawful and is prohibited. If you are not the intended recipient, please delete this message and notify the sender. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. This e-mail, including attachments, is intended for the person(s) or company named and may contain confidential and/or legally privileged information. Unauthorised disclosure, copying or use of this information may be unlawful and is prohibited. If you are not the intended recipient, please delete this message and notify the sender. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] cspade error
That's a very late answer, but I just ran into the same problem and thought maybe someone else (someone browsing the archives, for instance) would appreciate a tip. There are maybe empty lines in your data file file_name.txt. If you remove them, or remove the corresponding transactions in data_ex, it should work (at least, it works for me). -- View this message in context: http://r.789695.n4.nabble.com/cspade-error-tp3774834p3889448.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] cspade error
Hi, I'm using the cspade function from the arulesSequences package on linux and keep getting the error: Error in makebin(data, file) : 'sid' invalid any information on how to solve this would be much appreciated. Thanks. -- View this message in context: http://r.789695.n4.nabble.com/cspade-error-tp3774834p3774834.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] cspade error
I have a vector with entries like 1,1,2,item1,item2 or 1,2,1,item1 that I save as file_name.txt and then is transformed into a transaction by calling: data_ex - read_baskets(file_name.txt, sep=,, info= c(eventID,sequenceID,SIZE)) as the first first three parts of the entry correspond to the eventID (my customer number), the sequenceID (1 means the first shop for that customer, 2 the second and so on) and the SIZE (the number of items). Then I create the inputs for the cspade function: p - as(list(support=0.8), SPparameter) q - as(list(verbose = TRUE, memsize=3000), SPcontrol) and finally I call cspade: cspade(data_ex, parameter = p, control = q, tmpdir = tempdir()) -- View this message in context: http://r.789695.n4.nabble.com/cspade-error-tp3774834p3774955.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
