Re: [R] hash - extract key values

2015-03-28 Thread Brian Smith
I deleted the 'hash' directory and re-installed (several times!) it, but it
is still wierd..


 sessionInfo()
R version 3.1.2 (2014-10-31)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base

loaded via a namespace (and not attached):
[1] tools_3.1.2
 library(hash)
hash-3.0.1 provided by Decision Patterns

 myhash - hash(key=letters,values=1:26)
 myhash
hash containing 2 key-value pair(s).
  key : a b c d e f g h i j k l m n o p q r s t u v w x y z
  values :  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21
22 23 24 25 26
 keys(myhash)
[1] keyvalues
 myhash$key
 [1] a b c d e f g h i j k l m n o p q
r s t u v w x y z
 myhash$values
 [1]  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
24 25 26
 sessionInfo()
R version 3.1.2 (2014-10-31)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base

other attached packages:
[1] hash_3.0.1

loaded via a namespace (and not attached):
[1] tools_3.1.2


On Sat, Mar 28, 2015 at 5:02 AM, Uwe Ligges lig...@statistik.tu-dortmund.de
 wrote:

 Try to reinstall hash. Sounds like a broken installation.

 Best,
 Uwe Ligges



 On 28.03.2015 07:03, Brian Smith wrote:

 Exactly. Used to work for me, but not anymore. I tried restarting session,
 installing the most recent package of 'hash' etc.

 Here is my sessionInfo():

  sessionInfo()

 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
   [1] grid  parallel  stats4stats graphics  grDevices utils
 datasets  methods   base

 other attached packages:
   [1] mapdata_2.2-3maps_2.3-9   org.Hs.eg.db_3.0.0
 multicore_0.1-7  nlme_3.1-120 Rgraphviz_2.10.0
   [7] biomaRt_2.22.0   topGO_2.18.0 SparseM_1.6
   GO.db_3.0.0  graph_1.44.1 mouse4302.db_3.0.0
 [13] org.Mm.eg.db_3.0.0   RSQLite_1.0.0DBI_0.3.1
   AnnotationDbi_1.28.1 GenomeInfoDb_1.2.4   IRanges_2.0.1
 [19] S4Vectors_0.4.0  Biobase_2.26.0   BiocGenerics_0.12.1
   XML_3.98-1.1 gap_1.1-12   som_0.3-5
 [25] pvclust_1.3-2foreign_0.8-63   hash_3.0.1

 loaded via a namespace (and not attached):
 [1] bitops_1.0-6lattice_0.20-29 RCurl_1.95-4.5  tools_3.1.2




 On Fri, Mar 27, 2015 at 9:54 PM, Boris Steipe boris.ste...@utoronto.ca
 wrote:

  Works for me :

  library(hash)

 hash-2.2.6 provided by Decision Patterns

  hx - hash( c('a','b','c'), 1:3 )
 class(hx)

 [1] hash
 attr(,package)
 [1] hash

 hx$a

 [1] 1

 keys(hx)

 [1] a b c


 Maybe restart your session? Clear your workspace? Upgrade?

 B.





 On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com wrote:

  Hi,

 I was trying to use hash, but can't seem to get the keys from the hash.
 According to the hash documentation ('hash' package pdf, the following
 should work:

  hx - hash( c('a','b','c'), 1:3 )
 class(hx)

 [1] hash
 attr(,package)
 [1] hash

 hx$a

 [1] 1

 keys(hx)

 Error in (function (classes, fdef, mtable)  :
   unable to find an inherited method for function ‘keys’ for signature
 ‘hash’

 How can I get the keys for my hash?

 thanks!

[[alternative HTML version deleted]]

 __
 R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide

 http://www.R-project.org/posting-guide.html

 and provide commented, minimal, self-contained, reproducible code.




 [[alternative HTML version deleted]]

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 R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/
 posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.



[[alternative HTML version deleted]]

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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] hash - extract key values

2015-03-28 Thread Brian Smith
Hi William,

That's the point - the 'keys()' doesn't seem to work..


