Re: [R] install rJava in Ubuntu 11.10
John Kane Kingston ON Canada > -Original Message- > From: e...@debian.org > Sent: Sat, 25 Feb 2012 06:44:33 -0600 > To: jrkrid...@inbox.com > Subject: Re: [R] install rJava in Ubuntu 11.10 > > > On 24 February 2012 at 10:32, John Kane wrote: > | I am trying to install rJava on a WUBI Ubuntu 11.10 installation of R > with no luck. I was originally trying to install the iplots package and > encountered this rJava problem. > > Just install the existing binary package, eg via > > sudo apt-get install r-cran-rjava > > as rJava is packaged and ready-to-use. > > Questions for Debian, Ubuntu and related distros are best asked on the > R-SIG-Debian list. > > Dirk > Thanks, this worked beautifully. Given my level of knowledge of Linux I hardly even knew that Ubuntu was a Debian derivative. and I am just begining to discover sudo. Thanks again. Publish your photos in seconds for FREE TRY IM TOOLPACK at http://www.imtoolpack.com/default.aspx?rc=if4 __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] install rJava in Ubuntu 11.10
On 24 February 2012 at 10:32, John Kane wrote: | I am trying to install rJava on a WUBI Ubuntu 11.10 installation of R with no luck. I was originally trying to install the iplots package and encountered this rJava problem. Just install the existing binary package, eg via sudo apt-get install r-cran-rjava as rJava is packaged and ready-to-use. Questions for Debian, Ubuntu and related distros are best asked on the R-SIG-Debian list. Dirk -- "Outside of a dog, a book is a man's best friend. Inside of a dog, it is too dark to read." -- Groucho Marx __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] install rJava in Ubuntu 11.10
As a Linux user, I know you are not running exactly the same Java as on
windows. It exists some copyright issues which prevent you to run Sun Java on
your Linux box.
As shown, you are running in fact openJDK. If result is the same for you, being
able to run Java, it is not the same for most apps.
Install folders are different, and I guess R cannot find the right place for
your Java environment.
Try to google more on this issue (Java on Linux openJDK install folder), or
anything about "building Android on Linux"( same problem as Android needs
java). There is something you could try: add the openJDK path in your
environment.
Hope this help.
Arnaud Gaboury
A2CT2 Ltd.
-Original Message-
From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On
Behalf Of John Kane
Sent: vendredi 24 février 2012 19:32
To: r-help@r-project.org
Subject: [R] install rJava in Ubuntu 11.10
I am trying to install rJava on a WUBI Ubuntu 11.10 installation of R with no
luck. I was originally trying to install the iplots package and encountered
this rJava problem.
Code used:
install.packages("rJava")
(CRAN mirrors --Canada(ON) and Canada(QC2)
I installed iplots with no problem on Windows 7.
I know just about zero about Ubuntu or Linux in general so I have no idea what
I am doing.
Any suggestions would be gratefully received.
I am getting the error/warning messages below.
=
Cannot compile a simple JNI program. See config.log for details.
Make sure you have Java Development Kit installed and correctly registered in R.
If in doubt, re-run "R CMD javareconf" as root.
ERROR: configuration failed for package ‘rJava’
* removing ‘/home/john/R/i686-pc-linux-gnu-library/2.13/rJava’
The downloaded packages are in
‘/tmp/RtmphfnJ62/downloaded_packages’
Warning message:
In install.packages("rJava") :
installation of package 'rJava' had non-zero exit status
=
EXISTING JAVA INSTALLAION
john@ubuntu:~$ java -version
java version "1.6.0_23"
OpenJDK Runtime Environment (IcedTea6 1.11pre) (6b23~pre11-0ubuntu1.11.10.1)
OpenJDK Client VM (build 20.0-b11, mixed mode, sharing)
===
I have re-run "R CMD javareconf" as root.
Does the R CMC javareconf need something added?
(i.e. R CMD javaconf xxx)
Do I really need a Java Development Kit installed?
sessionInfo()
R version 2.13.1 (2011-07-08)
Platform: i686-pc-linux-gnu (32-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
Publish your photos in seconds for FREE
TRY IM TOOLPACK at http://www.imtoolpack.com/default.aspx?rc=if4
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] install rJava in Ubuntu 11.10
I am trying to install rJava on a WUBI Ubuntu 11.10 installation of R with no
luck. I was originally trying to install the iplots package and encountered
this rJava problem.
Code used:
install.packages("rJava")
(CRAN mirrors --Canada(ON) and Canada(QC2)
I installed iplots with no problem on Windows 7.
I know just about zero about Ubuntu or Linux in general so I have no idea what
I am doing.
Any suggestions would be gratefully received.
I am getting the error/warning messages below.
=
Cannot compile a simple JNI program. See config.log for details.
Make sure you have Java Development Kit installed and correctly registered in R.
If in doubt, re-run "R CMD javareconf" as root.
ERROR: configuration failed for package ‘rJava’
* removing ‘/home/john/R/i686-pc-linux-gnu-library/2.13/rJava’
The downloaded packages are in
‘/tmp/RtmphfnJ62/downloaded_packages’
Warning message:
In install.packages("rJava") :
installation of package 'rJava' had non-zero exit status
=
EXISTING JAVA INSTALLAION
john@ubuntu:~$ java -version
java version "1.6.0_23"
OpenJDK Runtime Environment (IcedTea6 1.11pre) (6b23~pre11-0ubuntu1.11.10.1)
OpenJDK Client VM (build 20.0-b11, mixed mode, sharing)
===
I have re-run "R CMD javareconf" as root.
Does the R CMC javareconf need something added?
(i.e. R CMD javaconf xxx)
Do I really need a Java Development Kit installed?
sessionInfo()
R version 2.13.1 (2011-07-08)
Platform: i686-pc-linux-gnu (32-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
Publish your photos in seconds for FREE
TRY IM TOOLPACK at http://www.imtoolpack.com/default.aspx?rc=if4
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
