Re: [R] padding bug in lattice/levelplot
Thanks for the rapid response Deepayan -- that's what I was looking for. Thanks also for your ongoing support of lattice, it's very much appreciated! Paul Quoting Deepayan Sarkar [EMAIL PROTECTED]: On 10/16/08, Paul Boutros [EMAIL PROTECTED] wrote: Hello, I have encountered some unexpected behaviour with levelplot that may simply be a misunderstanding on my part. If I create a levelplot from a matrix with named columns, some padding space appears at the top and bottom of the heatmap. Here is an example, [...] This is because the named columns get treated as a factor, and cause the corresponding axis annotation code to be triggered. This isn't easy to fix without major changes. A simple workaround is to change the padding for factors in the call to levelplot: levelplot(data, lattice.options = list(axis.padding = list(factor = 0.5))) It may make sense for this to happen by default; I'll check if that has any potential drawbacks. -Deepayan __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] padding bug in lattice/levelplot
Hello,
I have encountered some unexpected behaviour with levelplot that may
simply be a misunderstanding on my part.
If I create a levelplot from a matrix with named columns, some
padding space appears at the top and bottom of the heatmap. Here is
an example, and I've used panel.fill to make the space I'm speaking of
evident (in green).
##
library(lattice);
library(latticeExtra);
data - matrix(
nrow = 5,
ncol = 2,
data = rnorm(10)
);
colnames(data) - c(Col1, Col2);
levelplot(
data,
panel = function(...) {
panel.fill(col = green)
panel.levelplot(...);
},
aspect = fill,
scales = list(
x = list(
labels = NULL,
tck = c(0,0)
),
y = list(
cex = 3
)
),
xlab = '',
ylab = ''
);
##
If I now remove the column names and run the same code, this padding
space disappears.
##
colnames(data) - NULL;
levelplot(
data,
panel = function(...) {
panel.fill(col = green)
panel.levelplot(...);
},
aspect = fill,
scales = list(
x = list(
labels = NULL,
tck = c(0,0)
),
y = list(
cex = 3
)
),
xlab = '',
ylab = ''
);
##
I am looking to create a levelplot that uses the entire area (like the
second example) but that has labeled rows (like the first). I'm very
confused about what's causing this padding, or where to look to remove
it. I attempted:
scale = list(x = list(axs = r), y = list(axs = r))
and that did not alter things.
Here is my system information:
sessionInfo();
R version 2.7.2 (2008-08-25)
i386-pc-mingw32
locale:
LC_COLLATE=English_United States.1252;LC_CTYPE=English_United
States.1252;LC_MONETARY=English_United
States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] latticeExtra_0.5-2 RColorBrewer_1.0-2 lattice_0.17-15
loaded via a namespace (and not attached):
[1] grid_2.7.2
Any help/suggestions are very much appreciated,
Paul
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Re: [R] padding bug in lattice/levelplot
On 10/16/08, Paul Boutros [EMAIL PROTECTED] wrote: Hello, I have encountered some unexpected behaviour with levelplot that may simply be a misunderstanding on my part. If I create a levelplot from a matrix with named columns, some padding space appears at the top and bottom of the heatmap. Here is an example, [...] This is because the named columns get treated as a factor, and cause the corresponding axis annotation code to be triggered. This isn't easy to fix without major changes. A simple workaround is to change the padding for factors in the call to levelplot: levelplot(data, lattice.options = list(axis.padding = list(factor = 0.5))) It may make sense for this to happen by default; I'll check if that has any potential drawbacks. -Deepayan __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