On Sat, Mar 28, 2015 at 7:36 PM, William Dunlap wdun...@tibco.com wrote:

 Try using the plural 'keys' instead of 'key' (as help(hash) says):
yourhash - hash(keys=letters, values=1:26)
 Then there will be 26 items in the hash table and keys(yourhash)
 will return the 26 lowercase letters.  Is that what you want?

 Bill Dunlap
 TIBCO Software
 wdunlap tibco.com

 On Sat, Mar 28, 2015 at 2:56 PM, Brian Smith bsmith030...@gmail.com
 wrote:

 I deleted the 'hash' directory and re-installed (several times!) it, but
 it
 is still wierd..


  sessionInfo()
 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base

 loaded via a namespace (and not attached):
 [1] tools_3.1.2
  library(hash)
 hash-3.0.1 provided by Decision Patterns

  myhash - hash(key=letters,values=1:26)
  myhash
 hash containing 2 key-value pair(s).
   key : a b c d e f g h i j k l m n o p q r s t u v w x y z
   values :  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21
 22 23 24 25 26
  keys(myhash)
 [1] keyvalues
  myhash$key
  [1] a b c d e f g h i j k l m n o p q
 r s t u v w x y z
  myhash$values
  [1]  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
 24 25 26
  sessionInfo()
 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base

 other attached packages:
 [1] hash_3.0.1

 loaded via a namespace (and not attached):
 [1] tools_3.1.2
 

 On Sat, Mar 28, 2015 at 5:02 AM, Uwe Ligges 
 lig...@statistik.tu-dortmund.de
  wrote:

  Try to reinstall hash. Sounds like a broken installation.
 
  Best,
  Uwe Ligges
 
 
 
  On 28.03.2015 07:03, Brian Smith wrote:
 
  Exactly. Used to work for me, but not anymore. I tried restarting
 session,
  installing the most recent package of 'hash' etc.
 
  Here is my sessionInfo():
 
   sessionInfo()
 
  R version 3.1.2 (2014-10-31)
  Platform: x86_64-apple-darwin10.8.0 (64-bit)
 
  locale:
  [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
  attached base packages:
[1] grid  parallel  stats4stats graphics  grDevices utils
  datasets  methods   base
 
  other attached packages:
[1] mapdata_2.2-3maps_2.3-9   org.Hs.eg.db_3.0.0
  multicore_0.1-7  nlme_3.1-120 Rgraphviz_2.10.0
[7] biomaRt_2.22.0   topGO_2.18.0 SparseM_1.6
GO.db_3.0.0  graph_1.44.1 mouse4302.db_3.0.0
  [13] org.Mm.eg.db_3.0.0   RSQLite_1.0.0DBI_0.3.1
AnnotationDbi_1.28.1 GenomeInfoDb_1.2.4   IRanges_2.0.1
  [19] S4Vectors_0.4.0  Biobase_2.26.0   BiocGenerics_0.12.1
XML_3.98-1.1 gap_1.1-12   som_0.3-5
  [25] pvclust_1.3-2foreign_0.8-63   hash_3.0.1
 
  loaded via a namespace (and not attached):
  [1] bitops_1.0-6lattice_0.20-29 RCurl_1.95-4.5  tools_3.1.2
 
 
 
 
  On Fri, Mar 27, 2015 at 9:54 PM, Boris Steipe 
 boris.ste...@utoronto.ca
  wrote:
 
   Works for me :
 
   library(hash)
 
  hash-2.2.6 provided by Decision Patterns
 
   hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 
  [1] hash
  attr(,package)
  [1] hash
 
  hx$a
 
  [1] 1
 
  keys(hx)
 
  [1] a b c
 
 
  Maybe restart your session? Clear your workspace? Upgrade?
 
  B.
 
 
 
 
 
  On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com
 wrote:
 
   Hi,
 
  I was trying to use hash, but can't seem to get the keys from the
 hash.
  According to the hash documentation ('hash' package pdf, the
 following
  should work:
 
   hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 
  [1] hash
  attr(,package)
  [1] hash
 
  hx$a
 
  [1] 1
 
  keys(hx)
 
  Error in (function (classes, fdef, mtable)  :
unable to find an inherited method for function ‘keys’ for
 signature
  ‘hash’
 
  How can I get the keys for my hash?
 
  thanks!
 
