Re: [R] how to increase the limit for max.print in R

2012-04-11 Thread Gav 

Hi Pooja,

You must use options command, something like this

options(max.print=5.5E5)

For more information type? ?options

-- 
Bernardo Rangel Tura, M.D,MPH,Ph.D
National Institute of Cardiology
Brazil

Thanks Bernardo;
cut and paste above line done..

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[R] how to increase the limit for max.print in R

2009-03-31 Thread pooja arora 
Hi All,

 

I am using DNAcopy package in R for copy number analysis of 500K chip.

The final output which I get from DNA copy is too big to be printed in a
file.

So I am getting an error as reached getOption(max.print) -- omitted
475569 rows  

Can somebody please provide me the pointers with how to increase the limit
for max.print .

 

Thanks,

 

Pooja


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Re: [R] how to increase the limit for max.print in R

2009-03-31 Thread Bernardo Rangel Tura 
On Tue, 2009-03-31 at 14:47 +0530, pooja arora wrote:
 Hi All,
 
  
 
 I am using DNAcopy package in R for copy number analysis of 500K chip.
 
 The final output which I get from DNA copy is too big to be printed in a
 file.
 
 So I am getting an error as reached getOption(max.print) -- omitted
 475569 rows  
 
 Can somebody please provide me the pointers with how to increase the limit
 for max.print .
 
  
 
 Thanks,
 
  
 
 Pooja

Hi Pooja,

You must use options command, something like this

options(max.print=5.5E5)

For more information type? ?options

-- 
Bernardo Rangel Tura, M.D,MPH,Ph.D
National Institute of Cardiology
Brazil

__
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https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] how to increase the limit for max.print in R

2009-03-31 Thread pooja arora 
Thanks, it Worked.
Do you have any idea how much is the max limit for max.print


Thanks and Regards,
Pooja Arora | Associate Software Engineer- Washu-caB2B | Persistent Systems
Limited
pooja_ar...@persistent.co.in  | Cell: +91 9923223668 | Tel: +91 (20) 3023
4007
Innovation in software product design, development and delivery-
www.persistentsys.com


-Original Message-
From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On
Behalf Of Bernardo Rangel Tura
Sent: Tuesday, March 31, 2009 2:59 PM
To: r-help@r-project.org
Subject: Re: [R] how to increase the limit for max.print in R

On Tue, 2009-03-31 at 14:47 +0530, pooja arora wrote:
 Hi All,
 
  
 
 I am using DNAcopy package in R for copy number analysis of 500K chip.
 
 The final output which I get from DNA copy is too big to be printed in a
 file.
 
 So I am getting an error as reached getOption(max.print) -- omitted
 475569 rows  
 
 Can somebody please provide me the pointers with how to increase the limit
 for max.print .
 
  
 
 Thanks,
 
  
 
 Pooja

Hi Pooja,

You must use options command, something like this

options(max.print=5.5E5)

For more information type? ?options

-- 
Bernardo Rangel Tura, M.D,MPH,Ph.D
National Institute of Cardiology
Brazil

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


DISCLAIMER\ ==\ \ ...{{dropped:4}}

__
R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] how to increase the limit for max.print in R

2009-03-31 Thread Bernardo Rangel Tura 
On Tue, 2009-03-31 at 15:51 +0530, pooja arora wrote:
 Thanks, it Worked.
 Do you have any idea how much is the max limit for max.print
 
 
 Thanks and Regards,
 Pooja Arora 

Hi Pooja,

In this case max is;

options(max.print=.Machine$double.xmax)

In my case I have a compiled R 2.8.1 in AMD phenom using Ubuntu 8.10 AMD
64 

 .Machine$double.xmax
[1] 1.797693e+308


-- 
Bernardo Rangel Tura, M.D,MPH,Ph.D
National Institute of Cardiology
Brazil

__
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] how to increase the limit for max.print in R

2009-03-31 Thread pooja arora 
Hey ,

Thanks for the command
I tried the same function as u mentioned 
I got a warning like 
Warning message:
NAs introduced by coercion  
Any pointers what does that mean?

I am using a 64 bit Linux(red hat) machine

Thanks and Regards,
Pooja Arora 


-Original Message-
From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On
Behalf Of Bernardo Rangel Tura
Sent: Wednesday, April 01, 2009 5:48 AM
To: r-help@r-project.org
Subject: Re: [R] how to increase the limit for max.print in R

On Tue, 2009-03-31 at 15:51 +0530, pooja arora wrote:
 Thanks, it Worked.
 Do you have any idea how much is the max limit for max.print
 
 
 Thanks and Regards,
 Pooja Arora 

Hi Pooja,

In this case max is;

options(max.print=.Machine$double.xmax)

In my case I have a compiled R 2.8.1 in AMD phenom using Ubuntu 8.10 AMD
64 

 .Machine$double.xmax
[1] 1.797693e+308


-- 
Bernardo Rangel Tura, M.D,MPH,Ph.D
National Institute of Cardiology
Brazil

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


DISCLAIMER\ ==\ \ ...{{dropped:4}}

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.