 [[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide
 
  http://www.R-project.org/posting-guide.html
 
  and provide commented, minimal, self-contained, reproducible code.
 
 
 
 
  [[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide http://www.R-project.org/
  posting-guide.html
  and provide commented, minimal, self-contained, reproducible code.
 
 

 [[alternative HTML version deleted]]

 

Re: [R] hash - extract key values

2015-03-28 Thread William Dunlap
What part of the following does not work as expected?
z - hash(keys=letters[1:5], values=lapply(1:5,seq_len))
keys(z)
   [1] a b c d e
z$b
   [1] 1 2


Bill Dunlap
TIBCO Software
wdunlap tibco.com

On Sat, Mar 28, 2015 at 4:45 PM, Brian Smith bsmith030...@gmail.com wrote:

 Hi William,

 That's the point - the 'keys()' doesn't seem to work..


 On Sat, Mar 28, 2015 at 7:36 PM, William Dunlap wdun...@tibco.com wrote:

 Try using the plural 'keys' instead of 'key' (as help(hash) says):
yourhash - hash(keys=letters, values=1:26)
 Then there will be 26 items in the hash table and keys(yourhash)
 will return the 26 lowercase letters.  Is that what you want?

 Bill Dunlap
 TIBCO Software
 wdunlap tibco.com

 On Sat, Mar 28, 2015 at 2:56 PM, Brian Smith bsmith030...@gmail.com
 wrote:

 I deleted the 'hash' directory and re-installed (several times!) it, but
 it
 is still wierd..


  sessionInfo()
 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base

 loaded via a namespace (and not attached):
 [1] tools_3.1.2
  library(hash)
 hash-3.0.1 provided by Decision Patterns

  myhash - hash(key=letters,values=1:26)
  myhash
 hash containing 2 key-value pair(s).
   key : a b c d e f g h i j k l m n o p q r s t u v w x y z
   values :  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21
 22 23 24 25 26
  keys(myhash)
 [1] keyvalues
  myhash$key
  [1] a b c d e f g h i j k l m n o p q
 r s t u v w x y z
  myhash$values
  [1]  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
 24 25 26
  sessionInfo()
 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base

 other attached packages:
 [1] hash_3.0.1

 loaded via a namespace (and not attached):
 [1] tools_3.1.2
 

 On Sat, Mar 28, 2015 at 5:02 AM, Uwe Ligges 
 lig...@statistik.tu-dortmund.de
  wrote:

  Try to reinstall hash. Sounds like a broken installation.
 
  Best,
  Uwe Ligges
 
 
 
  On 28.03.2015 07:03, Brian Smith wrote:
 
  Exactly. Used to work for me, but not anymore. I tried restarting
 session,
  installing the most recent package of 'hash' etc.
 
  Here is my sessionInfo():
 
   sessionInfo()
 
  R version 3.1.2 (2014-10-31)
  Platform: x86_64-apple-darwin10.8.0 (64-bit)
 
  locale:
  [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
  attached base packages:
[1] grid  parallel  stats4stats graphics  grDevices
 utils
  datasets  methods   base
 
  other attached packages:
[1] mapdata_2.2-3maps_2.3-9   org.Hs.eg.db_3.0.0
  multicore_0.1-7  nlme_3.1-120 Rgraphviz_2.10.0
[7] biomaRt_2.22.0   topGO_2.18.0 SparseM_1.6
GO.db_3.0.0  graph_1.44.1 mouse4302.db_3.0.0
  [13] org.Mm.eg.db_3.0.0   RSQLite_1.0.0DBI_0.3.1
AnnotationDbi_1.28.1 GenomeInfoDb_1.2.4   IRanges_2.0.1
  [19] S4Vectors_0.4.0  Biobase_2.26.0   BiocGenerics_0.12.1
XML_3.98-1.1 gap_1.1-12   som_0.3-5
  [25] pvclust_1.3-2foreign_0.8-63   hash_3.0.1
 
  loaded via a namespace (and not attached):
  [1] bitops_1.0-6lattice_0.20-29 RCurl_1.95-4.5  tools_3.1.2
 
 
 
 
  On Fri, Mar 27, 2015 at 9:54 PM, Boris Steipe 
 boris.ste...@utoronto.ca
  wrote:
 
   Works for me :
 
   library(hash)
 
  hash-2.2.6 provided by Decision Patterns
 
   hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 
  [1] hash
  attr(,package)
  [1] hash
 
  hx$a
 
  [1] 1
 
  keys(hx)
 
  [1] a b c
 
 
  Maybe restart your session? Clear your workspace? Upgrade?
 
  B.
 
 
 
 
 
  On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com
 wrote:
 
   Hi,
 
  I was trying to use hash, but can't seem to get the keys from the
 hash.
  According to the hash documentation ('hash' package pdf, the
 following
  should work:
 
   hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 
  [1] hash
  attr(,package)
  [1] hash
 
  hx$a
 
  [1] 1
 
  keys(hx)
 
  Error in (function (classes, fdef, mtable)  :
unable to find an inherited method for function ‘keys’ for
 signature
  ‘hash’
 
  How can I get the keys for my hash?
 
  thanks!
 
 [[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide
 
  http://www.R-project.org/posting-guide.html
 
  and provide commented, minimal, self-contained, reproducible code.
 
 
 
 
  [[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, 

Re: [R] hash - extract key values

2015-03-28 Thread William Dunlap
Try using the plural 'keys' instead of 'key' (as help(hash) says):
   yourhash - hash(keys=letters, values=1:26)
Then there will be 26 items in the hash table and keys(yourhash)
will return the 26 lowercase letters.  Is that what you want?

Bill Dunlap
TIBCO Software
wdunlap tibco.com

On Sat, Mar 28, 2015 at 2:56 PM, Brian Smith bsmith030...@gmail.com wrote:

 I deleted the 'hash' directory and re-installed (several times!) it, but it
 is still wierd..


  sessionInfo()
 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base

 loaded via a namespace (and not attached):
 [1] tools_3.1.2
  library(hash)
 hash-3.0.1 provided by Decision Patterns

  myhash - hash(key=letters,values=1:26)
  myhash
 hash containing 2 key-value pair(s).
   key : a b c d e f g h i j k l m n o p q r s t u v w x y z
   values :  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21
 22 23 24 25 26
  keys(myhash)
 [1] keyvalues
  myhash$key
  [1] a b c d e f g h i j k l m n o p q
 r s t u v w x y z
  myhash$values
  [1]  1  2  3  4  5  6  7  8  9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
 24 25 26
  sessionInfo()
 R version 3.1.2 (2014-10-31)
 Platform: x86_64-apple-darwin10.8.0 (64-bit)

 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base

 other attached packages:
 [1] hash_3.0.1

 loaded via a namespace (and not attached):
 [1] tools_3.1.2
 

 On Sat, Mar 28, 2015 at 5:02 AM, Uwe Ligges 
 lig...@statistik.tu-dortmund.de
  wrote:

  Try to reinstall hash. Sounds like a broken installation.
 
  Best,
  Uwe Ligges
 
 
 
  On 28.03.2015 07:03, Brian Smith wrote:
 
  Exactly. Used to work for me, but not anymore. I tried restarting
 session,
  installing the most recent package of 'hash' etc.
 
  Here is my sessionInfo():
 
   sessionInfo()
 
  R version 3.1.2 (2014-10-31)
  Platform: x86_64-apple-darwin10.8.0 (64-bit)
 
  locale:
  [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 
  attached base packages:
[1] grid  parallel  stats4stats graphics  grDevices utils
  datasets  methods   base
 
  other attached packages:
[1] mapdata_2.2-3maps_2.3-9   org.Hs.eg.db_3.0.0
  multicore_0.1-7  nlme_3.1-120 Rgraphviz_2.10.0
[7] biomaRt_2.22.0   topGO_2.18.0 SparseM_1.6
GO.db_3.0.0  graph_1.44.1 mouse4302.db_3.0.0
  [13] org.Mm.eg.db_3.0.0   RSQLite_1.0.0DBI_0.3.1
AnnotationDbi_1.28.1 GenomeInfoDb_1.2.4   IRanges_2.0.1
  [19] S4Vectors_0.4.0  Biobase_2.26.0   BiocGenerics_0.12.1
XML_3.98-1.1 gap_1.1-12   som_0.3-5
  [25] pvclust_1.3-2foreign_0.8-63   hash_3.0.1
 
  loaded via a namespace (and not attached):
  [1] bitops_1.0-6lattice_0.20-29 RCurl_1.95-4.5  tools_3.1.2
 
 
 
 
  On Fri, Mar 27, 2015 at 9:54 PM, Boris Steipe boris.ste...@utoronto.ca
 
  wrote:
 
   Works for me :
 
   library(hash)
 
  hash-2.2.6 provided by Decision Patterns
 
   hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 
  [1] hash
  attr(,package)
  [1] hash
 
  hx$a
 
  [1] 1
 
  keys(hx)
 
  [1] a b c
 
 
  Maybe restart your session? Clear your workspace? Upgrade?
 
  B.
 
 
 
 
 
  On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com
 wrote:
 
   Hi,
 
  I was trying to use hash, but can't seem to get the keys from the
 hash.
  According to the hash documentation ('hash' package pdf, the following
  should work:
 
   hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 
  [1] hash
  attr(,package)
  [1] hash
 
  hx$a
 
  [1] 1
 
  keys(hx)
 
  Error in (function (classes, fdef, mtable)  :
unable to find an inherited method for function ‘keys’ for signature
  ‘hash’
 
  How can I get the keys for my hash?
 
  thanks!
 
 [[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide
 
  http://www.R-project.org/posting-guide.html
 
  and provide commented, minimal, self-contained, reproducible code.
 
 
 
 
  [[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide http://www.R-project.org/
  posting-guide.html
  and provide commented, minimal, self-contained, reproducible code.
 
 

 [[alternative HTML version deleted]]

 __
 R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting 

Re: [R] hash - extract key values

2015-03-28 Thread Brian Smith
Exactly. Used to work for me, but not anymore. I tried restarting session,
installing the most recent package of 'hash' etc.

Here is my sessionInfo():

 sessionInfo()
R version 3.1.2 (2014-10-31)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
 [1] grid  parallel  stats4stats graphics  grDevices utils
datasets  methods   base

other attached packages:
 [1] mapdata_2.2-3maps_2.3-9   org.Hs.eg.db_3.0.0
multicore_0.1-7  nlme_3.1-120 Rgraphviz_2.10.0
 [7] biomaRt_2.22.0   topGO_2.18.0 SparseM_1.6
 GO.db_3.0.0  graph_1.44.1 mouse4302.db_3.0.0
[13] org.Mm.eg.db_3.0.0   RSQLite_1.0.0DBI_0.3.1
 AnnotationDbi_1.28.1 GenomeInfoDb_1.2.4   IRanges_2.0.1
[19] S4Vectors_0.4.0  Biobase_2.26.0   BiocGenerics_0.12.1
 XML_3.98-1.1 gap_1.1-12   som_0.3-5
[25] pvclust_1.3-2foreign_0.8-63   hash_3.0.1

loaded via a namespace (and not attached):
[1] bitops_1.0-6lattice_0.20-29 RCurl_1.95-4.5  tools_3.1.2




On Fri, Mar 27, 2015 at 9:54 PM, Boris Steipe boris.ste...@utoronto.ca
wrote:

 Works for me :

  library(hash)
 hash-2.2.6 provided by Decision Patterns

  hx - hash( c('a','b','c'), 1:3 )
  class(hx)
 [1] hash
 attr(,package)
 [1] hash
  hx$a
 [1] 1
  keys(hx)
 [1] a b c


 Maybe restart your session? Clear your workspace? Upgrade?

 B.





 On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com wrote:

  Hi,
 
  I was trying to use hash, but can't seem to get the keys from the hash.
  According to the hash documentation ('hash' package pdf, the following
  should work:
 
  hx - hash( c('a','b','c'), 1:3 )
  class(hx)
  [1] hash
  attr(,package)
  [1] hash
  hx$a
  [1] 1
  keys(hx)
  Error in (function (classes, fdef, mtable)  :
   unable to find an inherited method for function ‘keys’ for signature
  ‘hash’
 
  How can I get the keys for my hash?
 
  thanks!
 
[[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide
 http://www.R-project.org/posting-guide.html
  and provide commented, minimal, self-contained, reproducible code.



[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] hash - extract key values

2015-03-28 Thread Uwe Ligges

Try to reinstall hash. Sounds like a broken installation.

Best,
Uwe Ligges


On 28.03.2015 07:03, Brian Smith wrote:

Exactly. Used to work for me, but not anymore. I tried restarting session,
installing the most recent package of 'hash' etc.

Here is my sessionInfo():


sessionInfo()

R version 3.1.2 (2014-10-31)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
  [1] grid  parallel  stats4stats graphics  grDevices utils
datasets  methods   base

other attached packages:
  [1] mapdata_2.2-3maps_2.3-9   org.Hs.eg.db_3.0.0
multicore_0.1-7  nlme_3.1-120 Rgraphviz_2.10.0
  [7] biomaRt_2.22.0   topGO_2.18.0 SparseM_1.6
  GO.db_3.0.0  graph_1.44.1 mouse4302.db_3.0.0
[13] org.Mm.eg.db_3.0.0   RSQLite_1.0.0DBI_0.3.1
  AnnotationDbi_1.28.1 GenomeInfoDb_1.2.4   IRanges_2.0.1
[19] S4Vectors_0.4.0  Biobase_2.26.0   BiocGenerics_0.12.1
  XML_3.98-1.1 gap_1.1-12   som_0.3-5
[25] pvclust_1.3-2foreign_0.8-63   hash_3.0.1

loaded via a namespace (and not attached):
[1] bitops_1.0-6lattice_0.20-29 RCurl_1.95-4.5  tools_3.1.2




On Fri, Mar 27, 2015 at 9:54 PM, Boris Steipe boris.ste...@utoronto.ca
wrote:


Works for me :


library(hash)

hash-2.2.6 provided by Decision Patterns


hx - hash( c('a','b','c'), 1:3 )
class(hx)

[1] hash
attr(,package)
[1] hash

hx$a

[1] 1

keys(hx)

[1] a b c


Maybe restart your session? Clear your workspace? Upgrade?

B.





On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com wrote:


Hi,

I was trying to use hash, but can't seem to get the keys from the hash.
According to the hash documentation ('hash' package pdf, the following
should work:


hx - hash( c('a','b','c'), 1:3 )
class(hx)

[1] hash
attr(,package)
[1] hash

hx$a

[1] 1

keys(hx)

Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘keys’ for signature
‘hash’

How can I get the keys for my hash?

thanks!

   [[alternative HTML version deleted]]

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide

http://www.R-project.org/posting-guide.html

and provide commented, minimal, self-contained, reproducible code.





[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.



__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

[R] hash - extract key values

2015-03-27 Thread Brian Smith
Hi,

I was trying to use hash, but can't seem to get the keys from the hash.
According to the hash documentation ('hash' package pdf, the following
should work:

 hx - hash( c('a','b','c'), 1:3 )
 class(hx)
[1] hash
attr(,package)
[1] hash
 hx$a
[1] 1
 keys(hx)
Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘keys’ for signature
‘hash’

How can I get the keys for my hash?

thanks!

[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] hash - extract key values

2015-03-27 Thread Boris Steipe
Works for me :

 library(hash)
hash-2.2.6 provided by Decision Patterns

 hx - hash( c('a','b','c'), 1:3 )
 class(hx)
[1] hash
attr(,package)
[1] hash
 hx$a
[1] 1
 keys(hx)
[1] a b c


Maybe restart your session? Clear your workspace? Upgrade?

B.





On Mar 27, 2015, at 7:39 PM, Brian Smith bsmith030...@gmail.com wrote:

 Hi,
 
 I was trying to use hash, but can't seem to get the keys from the hash.
 According to the hash documentation ('hash' package pdf, the following
 should work:
 
 hx - hash( c('a','b','c'), 1:3 )
 class(hx)
 [1] hash
 attr(,package)
 [1] hash
 hx$a
 [1] 1
 keys(hx)
 Error in (function (classes, fdef, mtable)  :
  unable to find an inherited method for function ‘keys’ for signature
 ‘hash’
 
 How can I get the keys for my hash?
 
 thanks!
 
   [[alternative HTML version deleted]]
 
 __
 R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.